Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_O24
(570 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical pr... 31 0.58
Z75713-5|CAB00054.1| 598|Caenorhabditis elegans Hypothetical pr... 29 1.8
U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily ass... 29 1.8
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 29 2.4
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 29 2.4
AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical ... 29 2.4
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 3.1
U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical pr... 29 3.1
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 3.1
AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacti... 29 3.1
U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine re... 28 4.1
Z81474-5|CAB03906.1| 361|Caenorhabditis elegans Hypothetical pr... 28 5.4
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical pr... 27 7.2
U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid precur... 27 7.2
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 27 7.2
U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid pr... 27 7.2
AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative treh... 27 7.2
Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical pr... 27 9.5
AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans trehalose-6-p... 27 9.5
AF036694-8|AAB88346.2| 607|Caenorhabditis elegans Hypothetical ... 27 9.5
>U97196-1|AAK68667.2| 3279|Caenorhabditis elegans Hypothetical protein
B0207.5 protein.
Length = 3279
Score = 31.1 bits (67), Expect = 0.58
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Frame = +1
Query: 4 RGAIAPPEDENNKWVRAF-RKKTQIEIKPNSTSVDEKIESNSQLLTSEPEM-VIDSD 168
+G+ P EDEN + V+ RK+ QIE KP S +E + +LLT + +M VI +D
Sbjct: 2869 KGSEIPDEDENGESVKVMKRKEYQIE-KPQSMP-EESEDEEFKLLTKKKKMGVIAND 2923
>Z75713-5|CAB00054.1| 598|Caenorhabditis elegans Hypothetical
protein T01G9.4 protein.
Length = 598
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +1
Query: 280 LPAPSLEKIADYVFFTKNTDDAFVKNFVKHSLPIILMKDY-KRFYLDLIKLIM 435
L PSL + Y F K V + V+H +P+I+M D ++Y DL ++
Sbjct: 480 LSLPSLTFLYSYQRFVKMMHCGDVLDCVQHLIPLIMMPDVPTQYYYDLFDYLI 532
>U39996-7|AAA81093.1| 1667|Caenorhabditis elegans Temporarily
assigned gene nameprotein 177 protein.
Length = 1667
Score = 29.5 bits (63), Expect = 1.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 430 IMNKYSDIFTDLLEVIVKNENVSTNILCDLTTNINGGEKEVFSEH 564
+++K DIF L E I K + ST LC + + +E F++H
Sbjct: 737 LLHKSDDIFNVLCEHITKPGSRSTPALCGILAALTRDLREKFNKH 781
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical
protein F15A2.6b protein.
Length = 835
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 236 SFCRNSMSKSDPVPNDSKNCS*LSESITISGSLVNN 129
S C+N S + VP+ S +SES+ +S S +N+
Sbjct: 531 SSCKNDASSTSSVPHKYSPPSVMSESVVVSSSTMNS 566
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 236 SFCRNSMSKSDPVPNDSKNCS*LSESITISGSLVNN 129
S C+N S + VP+ S +SES+ +S S +N+
Sbjct: 531 SSCKNDASSTSSVPHKYSPPSVMSESVVVSSSTMNS 566
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -2
Query: 236 SFCRNSMSKSDPVPNDSKNCS*LSESITISGSLVNN 129
S C+N S + VP+ S +SES+ +S S +N+
Sbjct: 531 SSCKNDASSTSSVPHKYSPPSVMSESVVVSSSTMNS 566
>AF000198-2|AAB53055.2| 748|Caenorhabditis elegans Hypothetical
protein T28F2.4a protein.
Length = 748
Score = 29.1 bits (62), Expect = 2.4
Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 103 DEKIESNSQLLTSEPEMVIDSDNYEQF--FESLGTGSDLDIEFLQKE 237
DE++E + E EM+ID + E++ FES+ D++ E ++ E
Sbjct: 176 DEELEDEDETDIDEDEMMIDPKDIERYINFESVEDEEDMEDEEIEDE 222
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 37 NKWVRAFRKKTQIEIKPNS-TSVDE 108
N+WV+ RK TQ+E P+S TS+ E
Sbjct: 246 NRWVKEIRKVTQLERDPSSGTSLQE 270
>U13875-6|AAK67213.1| 390|Caenorhabditis elegans Hypothetical
protein C26E6.12 protein.
Length = 390
Score = 28.7 bits (61), Expect = 3.1
Identities = 16/32 (50%), Positives = 19/32 (59%)
Frame = +1
Query: 262 TLIAHRLPAPSLEKIADYVFFTKNTDDAFVKN 357
TL+ +P S+ KIADY F T N AF KN
Sbjct: 176 TLLKALVPEKSV-KIADYAFTTVNPQVAFFKN 206
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Frame = +1
Query: 37 NKWVRAFRKKTQIEIKPNS-TSVDE 108
N+WV+ RK TQ+E P+S TS+ E
Sbjct: 246 NRWVKEIRKVTQLERDPSSGTSLQE 270
>AF016672-8|AAB66117.4| 998|Caenorhabditis elegans Jnk interacting
protein (scaffoldprotein) protein 1 protein.
Length = 998
Score = 28.7 bits (61), Expect = 3.1
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +1
Query: 238 CREHPKLLTLIAHRLPAPSLEKIADYVFFTKNTDDAFVK 354
C HPK L P L + A +VF +KNT V+
Sbjct: 934 CGAHPKQLKYFGFITKHPLLPRFACHVFMSKNTTQPIVE 972
>U28929-5|AAA68348.2| 438|Caenorhabditis elegans Gaba/glycine
receptor family (seegbr) protein 3 protein.
Length = 438
Score = 28.3 bits (60), Expect = 4.1
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +2
Query: 146 LKWLSIQIITNNSLNHWERDQIWTSNFCRKNVANTR 253
L++ +I TN SL+ + +++WT N C N +T+
Sbjct: 94 LEYRNISCKTNLSLDSYVSERLWTPNVCFVNSKSTQ 129
>Z81474-5|CAB03906.1| 361|Caenorhabditis elegans Hypothetical
protein C18D4.9 protein.
Length = 361
Score = 27.9 bits (59), Expect = 5.4
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = -2
Query: 389 IKIIGKECLTKFLTKASSVFLVKKT-----*SAIFSRDGAGRRCAIKVSNFGCSRHSFCR 225
IKI K CL F K + ++++ T S I DG I++S C+RH +
Sbjct: 271 IKIRPKLCLVTFCFKIALPYIIRNTKIQHIISGISINDGFTTPLIIQLSYLWCNRHILFK 330
Query: 224 NSMSKS 207
N K+
Sbjct: 331 NFKLKT 336
>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical protein
C27A2.1 protein.
Length = 1076
Score = 27.9 bits (59), Expect = 5.4
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 61 KKTQIEIKPNSTSVDEKIESNSQLLTSEPEMVID--SDNYEQFFESLGTGSDLDIE 222
K Q ++ N + +K+ E E +I+ + NY QFF+SLG ++ +E
Sbjct: 875 KTRQEKLIENRARIHDKLGDEINNWRKEVETMIEQINVNYVQFFDSLGCRGEVSLE 930
>Z93378-5|CAB07584.3| 1229|Caenorhabditis elegans Hypothetical protein
F19H8.1 protein.
Length = 1229
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 160 DSDNYEQFFESLGTGSDLDIEFLQKECREHPKLLTLIAH 276
D+DN EQF ++L + + +E +KE +LL H
Sbjct: 893 DADNVEQFVDTLISSHPISVETYKKEVENAVELLYSADH 931
>U56966-10|AAA98722.1| 686|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform a protein.
Length = 686
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 25 EDENNKWVRAFRKKTQI-EIKPNSTSVDEKIESNSQLLTSEPEMVIDSDNYEQFFESLGT 201
+DE K +KK ++ +IKP V + E + L D D+ E S +
Sbjct: 514 DDEQVKKTPDMKKKVKVVDIKPKEIKVTIEEEKKAPKLVETSVQTDDEDDDEDSSSSTSS 573
Query: 202 GSDLDIEFLQKECR 243
SD D + KE R
Sbjct: 574 ESDEDEDKNIKELR 587
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 219 RISAERMSRTPEVANFDSASSTSAISG 299
RI AER RTP+ A + +TSA+ G
Sbjct: 21 RIRAERNQRTPKCARCRNHGTTSALKG 47
>U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid
protein precursor protein.
Length = 680
Score = 27.5 bits (58), Expect = 7.2
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 25 EDENNKWVRAFRKKTQI-EIKPNSTSVDEKIESNSQLLTSEPEMVIDSDNYEQFFESLGT 201
+DE K +KK ++ +IKP V + E + L D D+ E S +
Sbjct: 508 DDEQVKKTPDMKKKVKVVDIKPKEIKVTIEEEKKAPKLVETSVQTDDEDDDEDSSSSTSS 567
Query: 202 GSDLDIEFLQKECR 243
SD D + KE R
Sbjct: 568 ESDEDEDKNIKELR 581
>AJ811574-1|CAH18872.1| 1229|Caenorhabditis elegans putative trehalose
6-phosphatesynthase protein.
Length = 1229
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +1
Query: 160 DSDNYEQFFESLGTGSDLDIEFLQKECREHPKLLTLIAH 276
D+DN EQF ++L + + +E +KE +LL H
Sbjct: 893 DADNVEQFVDTLISSHPISVETYKKEVENAVELLYSADH 931
>Z81064-2|CAB02963.1| 259|Caenorhabditis elegans Hypothetical
protein F16B12.2 protein.
Length = 259
Score = 27.1 bits (57), Expect = 9.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = -2
Query: 284 GRRCAIKVSNFGCSRHSFCRN 222
GRRC +++ + CS +C+N
Sbjct: 163 GRRCEKRIARWDCSDEGYCQN 183
>AJ512333-1|CAD54507.2| 1230|Caenorhabditis elegans
trehalose-6-phosphate synthase protein.
Length = 1230
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 160 DSDNYEQFFESLGTGSDLDIEFLQKECREHPKLL 261
D+DN EQF ++L + + +E +KE +LL
Sbjct: 893 DADNVEQFVDTLISSHPISVETYKKEVENAVELL 926
>AF036694-8|AAB88346.2| 607|Caenorhabditis elegans Hypothetical
protein CD4.8 protein.
Length = 607
Score = 27.1 bits (57), Expect = 9.5
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +1
Query: 298 EKIADYVFFTKNTDDAFVKNFVKHSLPIILMKDYKRFYLDLIKLIMN 438
EKI K ++ KN +KH L ++L D + L+ I+N
Sbjct: 561 EKIDQPGLAEKVFENRVKKNLIKHFLQVLLFSDVREILQGLLFFILN 607
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,534,865
Number of Sequences: 27780
Number of extensions: 253888
Number of successful extensions: 878
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 877
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1187327456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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