Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P05
(407 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces... 35 0.006
SPBC146.09c |lsd1|swm1, saf110|histone demethylase SWIRM1|Schizo... 27 0.85
SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces p... 27 1.1
SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin Nup132|Schizosa... 27 1.5
SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|... 26 2.0
SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|ch... 26 2.6
SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr ... 25 3.4
SPAC2E1P3.05c |||fungal cellulose binding domain protein|Schizos... 25 3.4
SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease |Schizosacc... 25 3.4
SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase Rdp1|Schizosa... 25 3.4
SPAC11D3.18c |||nicotinic acid plasma membrane transporter |Schi... 25 3.4
SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog |Schizosacchar... 25 3.4
SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyc... 25 4.5
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 25 6.0
SPCC1827.04 |||ankyrin repeat protein, unknown biological role|S... 25 6.0
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 25 6.0
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 24 7.9
SPAC824.08 |gda1|gdp1|guanosine-diphosphatase Gda1|Schizosacchar... 24 7.9
SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2 |Schiz... 24 7.9
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 24 7.9
>SPBC16C6.02c |vps1302|vps13b|chorein homolog|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 3131
Score = 34.7 bits (76), Expect = 0.006
Identities = 24/85 (28%), Positives = 39/85 (45%)
Frame = +2
Query: 8 GIRHEGAADLSEEVTKRRAARYLPAESGVRPYSRLHAEGYKMLSELEKGKYVSTDTYEAH 187
GIR+ + E+ K R RY+ + P+ + G MLS L+ GKY + D Y H
Sbjct: 2856 GIRNSTDVRTNPEIDKVRVPRYVEFGGLIVPFKPYESLGKYMLSCLDDGKY-AFDEYLYH 2914
Query: 188 VWVIQGKEVVMCTDKRLLYLEKNNV 262
IQ +++ + K + N +
Sbjct: 2915 A-EIQNVDILYISTKHFIITGSNYI 2938
>SPBC146.09c |lsd1|swm1, saf110|histone demethylase
SWIRM1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1000
Score = 27.5 bits (58), Expect = 0.85
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -1
Query: 152 PFQVRTTFCSLQRVASSTVSHQTRRASNAQPYASSPLQINL 30
P V+++ ++ RV + +++ ASN P A SPL+ +
Sbjct: 134 PISVKSSIPAIPRVTFERLCYESAIASNLPPNALSPLEAEM 174
>SPBC29A10.05 |exo1|mut2|exonuclease I Exo1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 571
Score = 27.1 bits (57), Expect = 1.1
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 29 ADLSEEVTKRRAARYLPAESGVRPYSRLHAEGYKMLSE 142
+D+S TK +LP +GV Y +L K + E
Sbjct: 431 SDISNSATKNENVPFLPPRTGVSKYFKLQKNTEKEIDE 468
>SPAC1805.04 |nup132|Nup133b, Nup133b|nucleoporin
Nup132|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1162
Score = 26.6 bits (56), Expect = 1.5
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 296 WSELPEVPSSVAKGVYIPTAKKKVLGMFS 382
W E+ + ++V+ G+++ T K VLG +S
Sbjct: 397 WEEVIRMNTNVSGGIFMSTCYKYVLGKYS 425
>SPAC13G6.10c |||O-glucosyl hydrolase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 530
Score = 26.2 bits (55), Expect = 2.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -3
Query: 228 SVHMTTSLPCMTHTCASYVSVLTYLPFSSSDNIL*P 121
SV +TTS P + + SY + P + DN+ P
Sbjct: 89 SVVVTTSAPAASSSATSYPATFVSTPLYTMDNVTAP 124
>SPCC320.05 |||sulphate transporter |Schizosaccharomyces pombe|chr
3|||Manual
Length = 667
Score = 25.8 bits (54), Expect = 2.6
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPP 21
A+ST+SH+T +S A A L + +P P
Sbjct: 521 AASTLSHRTNPSSTAVESAPRILVVRIPEP 550
>SPAC6F6.01 |||VIC sodium channel |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1854
Score = 25.4 bits (53), Expect = 3.4
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = -3
Query: 144 SSDNIL*PSACSLEYGLTPDS 82
+ DN+L S C LEY TP++
Sbjct: 1108 NDDNVLSASQCVLEYASTPNN 1128
>SPAC2E1P3.05c |||fungal cellulose binding domain
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 197
Score = 25.4 bits (53), Expect = 3.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = -3
Query: 228 SVHMTTSLPCMTHTCASYVSVLTYLPFSSS 139
+V TTS+P ++ T +S VS ++ SSS
Sbjct: 143 AVSSTTSIPSISSTISSSVSTSSFTSLSSS 172
>SPAC24C9.14 |otu1|mug141|ubiquitin-specific protease
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 25.4 bits (53), Expect = 3.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = -1
Query: 98 VSHQTRRASNAQPYASSPL 42
VSHQ++ S PY S+P+
Sbjct: 114 VSHQSKNTSQDPPYVSTPI 132
>SPAC6F12.09 |rdp1|rdr1|RNA-directed RNA polymerase
Rdp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1215
Score = 25.4 bits (53), Expect = 3.4
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -2
Query: 400 FPGSRTREHSEYFLFSCRYVNTLGDRRWHFGEFT 299
F S+ REH YF S +N R W G+F+
Sbjct: 538 FGNSQLREHGAYFFASGSDLNAKQIREW-MGDFS 570
>SPAC11D3.18c |||nicotinic acid plasma membrane transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 498
Score = 25.4 bits (53), Expect = 3.4
Identities = 12/21 (57%), Positives = 12/21 (57%)
Frame = -2
Query: 358 FSCRYVNTLGDRRWHFGEFTP 296
FS RYVN D R GEF P
Sbjct: 464 FSLRYVNKKRDERCARGEFDP 484
>SPCC11E10.09c ||SPCC188.01c|alpha-amylase homolog
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 478
Score = 25.4 bits (53), Expect = 3.4
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -2
Query: 277 LPAAENI-ILFQIQETFVSAHDHLLALYDPHVRFIR 173
LP+ N + FQ++ETF+ + + YD V +R
Sbjct: 256 LPSTLNFPLFFQLRETFLDPKHSMFSFYDKAVLDVR 291
>SPAC4G9.19 |||DNAJ domain protein DNAJB family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.0 bits (52), Expect = 4.5
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 243 IWKRIMFSAAGRSYGRIYGVNSPKCHRLSPRVFTYRQLKRKYSECSRVRDPGK 401
+W+R +A+ SY + + + L PR T +KRKY E + P K
Sbjct: 15 LWRR---AASFTSYSELKSLTPYEILEL-PRTCTANDIKRKYIELVKKHHPDK 63
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 24.6 bits (51), Expect = 6.0
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = -1
Query: 155 CPFQVRTTFCSLQRVASSTVSHQTRRASNAQPYASSPLQINLPPP 21
C F+V + L S HQ ++N+Q + Q + PPP
Sbjct: 263 CHFEVHDSDALLSNQLLSADKHQLAASNNSQDFEDGK-QYDQPPP 306
>SPCC1827.04 |||ankyrin repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 600
Score = 24.6 bits (51), Expect = 6.0
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 41 EEVTKRRAARYLPAESGVRPYSRLHAEGYKM 133
+E +R+ A E R Y +LH EG+ +
Sbjct: 532 QEELRRKEAMQKIEEQSKRDYDKLHGEGHSL 562
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 24.6 bits (51), Expect = 6.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -3
Query: 339 TPLA-TDDGTSGSSLHKYDHTICQPPKTLFFSRYRRRLSVHMTTSLPCMT 193
TP++ T TS S + TI P T+ S + S +TTS P ++
Sbjct: 277 TPVSLTSSSTSSSGSSQDSTTIDSTPSTIATSTLQPTTSSPITTSAPSLS 326
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 24.2 bits (50), Expect = 7.9
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
Frame = -3
Query: 219 MTTSLPCMTHTCASYVSVLTYLPFSS---SDNIL*PSAC---SLEYGLTPDSAGK*RAAL 58
+T ++ T+ ++++ +T P +S ++N PS+ S+ Y +TP SA ++
Sbjct: 421 LTETILTTTYDSHTFLTTITPSPSNSISYTNNTFIPSSSIKSSIVYSVTPTSAENYTSSE 480
Query: 57 RFVTSSDKSAAP 22
F TSS P
Sbjct: 481 AFSTSSSLVVIP 492
>SPAC824.08 |gda1|gdp1|guanosine-diphosphatase
Gda1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 556
Score = 24.2 bits (50), Expect = 7.9
Identities = 11/25 (44%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 333 LATDDGTSGSSLHKYDHTICQP-PK 262
L D G++GS +H Y C P PK
Sbjct: 136 LMIDAGSTGSRVHVYQFNNCNPSPK 160
>SPAC12B10.14c |ppk2||serine/threonine protein kinase Ppk2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 665
Score = 24.2 bits (50), Expect = 7.9
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 152 GKYVSTDTYEAHVWVIQGKEVVMCTDKRLLYLEKNNVFG 268
G YV+ T + V VI+ ++ T +RLL E + G
Sbjct: 401 GTYVARQTLDKEVVVIKRFDISAVTHRRLLLEELQRLSG 439
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 24.2 bits (50), Expect = 7.9
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = +3
Query: 111 YTLKATKCCPNLKRAN 158
+ + T CCPNLK N
Sbjct: 494 HAIHITDCCPNLKYVN 509
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,849,638
Number of Sequences: 5004
Number of extensions: 38101
Number of successful extensions: 116
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 140222766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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