Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_O16
         (631 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein.     32   1.9  
AK090476-1|BAC03457.1|  660|Homo sapiens FLJ00398 protein protein.     32   1.9  
AK090431-1|BAC03412.1|  778|Homo sapiens FLJ00348 protein protein.     32   1.9  

>AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein.
          Length = 1065

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 252 LLSNVIRCSTGPSLEVKLCFRPRVSSSIPGNLLD 151
           L++N+IR +  P + + +  RP  S  IPG L+D
Sbjct: 248 LITNIIRGNLFPEVSIWITSRPSASGQIPGGLVD 281


>AK090476-1|BAC03457.1|  660|Homo sapiens FLJ00398 protein protein.
          Length = 660

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 252 LLSNVIRCSTGPSLEVKLCFRPRVSSSIPGNLLD 151
           L++N+IR +  P + + +  RP  S  IPG L+D
Sbjct: 230 LITNIIRGNLFPEVSIWITSRPSASGQIPGGLVD 263


>AK090431-1|BAC03412.1|  778|Homo sapiens FLJ00348 protein protein.
          Length = 778

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = -2

Query: 252 LLSNVIRCSTGPSLEVKLCFRPRVSSSIPGNLLD 151
           L++N+IR +  P + + +  RP  S  IPG L+D
Sbjct: 265 LITNIIRGNLFPEVSIWITSRPSASGQIPGGLVD 298


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,475,834
Number of Sequences: 237096
Number of extensions: 1747161
Number of successful extensions: 4665
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4663
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)