Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_O22
         (488 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    32   0.004
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    27   0.14 
L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    25   0.57 
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    23   1.3  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    23   1.7  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    22   3.1  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    22   4.0  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   4.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   4.0  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    21   5.3  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    21   9.3  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   9.3  

>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 31.9 bits (69), Expect = 0.004
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 7/88 (7%)
 Frame = +3

Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKFKQDFIYKLN-------KIYYCAIC 380
           C  C + F    Q++ H R     K      C   F  + + KL+       K+Y C +C
Sbjct: 206 CKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGKSFGYNHVLKLHQVAHYGEKVYKCTLC 265

Query: 381 NYCTQDIKSLTNHVNDETHKTNKANPEN 464
           +      K++  H+   +  +   +P +
Sbjct: 266 HETFGSKKTMELHIKTHSDSSVVGSPRD 293



 Score = 29.9 bits (64), Expect = 0.015
 Identities = 19/92 (20%), Positives = 38/92 (41%), Gaps = 7/92 (7%)
 Frame = +3

Query: 180 HFKNYILFGDVESHCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPKF--KQDF---- 341
           H +++   G+    C +C +TF   +++ +H R     K  + + C   F  K++     
Sbjct: 80  HLRSHGKEGEDPYRCNICGKTFAVPARLTRHYRTHTGEKPYQCEYCSKSFSVKENLSVHR 139

Query: 342 -IYKLNKIYYCAICNYCTQDIKSLTNHVNDET 434
            I+   + Y C +C    +    L  H+   T
Sbjct: 140 RIHTKERPYKCDVCERAFEHSGKLHRHMRIHT 171



 Score = 27.9 bits (59), Expect = 0.061
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 201 FGDVESHCLLCNETFQSLSQVEKHIR 278
           +G+    C LC+ETF S   +E HI+
Sbjct: 255 YGEKVYKCTLCHETFGSKKTMELHIK 280



 Score = 23.8 bits (49), Expect = 1.00
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +3

Query: 204 GDVESHCLLCNETFQSLSQVEKHIRWENHRKSVKIQTC 317
           G+    C +C++TF    Q+  H+R     K    + C
Sbjct: 172 GERPHKCTVCSKTFIQSGQLVIHMRTHTGEKPYVCKAC 209



 Score = 22.6 bits (46), Expect = 2.3
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 222 CLLCNETFQSLSQVEKHIR 278
           CLLC + F   +  + H+R
Sbjct: 64  CLLCQKAFDQKNLYQSHLR 82


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 26.6 bits (56), Expect = 0.14
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
 Frame = +3

Query: 180 HFKNYILF--GDVESHCLLCNETFQSLSQVEKHIRWENHRKSVKIQTCVPK 326
           H K ++    G+   HC  C+  F  ++ + +H+R     +    + C  K
Sbjct: 24  HLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELCAAK 74


>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 24.6 bits (51), Expect = 0.57
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = +3

Query: 363 YYCAICNYCTQDIKSLTNHVNDETH 437
           Y CA C Y T+   SL  H+   +H
Sbjct: 45  YRCANCTYATKYCHSLKLHLRKYSH 69


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 411 TNHVNDETHKTNKANPEN 464
           TN+ ND   K NK N  N
Sbjct: 426 TNNQNDNNQKNNKKNANN 443


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 23.0 bits (47), Expect = 1.7
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 213 ESHCLLCNETFQSLSQVEKHIRWENHRKS 299
           E  C  CN+   SL+++ +HI+  + R S
Sbjct: 2   EFRCEPCNKILTSLTRLRRHIQNVHTRPS 30


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = +3

Query: 222 CLLCNETFQSLSQVEKHIRWENHRKSVKIQTC 317
           C LC + F     ++ HIR     K    Q C
Sbjct: 45  CHLCGKAFSRPWLLQGHIRTHTGEKPFSCQHC 76


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
           finger domain-Z3 isoform protein.
          Length = 92

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +3

Query: 333 QDFIYKLNKIYYCAICNYCTQDIKSLTNH 419
           QD   + + +Y C  CN   +   SLT H
Sbjct: 26  QDKHEQSDTLYVCEFCNRRYRTKNSLTTH 54


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 369 CAICNYCTQDIKSLTNH 419
           CA+C+   + + SL NH
Sbjct: 404 CALCHKVFRTLNSLNNH 420


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 278 LGKSQEKCKNSNVCT 322
           +GK+  KC N NV T
Sbjct: 704 IGKALSKCHNRNVTT 718


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +3

Query: 117 SSLS*KIIYTFN*KAKMNVNKHFKNY 194
           SSLS K I+  N     N N ++ NY
Sbjct: 316 SSLSNKTIHNNNNYNNNNYNNNYNNY 341


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 4/12 (33%), Positives = 11/12 (91%)
 Frame = -1

Query: 449 FVSLMCFIIYMV 414
           F++++CF+ Y++
Sbjct: 418 FIAIVCFVSYLI 429


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 4/12 (33%), Positives = 11/12 (91%)
 Frame = -1

Query: 449 FVSLMCFIIYMV 414
           F++++CF+ Y++
Sbjct: 471 FIAIVCFVSYLI 482


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,687
Number of Sequences: 438
Number of extensions: 3580
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13421061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)