Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_O21
         (528 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    26   0.27 
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              25   0.63 
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   7.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   7.8  

>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 25.8 bits (54), Expect = 0.27
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = -1

Query: 405 EIKMIYFFTK*TYKVKRDSIRNSMITVG 322
           EIK IY +    Y    D+IRN++I+ G
Sbjct: 17  EIKTIYSWNVIEYNFPNDNIRNTLISNG 44


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 24.6 bits (51), Expect = 0.63
 Identities = 12/34 (35%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +3

Query: 84   GVMLVSQNCTREKAK-SV*VSQASGTSAGKYSCY 182
            G +L S +  R+  + S+ + +   T AG+YSCY
Sbjct: 1314 GAVLQSSDRLRQLPEGSLFIKEVDRTDAGEYSCY 1347


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 144 QASGTSAGKYSCYAC 188
           +ASG   G YSC  C
Sbjct: 116 RASGKHYGVYSCEGC 130


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 144 QASGTSAGKYSCYAC 188
           +ASG   G YSC  C
Sbjct: 116 RASGKHYGVYSCEGC 130


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,088
Number of Sequences: 438
Number of extensions: 2967
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)