Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P05
(407 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069387-1|AAH69387.1| 449|Homo sapiens VPS13C protein protein. 46 5e-05
AK000143-1|BAA90972.1| 442|Homo sapiens protein ( Homo sapiens ... 46 5e-05
AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein. 46 5e-05
AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein. 46 5e-05
AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein. 32 0.85
AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein. 32 0.85
AY898804-1|AAX51890.1| 388|Homo sapiens XL protein. 29 6.0
AL132655-7|CAM28315.1| 720|Homo sapiens GNAS complex locus prot... 29 6.0
AL132655-6|CAI43073.2| 1037|Homo sapiens GNAS complex locus prot... 29 6.0
AL132655-5|CAI43074.2| 1023|Homo sapiens GNAS complex locus prot... 29 6.0
AL121917-8|CAI42566.2| 1037|Homo sapiens GNAS complex locus prot... 29 6.0
AL121917-7|CAI42567.2| 1023|Homo sapiens GNAS complex locus prot... 29 6.0
AL109840-9|CAI42932.2| 1037|Homo sapiens GNAS complex locus prot... 29 6.0
AL109840-8|CAI42933.2| 1023|Homo sapiens GNAS complex locus prot... 29 6.0
AJ251760-2|CAB83215.1| 388|Homo sapiens XLalphas protein protein. 29 6.0
AJ224868-1|CAA12165.1| 441|Homo sapiens GNAS1 protein. 29 6.0
AF187072-1|AAF08273.1| 515|Homo sapiens N-acetylglucosamine-1-p... 29 8.0
>BC069387-1|AAH69387.1| 449|Homo sapiens VPS13C protein protein.
Length = 449
Score = 46.0 bits (104), Expect = 5e-05
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 26 AADLSEEVTKRRAARYLPAESGVRPYSRLHAEGYKMLSELEKGKYVSTDTYEAHVWVIQG 205
AA+ +EEV+ R R + + +RPY R +EG +L K + +TY H +
Sbjct: 280 AAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGSDLLE--NHIKKLEGETYRYHCAIPGS 337
Query: 206 KE-VVMCTDKRLLYLEKNNVFGGWQIVWSYLWSELPEVPSSVAKGVYIPTAKKKVLGMFS 382
K+ ++M T++R+L +++ + G + W + + P SV++ V + K++ G+F
Sbjct: 338 KKTILMVTNRRVLCIKEVEILGLMCVDWQCPFEDF-VFPPSVSENVLKISVKEQ--GLFH 394
Query: 383 SSGS 394
S
Sbjct: 395 KKDS 398
>AK000143-1|BAA90972.1| 442|Homo sapiens protein ( Homo sapiens
cDNA FLJ20136 fis, clone COL07068. ).
Length = 442
Score = 46.0 bits (104), Expect = 5e-05
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 26 AADLSEEVTKRRAARYLPAESGVRPYSRLHAEGYKMLSELEKGKYVSTDTYEAHVWVIQG 205
AA+ +EEV+ R R + + +RPY R +EG +L K + +TY H +
Sbjct: 273 AAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGSDLLE--NHIKKLEGETYRYHCAIPGS 330
Query: 206 KE-VVMCTDKRLLYLEKNNVFGGWQIVWSYLWSELPEVPSSVAKGVYIPTAKKKVLGMFS 382
K+ ++M T++R+L +++ + G + W + + P SV++ V + K++ G+F
Sbjct: 331 KKTILMVTNRRVLCIKEVEILGLMCVDWQCPFEDF-VFPPSVSENVLKISVKEQ--GLFH 387
Query: 383 SSGS 394
S
Sbjct: 388 KKDS 391
>AJ608771-1|CAE75583.1| 3753|Homo sapiens VPS13C-2A protein protein.
Length = 3753
Score = 46.0 bits (104), Expect = 5e-05
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 26 AADLSEEVTKRRAARYLPAESGVRPYSRLHAEGYKMLSELEKGKYVSTDTYEAHVWVIQG 205
AA+ +EEV+ R R + + +RPY R +EG +L K + +TY H +
Sbjct: 3584 AAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGSDLLE--NHIKKLEGETYRYHCAIPGS 3641
Query: 206 KE-VVMCTDKRLLYLEKNNVFGGWQIVWSYLWSELPEVPSSVAKGVYIPTAKKKVLGMFS 382
K+ ++M T++R+L +++ + G + W + + P SV++ V + K++ G+F
Sbjct: 3642 KKTILMVTNRRVLCIKEVEILGLMCVDWQCPFEDF-VFPPSVSENVLKISVKEQ--GLFH 3698
Query: 383 SSGS 394
S
Sbjct: 3699 KKDS 3702
>AJ608770-1|CAE75582.1| 3710|Homo sapiens VPS13C-1A protein protein.
Length = 3710
Score = 46.0 bits (104), Expect = 5e-05
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 1/124 (0%)
Frame = +2
Query: 26 AADLSEEVTKRRAARYLPAESGVRPYSRLHAEGYKMLSELEKGKYVSTDTYEAHVWVIQG 205
AA+ +EEV+ R R + + +RPY R +EG +L K + +TY H +
Sbjct: 3541 AAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGSDLLE--NHIKKLEGETYRYHCAIPGS 3598
Query: 206 KE-VVMCTDKRLLYLEKNNVFGGWQIVWSYLWSELPEVPSSVAKGVYIPTAKKKVLGMFS 382
K+ ++M T++R+L +++ + G + W + + P SV++ V + K++ G+F
Sbjct: 3599 KKTILMVTNRRVLCIKEVEILGLMCVDWQCPFEDF-VFPPSVSENVLKISVKEQ--GLFH 3655
Query: 383 SSGS 394
S
Sbjct: 3656 KKDS 3659
>AJ626861-1|CAF25188.1| 3628|Homo sapiens VPS13C-2B protein protein.
Length = 3628
Score = 31.9 bits (69), Expect = 0.85
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 26 AADLSEEVTKRRAARYLPAESGVRPYSRLHAEGYKML-SELE 148
AA+ +EEV+ R R + + +RPY R +EG +L ELE
Sbjct: 3584 AAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGSDLLEQELE 3625
>AJ626860-1|CAF25187.1| 3585|Homo sapiens VPS13C-1B protein protein.
Length = 3585
Score = 31.9 bits (69), Expect = 0.85
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +2
Query: 26 AADLSEEVTKRRAARYLPAESGVRPYSRLHAEGYKML-SELE 148
AA+ +EEV+ R R + + +RPY R +EG +L ELE
Sbjct: 3541 AAESTEEVSSLRPPRLIHEDGIIRPYDRQESEGSDLLEQELE 3582
>AY898804-1|AAX51890.1| 388|Homo sapiens XL protein.
Length = 388
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 201 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 233
>AL132655-7|CAM28315.1| 720|Homo sapiens GNAS complex locus
protein.
Length = 720
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 502 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 534
>AL132655-6|CAI43073.2| 1037|Homo sapiens GNAS complex locus
protein.
Length = 1037
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 502 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 534
>AL132655-5|CAI43074.2| 1023|Homo sapiens GNAS complex locus
protein.
Length = 1023
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 502 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 534
>AL121917-8|CAI42566.2| 1037|Homo sapiens GNAS complex locus
protein.
Length = 1037
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 502 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 534
>AL121917-7|CAI42567.2| 1023|Homo sapiens GNAS complex locus
protein.
Length = 1023
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 502 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 534
>AL109840-9|CAI42932.2| 1037|Homo sapiens GNAS complex locus
protein.
Length = 1037
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 502 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 534
>AL109840-8|CAI42933.2| 1023|Homo sapiens GNAS complex locus
protein.
Length = 1023
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 502 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 534
>AJ251760-2|CAB83215.1| 388|Homo sapiens XLalphas protein protein.
Length = 388
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 201 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 233
>AJ224868-1|CAA12165.1| 441|Homo sapiens GNAS1 protein.
Length = 441
Score = 29.1 bits (62), Expect = 6.0
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = -1
Query: 110 ASSTVSHQTRRASNAQPYASSPLQINLPPPRAE 12
AS+T + Q RRA++A P + + +I+L PP E
Sbjct: 201 ASATRAAQVRRAASAAPASGARRKIHLRPPSPE 233
>AF187072-1|AAF08273.1| 515|Homo sapiens
N-acetylglucosamine-1-phosphodiester
alpha-N-acetylglucosaminidase protein.
Length = 515
Score = 28.7 bits (61), Expect = 8.0
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -1
Query: 173 CQCSHICPFQVRTTFCSLQRV 111
C+C H CP +T CS+ RV
Sbjct: 406 CKCEHHCPCDPKTGNCSVSRV 426
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,106,368
Number of Sequences: 237096
Number of extensions: 1434109
Number of successful extensions: 4016
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4016
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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