Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_O21
(528 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein. 33 0.62
BC017731-1|AAH17731.1| 887|Homo sapiens oxysterol binding prote... 31 1.9
AY008372-1|AAG23400.1| 887|Homo sapiens oxysterol binding prote... 31 1.9
AF491784-1|AAM27389.1| 820|Homo sapiens oxysterol binding prote... 31 1.9
AF491783-1|AAM27388.1| 851|Homo sapiens oxysterol binding prote... 31 1.9
AF491782-1|AAM27387.1| 856|Homo sapiens oxysterol binding prote... 31 1.9
AF491781-1|AAM27386.1| 887|Homo sapiens oxysterol binding prote... 31 1.9
AF392444-1|AAL40657.1| 887|Homo sapiens oxysterol-binding prote... 31 1.9
AB014604-1|BAA31679.2| 919|Homo sapiens KIAA0704 protein protein. 31 1.9
>X87248-1|CAA60698.1| 341|Homo sapiens HP8 peptide protein.
Length = 341
Score = 33.1 bits (72), Expect = 0.62
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Frame = -1
Query: 264 SGPSIRTYSCSKFRRDRF---SWTMVAEYKRSTSISQRTYRWLATLRP-IWPFRACSFD* 97
SGP +R + R R SW A S +R T RP WP R CS
Sbjct: 137 SGPGLRPLVIKQEPRGRMKPSSWRWPACSLTSRRRRRRPRTRTRTRRPRTWPPRTCSSRS 196
Query: 96 QALRPCSCQCCPI*ATR*PVAC---EPLVESLPSC 1
+ C C P+ R P C P S+P+C
Sbjct: 197 RTAARPPCTCSPVTPRRRPRPCPARTPRPRSVPAC 231
>BC017731-1|AAH17731.1| 887|Homo sapiens oxysterol binding
protein-like 3 protein.
Length = 887
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 160 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 270
P+G T TL VFGDH +TS + +S RW Y
Sbjct: 666 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 703
>AY008372-1|AAG23400.1| 887|Homo sapiens oxysterol binding
protein-related protein 3 protein.
Length = 887
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 160 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 270
P+G T TL VFGDH +TS + +S RW Y
Sbjct: 666 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 703
>AF491784-1|AAM27389.1| 820|Homo sapiens oxysterol binding
protein-related protein 3 isoform 1d protein.
Length = 820
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 160 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 270
P+G T TL VFGDH +TS + +S RW Y
Sbjct: 599 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 636
>AF491783-1|AAM27388.1| 851|Homo sapiens oxysterol binding
protein-related protein 3 isoform 1c protein.
Length = 851
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 160 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 270
P+G T TL VFGDH +TS + +S RW Y
Sbjct: 630 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 667
>AF491782-1|AAM27387.1| 856|Homo sapiens oxysterol binding
protein-related protein 3 isoform 1b protein.
Length = 856
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 160 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 270
P+G T TL VFGDH +TS + +S RW Y
Sbjct: 635 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 672
>AF491781-1|AAM27386.1| 887|Homo sapiens oxysterol binding
protein-related protein 3 isoform 1a protein.
Length = 887
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 160 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 270
P+G T TL VFGDH +TS + +S RW Y
Sbjct: 666 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 703
>AF392444-1|AAL40657.1| 887|Homo sapiens oxysterol-binding
protein-like protein OSBPL3 protein.
Length = 887
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 160 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 270
P+G T TL VFGDH +TS + +S RW Y
Sbjct: 666 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 703
>AB014604-1|BAA31679.2| 919|Homo sapiens KIAA0704 protein protein.
Length = 919
Score = 31.5 bits (68), Expect = 1.9
Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 160 PLGNTRATL-VFGDHRPRKSITSELRARISTDRWAALY 270
P+G T TL VFGDH +TS + +S RW Y
Sbjct: 698 PIGTTHVTLPVFGDHFEWNKVTSCIHNILSGQRWIEHY 735
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,165,186
Number of Sequences: 237096
Number of extensions: 1245781
Number of successful extensions: 2189
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2182
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5103531180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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