Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_P03
         (432 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                27   0.12 
EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle pr...    24   0.84 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   1.5  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    23   1.9  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    22   3.4  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   7.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   7.8  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   7.8  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   7.8  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 26.6 bits (56), Expect = 0.12
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = -2

Query: 200 AGQLSPGFYISQQHPVQPT*RRRVKPHH 117
           AG L P ++  Q HP Q    R   PHH
Sbjct: 309 AGFLPPSYHPHQHHPSQYHPHRGSSPHH 336


>EF531707-1|ABP57431.1|  138|Apis mellifera structural cuticle
           protein protein.
          Length = 138

 Score = 23.8 bits (49), Expect = 0.84
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = -3

Query: 232 LVTSSRTELNVQGSYPQGFTFLSNILCSQHSG 137
           ++TS + E+N  G+Y   F   SN +  Q SG
Sbjct: 28  VITSQQLEVNFDGNYINNFE-TSNGISHQESG 58


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.0 bits (47), Expect = 1.5
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = -1

Query: 126 ASSRSAFTFMPPVTRAIVSRPDRSVTCTNV 37
           A  R  FT+   + ++I+  PD+ +T   +
Sbjct: 501 ADVRPPFTYASLIRQSIIESPDKQLTLNEI 530


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 73  FSTGQIGNVHECVI 32
           F TG +GNV  CV+
Sbjct: 64  FVTGLVGNVSTCVV 77


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.4
 Identities = 13/55 (23%), Positives = 20/55 (36%)
 Frame = -3

Query: 337 GVRRHRGHIFNAANLHAGTSESTESRLGTRSRSLCLVTSSRTELNVQGSYPQGFT 173
           G      H+F  A+      +  E  L T   + CL     T +N Q +    F+
Sbjct: 265 GTNTDARHLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIPSTRINKQHTRGNNFS 319


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 382 KKLQPASSSSTLPACGVR 329
           KKLQP  S S L   GV+
Sbjct: 435 KKLQPQYSQSELQMPGVK 452


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 382 KKLQPASSSSTLPACGVR 329
           KKLQP  S S L   GV+
Sbjct: 435 KKLQPQYSQSELQMPGVK 452


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
          protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = -3

Query: 73 FSTGQIGNVHECVI 32
          F TG +GN+  C++
Sbjct: 44 FVTGFVGNIITCIV 57


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.6 bits (41), Expect = 7.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 235 CLVTSSRTELNVQGSYP 185
           C+V +    LN++ SYP
Sbjct: 605 CIVPTGDLPLNIRWSYP 621


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,436
Number of Sequences: 438
Number of extensions: 2105
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11244597
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)