Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_P02
(483 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68270-13|CAD21675.1| 225|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z68270-12|CAA92573.1| 205|Caenorhabditis elegans Hypothetical p... 42 3e-04
Z68213-7|CAD21589.1| 225|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z68213-6|CAA92442.1| 205|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF202932-1|AAK69382.1| 225|Caenorhabditis elegans ICln2 protein. 42 3e-04
AF202931-1|AAK69381.1| 205|Caenorhabditis elegans ICln1 protein. 42 3e-04
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 29 2.3
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 29 2.3
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 29 2.3
AF067950-3|AAG24158.2| 371|Caenorhabditis elegans Serpentine re... 28 4.1
AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical... 27 7.1
Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z68270-13|CAD21675.1| 225|Caenorhabditis elegans Hypothetical
protein C01F6.8b protein.
Length = 225
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 171 EGVLLQTPSTKLLVNDQELGTGILYITETNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 350
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 351 RE 356
+
Sbjct: 67 TD 68
>Z68270-12|CAA92573.1| 205|Caenorhabditis elegans Hypothetical
protein C01F6.8a protein.
Length = 205
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 171 EGVLLQTPSTKLLVNDQELGTGILYITETNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 350
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 351 RE 356
+
Sbjct: 67 TD 68
>Z68213-7|CAD21589.1| 225|Caenorhabditis elegans Hypothetical
protein C01F6.8b protein.
Length = 225
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 171 EGVLLQTPSTKLLVNDQELGTGILYITETNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 350
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 351 RE 356
+
Sbjct: 67 TD 68
>Z68213-6|CAA92442.1| 205|Caenorhabditis elegans Hypothetical
protein C01F6.8a protein.
Length = 205
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 171 EGVLLQTPSTKLLVNDQELGTGILYITETNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 350
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 351 RE 356
+
Sbjct: 67 TD 68
>AF202932-1|AAK69382.1| 225|Caenorhabditis elegans ICln2 protein.
Length = 225
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 171 EGVLLQTPSTKLLVNDQELGTGILYITETNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 350
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 351 RE 356
+
Sbjct: 67 TD 68
>AF202931-1|AAK69381.1| 205|Caenorhabditis elegans ICln1 protein.
Length = 205
Score = 41.5 bits (93), Expect = 3e-04
Identities = 22/62 (35%), Positives = 31/62 (50%)
Frame = +3
Query: 171 EGVLLQTPSTKLLVNDQELGTGILYITETNVIWGGGVRPSGGSAPTISILYPTISIHAIQ 350
EG+ L T + + LG G LYIT++ VIW + G S+ YP I +HAI
Sbjct: 11 EGIKLATTNVQAFFKIDSLGNGTLYITDSAVIWISSAAGTKG----FSVAYPAIVLHAIS 66
Query: 351 RE 356
+
Sbjct: 67 TD 68
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 307 VGAEPPDGLTPPPHMTLVSVIYKIPVPNS 221
+G PP PPPH+ L + Y +P P S
Sbjct: 97 IGMPPPPLGMPPPHIGLGAAPYAVPPPMS 125
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 307 VGAEPPDGLTPPPHMTLVSVIYKIPVPNS 221
+G PP PPPH+ L + Y +P P S
Sbjct: 120 IGMPPPPLGMPPPHIGLGAAPYAVPPPMS 148
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 307 VGAEPPDGLTPPPHMTLVSVIYKIPVPNS 221
+G PP PPPH+ L + Y +P P S
Sbjct: 370 IGMPPPPLGMPPPHIGLGAAPYAVPPPMS 398
>AF067950-3|AAG24158.2| 371|Caenorhabditis elegans Serpentine
receptor, class w protein137 protein.
Length = 371
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/42 (26%), Positives = 26/42 (61%)
Frame = -1
Query: 126 QKNIKQYYYCYKNVNYMFELLDSCTTNTLRQ*YERKHKSFLC 1
++ ++ YY C+++ Y F +++ T+ + Q Y R+ ++LC
Sbjct: 92 ERFLRDYYDCFQSETYTFVIIE--TSFQVLQDYSRRCSTWLC 131
>AL031627-13|CAA20964.1| 304|Caenorhabditis elegans Hypothetical
protein Y102A5C.23 protein.
Length = 304
Score = 27.1 bits (57), Expect = 7.1
Identities = 28/114 (24%), Positives = 53/114 (46%)
Frame = +1
Query: 19 FSFILLSKSISCTRIQ*LKHIIYVLIAVIILFYIFLLAQWWLFRQLSRCRWKACFFRLLQ 198
F F L S+ C Q + H++ ++AV F F+ + LF+ SRC+ K +F ++
Sbjct: 87 FCFYSLFSSL-CIITQ-VFHVLLFVLAVERFFIYFIPSSGKLFK-FSRCKIKPLYFLIIT 143
Query: 199 QNY*LMIKNWAQEFYISLKLMSYGVEVSDHQVAQLLLSPSFIPLSQSTQYRGNL 360
+ ++ +A Y ++ Y + S + L + +IP+ S + NL
Sbjct: 144 KEVSCLL--YASWDYEPVQ-FQYWITCSINDALVFLSAILYIPIVISIRKYANL 194
>Z83241-2|CAB05816.2| 435|Caenorhabditis elegans Hypothetical
protein T25C8.1 protein.
Length = 435
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -1
Query: 153 LTKQP-PLCQQKNIKQYYYCYKNVNYMFELLD 61
LT+ P PL N + YC +N + E+LD
Sbjct: 171 LTQNPDPLISHHNAHSWGYCTENATWQSEILD 202
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,670,941
Number of Sequences: 27780
Number of extensions: 251021
Number of successful extensions: 704
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 668
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 698
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 892829112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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