Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_O22
(488 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical pr... 35 0.028
L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical pr... 35 0.028
AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical ... 35 0.028
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ... 34 0.064
AL034392-4|CAA22307.2| 203|Caenorhabditis elegans Hypothetical ... 33 0.11
AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical ... 33 0.15
AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical ... 31 0.34
Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical pr... 31 0.45
AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical ... 28 0.59
U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell l... 30 0.78
AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger p... 30 0.78
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 29 1.4
U80837-2|AAB37902.1| 315|Caenorhabditis elegans Hypothetical pr... 29 1.8
U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of p... 29 2.4
U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of p... 29 2.4
U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical pr... 29 2.4
U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical pr... 29 2.4
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 29 2.4
Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical pr... 28 3.2
U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger pro... 28 3.2
U29378-5|AAA68725.2| 355|Caenorhabditis elegans Hypothetical pr... 28 3.2
AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical ... 28 3.2
AL021447-3|CAA16274.1| 459|Caenorhabditis elegans Hypothetical ... 28 4.2
AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical ... 28 4.2
Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical p... 27 5.5
Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical p... 27 5.5
Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical p... 27 5.5
Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical p... 27 5.5
Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical p... 27 5.5
Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical pr... 27 5.5
Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical pr... 27 5.5
U23526-2|AAK95867.1| 281|Caenorhabditis elegans Claudin-like in... 27 5.5
L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical pr... 27 5.5
AY390552-1|AAQ94964.1| 557|Caenorhabditis elegans SMA-9 class I... 27 5.5
AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class I... 27 5.5
AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class I... 27 5.5
AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class I... 27 5.5
AF252605-1|AAF67351.1| 281|Caenorhabditis elegans Gas3/PMP22-li... 27 5.5
AF101318-8|AAC69343.2| 342|Caenorhabditis elegans Hypothetical ... 27 5.5
Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical pr... 27 7.3
U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical pr... 27 7.3
AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal che... 27 7.3
AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal che... 27 7.3
Z78415-11|CAL36495.1| 435|Caenorhabditis elegans Hypothetical p... 27 9.7
Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical pr... 27 9.7
U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine rece... 27 9.7
U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical pr... 27 9.7
AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical... 27 9.7
AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical... 27 9.7
AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical... 27 9.7
AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical ... 27 9.7
AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical ... 27 9.7
AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical... 27 9.7
>Z78418-2|CAB01695.1| 817|Caenorhabditis elegans Hypothetical
protein F25D7.3 protein.
Length = 817
Score = 35.1 bits (77), Expect = 0.028
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 204 GDVESHCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQDFIYKLNK 359
G+ C +C++ F S S ++ H+R N +K C KF Q +L+K
Sbjct: 560 GERPHRCDICDKRFSSTSNLKTHLRLHNGQKPYTCDVCDAKFTQYVHLRLHK 611
Score = 34.3 bits (75), Expect = 0.048
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 7/80 (8%)
Frame = +3
Query: 204 GDVESHCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKF-------KQDFIYKLNKI 362
G C CN+TF LS ++ H+R + K + C +F K ++ +
Sbjct: 504 GKTRYACKDCNKTFGQLSNLKVHVRTHTGERPFKCEICTKEFTQLAHLQKHHLVHTGERP 563
Query: 363 YYCAICNYCTQDIKSLTNHV 422
+ C IC+ +L H+
Sbjct: 564 HRCDICDKRFSSTSNLKTHL 583
>L16559-6|AAA27931.1| 397|Caenorhabditis elegans Hypothetical
protein C06E1.8 protein.
Length = 397
Score = 35.1 bits (77), Expect = 0.028
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Frame = +3
Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQD-----FIYK---LNKIYYCAI 377
C +C++ F S + +H R + H KS K C ++K ++++Y C
Sbjct: 53 CSICSKVFCHSSSLSRH-RMQAHFKSYKCTVCRKDISSSESLRTHMFKQHHISRMYMCRC 111
Query: 378 CNYCTQDIKSLTNHVNDETHKTNKANPEN 464
CN+ D L H+ T+ + N N
Sbjct: 112 CNWAFPDKSLLHIHLQTATNNNDSNNNNN 140
>AF000194-1|AAK39376.4| 386|Caenorhabditis elegans Hypothetical
protein ZC328.2 protein.
Length = 386
Score = 35.1 bits (77), Expect = 0.028
Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Frame = +3
Query: 219 HCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKF-KQDFI------YKLNKIYYCAI 377
+C +C + F+ + +H R K K + C F + D + + K Y+C +
Sbjct: 248 YCFICEKDFRRPDILSRHTRRHTGEKPFKCEDCGRFFSRSDHLRTHRRTHTDEKPYHCCV 307
Query: 378 CNYCTQDIKSLTNHVN 425
CNY + LT H++
Sbjct: 308 CNYSARRRDVLTRHMS 323
>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
protein ZC123.3 protein.
Length = 1623
Score = 33.9 bits (74), Expect = 0.064
Identities = 20/80 (25%), Positives = 34/80 (42%), Gaps = 3/80 (3%)
Frame = +3
Query: 213 ESHCLLCNETFQSLSQVEKHIRWENHRKSVKIQ---TCVPKFKQDFIYKLNKIYYCAICN 383
+ C +C+ETF + H+ H + K Q + V QD + +IY C +C
Sbjct: 531 KEECEMCSETFATKEAFLSHLNSARHLQQAKKQLENSLVDLNSQD--VEKQRIYVCNVCK 588
Query: 384 YCTQDIKSLTNHVNDETHKT 443
+L H+ TH++
Sbjct: 589 QSYPQAANLDVHMRSMTHQS 608
Score = 32.7 bits (71), Expect = 0.15
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 6/78 (7%)
Frame = +3
Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTCV-----PKFKQDFIYKLN-KIYYCAICN 383
C CN ++ +E H++ +++ VK C PK + Y K Y C +C
Sbjct: 104 CPKCNWHYKYQETLEIHMKEKHNDVDVKCMFCAENRPHPKLARGETYSCGYKPYRCDLCR 163
Query: 384 YCTQDIKSLTNHVNDETH 437
Y T +L+ H+ + H
Sbjct: 164 YSTTTKGNLSIHMQSDKH 181
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +3
Query: 213 ESHCLLCNETFQSLSQVEKHIRWENH 290
E HC +C++TF + ++ H+ E H
Sbjct: 1416 ELHCEICDKTFATRLSLQDHLFAEQH 1441
>AL034392-4|CAA22307.2| 203|Caenorhabditis elegans Hypothetical
protein Y40B1A.4 protein.
Length = 203
Score = 33.1 bits (72), Expect = 0.11
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Frame = +3
Query: 222 CLLCNETFQSLSQVEKHIRWENHRK--SVKIQTCVPKF-KQDFIYKLNKIYYCA---ICN 383
C LCN+T+ S + H+R K + Q C KF + D + + + + CN
Sbjct: 109 CHLCNKTYGKTSHLRAHLRGHAGNKPFACDWQHCNKKFTRSDELQRHRRTHTGEKRFACN 168
Query: 384 YCTQDI---KSLTNHVNDETHKTNKANPENVNKTSI 482
+C + LT H + TH++N+ N N+N+ ++
Sbjct: 169 HCGKKFMRSDHLTKH--ERTHQSNRIN--NINQQTL 200
>AF067940-3|AAC19207.1| 272|Caenorhabditis elegans Hypothetical
protein F36F12.8 protein.
Length = 272
Score = 32.7 bits (71), Expect = 0.15
Identities = 24/89 (26%), Positives = 37/89 (41%), Gaps = 10/89 (11%)
Frame = +3
Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFK-----QDFI---YKLNKIYYCAI 377
CL C + F+ + + +H R H C K +D + + L ++Y C
Sbjct: 42 CLSCGQNFKHGASLNRH-RKLVHSDEYTCMLCARKLYLKETVRDHMRNEHYLGQVYTCGC 100
Query: 378 CNYCTQDIKSLTNHVN--DETHKTNKANP 458
CN+ + K+LT H ET ANP
Sbjct: 101 CNWTFSNKKALTEHAKAIQETGAPGDANP 129
>AF003137-3|AAB93640.1| 625|Caenorhabditis elegans Hypothetical
protein C27A12.2 protein.
Length = 625
Score = 31.5 bits (68), Expect = 0.34
Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 7/94 (7%)
Frame = +3
Query: 219 HCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQDFIYKLN-------KIYYCAI 377
HC+ CN+ + S++ +HIR K C F Q K + K Y C+
Sbjct: 72 HCVQCNKHIKYPSKITEHIRKHTGEKPNVCSICNISFSQAHTLKTHMQQHAHEKPYKCSF 131
Query: 378 CNYCTQDIKSLTNHVNDETHKTNKANPENVNKTS 479
C ++ H H N N +
Sbjct: 132 CTAEFLNVYEKNEHEEQHMHHPNHGETMEENNAT 165
Score = 31.1 bits (67), Expect = 0.45
Identities = 15/68 (22%), Positives = 31/68 (45%)
Frame = +3
Query: 156 KAKMNVNKHFKNYILFGDVESHCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQ 335
K + +H + + G+ + C +CN +F ++ H++ H K K C +F
Sbjct: 81 KYPSKITEHIRKHT--GEKPNVCSICNISFSQAHTLKTHMQQHAHEKPYKCSFCTAEFLN 138
Query: 336 DFIYKLNK 359
+Y+ N+
Sbjct: 139 --VYEKNE 144
>Z82090-4|CAB05008.2| 543|Caenorhabditis elegans Hypothetical
protein ZK337.2 protein.
Length = 543
Score = 31.1 bits (67), Expect = 0.45
Identities = 19/94 (20%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Frame = +3
Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKF-KQDFI------YKLNKIYYCAIC 380
C +C+++F + +H+R K TC F + D + + K Y C +C
Sbjct: 371 CNMCSKSFSRSDMLTRHMRLHTGAKPYSCPTCNQVFSRSDHLSTHLRTHTGEKPYACPMC 430
Query: 381 NYCTQDIKSLTNHVNDETHKTNKANPENVNKTSI 482
NY ++ H+ + + + +++ SI
Sbjct: 431 NYSASRRDMISRHMRTHSLTDDSSISTPISQLSI 464
>AF016437-1|AAB65884.2| 690|Caenorhabditis elegans Hypothetical
protein F13H6.1 protein.
Length = 690
Score = 27.9 bits (59), Expect = 4.2
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +3
Query: 171 VNKHFKNYILFGDVESHCLLCNETFQSLSQVEKHIR 278
+ +H + + G HC +C F S +EKH+R
Sbjct: 537 LTRHMRTHGQQGKETYHCYICRMPFSVHSTLEKHMR 572
Score = 27.1 bits (57), Expect(2) = 0.59
Identities = 11/35 (31%), Positives = 16/35 (45%)
Frame = +3
Query: 213 ESHCLLCNETFQSLSQVEKHIRWENHRKSVKIQTC 317
+ C CN+ F + S + H+R K K Q C
Sbjct: 493 KERCNFCNKVFTNRSNLIVHLRSHTGEKPYKCQLC 527
Score = 22.2 bits (45), Expect(2) = 0.59
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHV 422
K Y C +C Y LT H+
Sbjct: 520 KPYKCQLCPYACAQSSKLTRHM 541
>U00041-1|AAA50671.3| 2248|Caenorhabditis elegans Abnormal cell
lineage protein 13 protein.
Length = 2248
Score = 30.3 bits (65), Expect = 0.78
Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Frame = +3
Query: 168 NVNKHFKNYILFGDVESHCLLCNETFQSLSQVEKHIRWENHRK-SVKIQTCVPKFKQDFI 344
N K+ K+ + GD C+ C+ + + ++ H++ +K TC+ F D
Sbjct: 1612 NQPKYQKHMAIHGDTCLTCIHCSGIAFNHTAIQNHMKSHEEKKVRYSCGTCLCTFASDLA 1671
Query: 345 --------YKLNKIYYCAICNYCTQDIKSLTNHVN 425
+ ++ Y+C +C + + S+ H++
Sbjct: 1672 LFDHLSVAHGVSLYYFCKVCGFGSTSADSVFQHIS 1706
>AF245435-1|AAF87497.1| 2248|Caenorhabditis elegans zinc finger
protein LIN-13 protein.
Length = 2248
Score = 30.3 bits (65), Expect = 0.78
Identities = 18/95 (18%), Positives = 41/95 (43%), Gaps = 9/95 (9%)
Frame = +3
Query: 168 NVNKHFKNYILFGDVESHCLLCNETFQSLSQVEKHIRWENHRK-SVKIQTCVPKFKQDFI 344
N K+ K+ + GD C+ C+ + + ++ H++ +K TC+ F D
Sbjct: 1612 NQPKYQKHMAIHGDTCLTCIHCSGIAFNHTAIQNHMKSHEEKKVRYSCGTCLCTFASDLA 1671
Query: 345 --------YKLNKIYYCAICNYCTQDIKSLTNHVN 425
+ ++ Y+C +C + + S+ H++
Sbjct: 1672 LFDHLSVAHGVSLYYFCKVCGFGSTSADSVFQHIS 1706
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 29.5 bits (63), Expect = 1.4
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = +3
Query: 363 YYCAICNYCTQDIKSLTNHVNDETHKTNKANPENVNKTSI 482
+YC +C+ +D + +H+N + H+ N K+++
Sbjct: 90 FYCDVCDCVVKDSINFLDHINGKNHQRNIGMSMKTKKSTV 129
>U80837-2|AAB37902.1| 315|Caenorhabditis elegans Hypothetical
protein F07E5.2 protein.
Length = 315
Score = 29.1 bits (62), Expect = 1.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +3
Query: 195 ILFGDVESHCLLCNETFQSLSQVEKHIR 278
ILF D+E H +L N F+ ++ +EK R
Sbjct: 241 ILFNDIERHLVLENVIFKGINYIEKRNR 268
>U41542-2|AAR30212.1| 623|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform b protein.
Length = 623
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +3
Query: 294 KSVKIQTCVPKFKQDFIYKLNKIYYCAICNYCTQDIKSLTNHVNDETHKTNKA 452
K + C F Q I+ + Y C C Y + ++ SL H K+ ++
Sbjct: 238 KKKLVMKCGTVFGQRLIHDNTQYYLCRNCPYVSWNVSSLWRHFRHHIQKSKQS 290
>U41542-1|AAR30211.1| 684|Caenorhabditis elegans Suppressor of
presenilin defectprotein 3, isoform a protein.
Length = 684
Score = 28.7 bits (61), Expect = 2.4
Identities = 13/53 (24%), Positives = 22/53 (41%)
Frame = +3
Query: 294 KSVKIQTCVPKFKQDFIYKLNKIYYCAICNYCTQDIKSLTNHVNDETHKTNKA 452
K + C F Q I+ + Y C C Y + ++ SL H K+ ++
Sbjct: 238 KKKLVMKCGTVFGQRLIHDNTQYYLCRNCPYVSWNVSSLWRHFRHHIQKSKQS 290
>U41020-1|AAA82331.2| 470|Caenorhabditis elegans Hypothetical
protein T27B1.2 protein.
Length = 470
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +3
Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKF-KQDFIYKLNKIYYCA---ICNYC 389
C LC+ F S ++E+H +K + TC +F ++ ++ +I+ A +C C
Sbjct: 86 CNLCSSKFGSKMELEEHQNSHTGQKPFECDTCNARFNRRSTLWNHKRIHSDAKPFVCTVC 145
Query: 390 TQDIK 404
K
Sbjct: 146 QMTFK 150
>U23454-9|AAC46522.2| 249|Caenorhabditis elegans Hypothetical
protein C10A4.8 protein.
Length = 249
Score = 28.7 bits (61), Expect = 2.4
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 7/79 (8%)
Frame = +3
Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQD-------FIYKLNKIYYCAIC 380
C +C++TF + + H R K K + C F+Q + K Y C +C
Sbjct: 170 CDVCDKTFSRSNTLITHKRIHTGEKPFKCEHCGRAFRQPGNLTRHRLTHTTVKPYVCGLC 229
Query: 381 NYCTQDIKSLTNHVNDETH 437
+ +L H+ T+
Sbjct: 230 DKAFNRASNLHTHMRTHTN 248
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 234 NETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQDFIYKLNKIYYCAICNYC 389
N +FQ +SQ +++ R+ +++ + C P F QDF + LN+ Y + YC
Sbjct: 6 NHSFQ-VSQGDRY-RFPSNQFGYGLSNCSPYFLQDFTHVLNR--YMQLEAYC 53
>Z83227-4|CAB05729.2| 336|Caenorhabditis elegans Hypothetical
protein F45B8.4 protein.
Length = 336
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Frame = +3
Query: 219 HCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQD-------FIYKLNKIYYCAI 377
HC C + F +++ +E+H + K + + C FK+ I+ + Y C
Sbjct: 127 HCQKCTKLFSTIAALEQHQQVHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEY 186
Query: 378 CN---YCTQDIKSLTN-HVNDETHK 440
C + D+K T H ++ HK
Sbjct: 187 CGKRFHQKSDMKKHTYIHTGEKPHK 211
>U63996-1|AAC47234.1| 336|Caenorhabditis elegans zinc finger
protein PAG-3 protein.
Length = 336
Score = 28.3 bits (60), Expect = 3.2
Identities = 20/85 (23%), Positives = 36/85 (42%), Gaps = 11/85 (12%)
Frame = +3
Query: 219 HCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQD-------FIYKLNKIYYCAI 377
HC C + F +++ +E+H + K + + C FK+ I+ + Y C
Sbjct: 127 HCQKCTKLFSTIAALEQHQQVHVSDKQFECKQCGKTFKRSSTLSTHLLIHSDTRPYPCEY 186
Query: 378 CN---YCTQDIKSLTN-HVNDETHK 440
C + D+K T H ++ HK
Sbjct: 187 CGKRFHQKSDMKKHTYIHTGEKPHK 211
>U29378-5|AAA68725.2| 355|Caenorhabditis elegans Hypothetical
protein F08C6.6 protein.
Length = 355
Score = 28.3 bits (60), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 174 NKHFKNYILFGDVESHCLLCNETFQSLSQVEKHIRWEN 287
N +F N++LFG V + F S+ E+HI N
Sbjct: 6 NSNFFNFLLFGFVTAIAFYSGTQFNKSSEQEEHINHAN 43
>AL021469-3|CAA16290.2| 435|Caenorhabditis elegans Hypothetical
protein Y116A8B.5 protein.
Length = 435
Score = 28.3 bits (60), Expect = 3.2
Identities = 18/71 (25%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Frame = -1
Query: 473 FVYILGIRFVSLMCFIIYMVCQ*FDILCAI----VAYCTIIYFVQLIDEILLEFRYTRLN 306
F+Y+LG+ V L+ I+++ D+L VA C + +F + ++++L F T L+
Sbjct: 78 FIYVLGLSIVDLL-VILHLPFLVVDLLKGQWLFGVAMCKVYWFGESVNKLLSSFLMTVLS 136
Query: 305 FYTFPVIFPTN 273
+ + + N
Sbjct: 137 WDRYMAVCSPN 147
>AL021447-3|CAA16274.1| 459|Caenorhabditis elegans Hypothetical
protein F19B2.7 protein.
Length = 459
Score = 27.9 bits (59), Expect = 4.2
Identities = 10/32 (31%), Positives = 15/32 (46%)
Frame = +3
Query: 387 CTQDIKSLTNHVNDETHKTNKANPENVNKTSI 482
C D + + +N+E K N NP VN +
Sbjct: 127 CEHDSQDIQEDINEEQRKINNTNPTIVNNQEV 158
>AC024877-2|AAF60905.2| 608|Caenorhabditis elegans Hypothetical
protein Y95B8A.7 protein.
Length = 608
Score = 27.9 bits (59), Expect = 4.2
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 210 VESHCLLCNETFQSLSQVEKHIRWENHRKSVK 305
V+ HC LC+ F + E HI+ HR S +
Sbjct: 173 VQFHCKLCDCKFSDPNAKEIHIKGRRHRVSYR 204
>Z68108-14|CAA92133.3| 2066|Caenorhabditis elegans Hypothetical
protein T05A10.1a protein.
Length = 2066
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 1286 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 1327
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 1297 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 1329
>Z68108-13|CAF31493.1| 2048|Caenorhabditis elegans Hypothetical
protein T05A10.1f protein.
Length = 2048
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 1354 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 1395
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 1365 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 1397
>Z68108-12|CAF31492.1| 2101|Caenorhabditis elegans Hypothetical
protein T05A10.1e protein.
Length = 2101
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 1354 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 1395
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 1365 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 1397
>Z68108-11|CAF31491.1| 2134|Caenorhabditis elegans Hypothetical
protein T05A10.1d protein.
Length = 2134
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 1354 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 1395
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 1365 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 1397
>Z68108-10|CAF31490.1| 1888|Caenorhabditis elegans Hypothetical
protein T05A10.1g protein.
Length = 1888
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 1354 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 1395
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 1365 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 1397
>Z68108-9|CAF31489.1| 1927|Caenorhabditis elegans Hypothetical protein
T05A10.1i protein.
Length = 1927
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 1354 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 1395
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 1365 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 1397
>Z68108-8|CAF31488.1| 1509|Caenorhabditis elegans Hypothetical protein
T05A10.1j protein.
Length = 1509
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 1354 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 1395
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 1365 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 1397
>Z68108-7|CAF31487.1| 1692|Caenorhabditis elegans Hypothetical protein
T05A10.1c protein.
Length = 1692
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 912 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 953
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 923 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 955
>Z68108-6|CAF31486.1| 537|Caenorhabditis elegans Hypothetical
protein T05A10.1h protein.
Length = 537
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 2 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 43
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 13 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 45
>U23526-2|AAK95867.1| 281|Caenorhabditis elegans Claudin-like in
caenorhabditisprotein 5 protein.
Length = 281
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 475 VLFTFSGFALLVLCVSSFTWFVN 407
+L F+GFA L+LCVS + VN
Sbjct: 138 MLDVFAGFASLLLCVSLIVFMVN 160
>L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical
protein ZK686.5 protein.
Length = 202
Score = 27.5 bits (58), Expect = 5.5
Identities = 22/96 (22%), Positives = 39/96 (40%), Gaps = 10/96 (10%)
Frame = +3
Query: 162 KMNVNKHFKNYILFGDVESHCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQDF 341
K + K K + V ++C LC + F S + H ++ ++ C+ F Q
Sbjct: 92 KQDREKAMKRKVTETIVTTYCELCEQNFSSSKMLLLHRGKVHNTPYIECHLCMKLFSQTI 151
Query: 342 IYKLN---------KIY-YCAICNYCTQDIKSLTNH 419
+ + KIY C +C+ +D +SL H
Sbjct: 152 QFNRHMKTHYGPNAKIYVQCELCDRQFKDKQSLRTH 187
>AY390552-1|AAQ94964.1| 557|Caenorhabditis elegans SMA-9 class III
protein.
Length = 557
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 402 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 443
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 413 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 445
>AY390551-1|AAQ94963.1| 926|Caenorhabditis elegans SMA-9 class IIc
protein.
Length = 926
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 353 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 394
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 364 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 396
>AY390550-1|AAQ94962.1| 537|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 537
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 2 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 43
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 13 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 45
>AY390545-1|AAQ94957.1| 792|Caenorhabditis elegans SMA-9 class IIb
protein.
Length = 792
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/45 (26%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 171 VNKHFKNYILFGDVES-HCLLCNETFQSLSQVEKHIRWENHRKSV 302
+ KH K++ DV + +C CN +F++ + KH+ + H++ +
Sbjct: 257 LKKHIKSHT---DVRAFNCTACNFSFKTKGNLTKHLSSKTHQRRI 298
Score = 27.5 bits (58), Expect = 5.5
Identities = 9/33 (27%), Positives = 19/33 (57%)
Frame = +3
Query: 357 KIYYCAICNYCTQDIKSLTNHVNDETHKTNKAN 455
+ + C CN+ + +LT H++ +TH+ +N
Sbjct: 268 RAFNCTACNFSFKTKGNLTKHLSSKTHQRRISN 300
>AF252605-1|AAF67351.1| 281|Caenorhabditis elegans Gas3/PMP22-like
protein protein.
Length = 281
Score = 27.5 bits (58), Expect = 5.5
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -2
Query: 475 VLFTFSGFALLVLCVSSFTWFVN 407
+L F+GFA L+LCVS + VN
Sbjct: 138 MLDVFAGFASLLLCVSLIVFMVN 160
>AF101318-8|AAC69343.2| 342|Caenorhabditis elegans Hypothetical
protein Y73C8C.2 protein.
Length = 342
Score = 27.5 bits (58), Expect = 5.5
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = -3
Query: 306 FLHFSCDFPNEYAFRLD-LKTGRFHYTADNDSPHLQIICNS*NAYSHSSWPS 154
F HF FPNE + + +K GR+ D D L +C+ + + ++ PS
Sbjct: 109 FTHFDAGFPNELNYVAENVKNGRWQTRDDQD--ELAFVCSYDPSLTTTTAPS 158
>Z77664-1|CAB01216.2| 900|Caenorhabditis elegans Hypothetical
protein F53H10.2 protein.
Length = 900
Score = 27.1 bits (57), Expect = 7.3
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +3
Query: 363 YYCAICNYCTQDIKSLTNHVNDETHK 440
++C +C+ C + +KSL H+ K
Sbjct: 736 FHCRLCDKCFEKVKSLNAHMKSHAMK 761
>U41534-6|AAB47598.1| 375|Caenorhabditis elegans Hypothetical
protein C16A3.4 protein.
Length = 375
Score = 27.1 bits (57), Expect = 7.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = +3
Query: 366 YCAICNYCTQDIKSLTNHVNDETHKTNKANPEN 464
YC C + ++T+HV + HK N+ E+
Sbjct: 72 YCKACRKSIKSENAMTDHVASKKHKENEKKIED 104
>AC006625-13|ABI18147.1| 273|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform b protein.
Length = 273
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 8/81 (9%)
Frame = +3
Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQDF-------IYKLNKIYYCAIC 380
C C + F + + H R K C F Q + + Y CA C
Sbjct: 168 CQTCGKAFSQAANLTAHKRIHTGEKPFMCPVCNRPFSQSSSLVTHRRTHTGERPYPCAQC 227
Query: 381 NYCTQDIKSLTNHVNDET-HK 440
D +LT H+ T HK
Sbjct: 228 EKAFTDSSTLTKHLRTHTGHK 248
>AC006625-12|AAK68272.2| 214|Caenorhabditis elegans Abnormal
chemotaxis protein 1,isoform a protein.
Length = 214
Score = 27.1 bits (57), Expect = 7.3
Identities = 20/81 (24%), Positives = 27/81 (33%), Gaps = 8/81 (9%)
Frame = +3
Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQDF-------IYKLNKIYYCAIC 380
C C + F + + H R K C F Q + + Y CA C
Sbjct: 109 CQTCGKAFSQAANLTAHKRIHTGEKPFMCPVCNRPFSQSSSLVTHRRTHTGERPYPCAQC 168
Query: 381 NYCTQDIKSLTNHVNDET-HK 440
D +LT H+ T HK
Sbjct: 169 EKAFTDSSTLTKHLRTHTGHK 189
>Z78415-11|CAL36495.1| 435|Caenorhabditis elegans Hypothetical
protein C17G1.3b protein.
Length = 435
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 390 TQDIKSLTNHVNDET-HKTNKANPENVNKT 476
T++ + L H E HKT+ ANPE + KT
Sbjct: 306 TRNAEMLKRHGGAEVLHKTDLANPETLRKT 335
>Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical
protein C17G1.3a protein.
Length = 530
Score = 26.6 bits (56), Expect = 9.7
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +3
Query: 390 TQDIKSLTNHVNDET-HKTNKANPENVNKT 476
T++ + L H E HKT+ ANPE + KT
Sbjct: 401 TRNAEMLKRHGGAEVLHKTDLANPETLRKT 430
>U80842-5|AAK71419.2| 305|Caenorhabditis elegans Serpentine
receptor, class i protein50 protein.
Length = 305
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/43 (27%), Positives = 19/43 (44%)
Frame = +3
Query: 360 IYYCAICNYCTQDIKSLTNHVNDETHKTNKANPENVNKTSIGK 488
+ YC ICN+ T D+ + V + N +V T I +
Sbjct: 203 VLYCIICNFATYDMLLMLKEVQLKVSNQNYKRHRSVLTTLIAQ 245
>U39997-9|AAA81101.2| 468|Caenorhabditis elegans Hypothetical
protein F56D1.1 protein.
Length = 468
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 171 VNKHFKNYILFGDVESHCLLCNETFQSLSQVEKHIRWENHRKSVK-IQTCVPKFKQDF 341
+ KH ++ + GD C +C +TF + KH+R + S K +++ PK ++ +
Sbjct: 338 IRKHSRSRV-HGDFS--CEICLKTFTLRDNLRKHVRVYHSENSQKVVKSTGPKHQEQY 392
>AF000263-13|AAO21393.1| 695|Caenorhabditis elegans Hypothetical
protein T08B2.5g protein.
Length = 695
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/37 (24%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 198 LFGDVESHCLLCNETFQSLSQVEKHI-RWENHRKSVK 305
L+ + + C+LC F + + KH+ + + HR +++
Sbjct: 505 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLE 541
>AF000263-12|AAO21392.1| 838|Caenorhabditis elegans Hypothetical
protein T08B2.5f protein.
Length = 838
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/37 (24%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 198 LFGDVESHCLLCNETFQSLSQVEKHI-RWENHRKSVK 305
L+ + + C+LC F + + KH+ + + HR +++
Sbjct: 648 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLE 684
>AF000263-11|AAL77184.1| 866|Caenorhabditis elegans Hypothetical
protein T08B2.5c protein.
Length = 866
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/37 (24%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 198 LFGDVESHCLLCNETFQSLSQVEKHI-RWENHRKSVK 305
L+ + + C+LC F + + KH+ + + HR +++
Sbjct: 676 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLE 712
>AF000263-8|AAK21461.1| 924|Caenorhabditis elegans Hypothetical
protein T08B2.5a protein.
Length = 924
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/37 (24%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 198 LFGDVESHCLLCNETFQSLSQVEKHI-RWENHRKSVK 305
L+ + + C+LC F + + KH+ + + HR +++
Sbjct: 734 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLE 770
>AF000263-7|AAK21463.1| 925|Caenorhabditis elegans Hypothetical
protein T08B2.5b protein.
Length = 925
Score = 26.6 bits (56), Expect = 9.7
Identities = 9/37 (24%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 198 LFGDVESHCLLCNETFQSLSQVEKHI-RWENHRKSVK 305
L+ + + C+LC F + + KH+ + + HR +++
Sbjct: 735 LYDETKKTCMLCKRAFSDVEVLRKHVEKSDLHRNNLE 771
>AC024826-17|AAF60789.1| 662|Caenorhabditis elegans Hypothetical
protein Y55F3AM.14 protein.
Length = 662
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 297 FSCDF-PNEYAFRLDLKTGRFHYTADNDSPHLQIICNS*NAYSHS 166
F CDF P +A + LK N+ H+ + CN AY+ S
Sbjct: 216 FRCDFCPKTFALKNYLKLHVKQVHEQNERKHVCVYCNKGFAYAGS 260
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,297,828
Number of Sequences: 27780
Number of extensions: 241816
Number of successful extensions: 811
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 738
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 914086948
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -