Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_P06
         (84 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.     44   8e-07
AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450 CY...    23   1.3  

>L36067-1|AAA29362.1|  229|Anopheles gambiae polyubiquitin protein.
          Length = 229

 Score = 43.6 bits (98), Expect = 8e-07
 Identities = 19/21 (90%), Positives = 21/21 (100%)
 Frame = +1

Query: 22  RRLIFAGKQLKDGRTLSDYNI 84
           +RLIFAGKQL+DGRTLSDYNI
Sbjct: 41  QRLIFAGKQLEDGRTLSDYNI 61



 Score = 43.6 bits (98), Expect = 8e-07
 Identities = 19/21 (90%), Positives = 21/21 (100%)
 Frame = +1

Query: 22  RRLIFAGKQLKDGRTLSDYNI 84
           +RLIFAGKQL+DGRTLSDYNI
Sbjct: 117 QRLIFAGKQLEDGRTLSDYNI 137



 Score = 43.6 bits (98), Expect = 8e-07
 Identities = 19/21 (90%), Positives = 21/21 (100%)
 Frame = +1

Query: 22  RRLIFAGKQLKDGRTLSDYNI 84
           +RLIFAGKQL+DGRTLSDYNI
Sbjct: 193 QRLIFAGKQLEDGRTLSDYNI 213


>AF487535-1|AAL93296.1|  494|Anopheles gambiae cytochrome P450
           CYP6Z1 protein.
          Length = 494

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 2   HEAPVSADVLSLPANNSKTVALFLTTT 82
           H  P+SA++ +LP    K +   LT T
Sbjct: 106 HSDPMSANLFALPGQRWKNLRAKLTPT 132


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,656
Number of Sequences: 2352
Number of extensions: 792
Number of successful extensions: 4
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 9
effective length of database: 542,811
effective search space used:  9770598
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)