Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_O06
         (265 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3523|AAF51713.2| 1737|Drosophila melanogaster CG32436-P...    26   8.3  

>AE014296-3523|AAF51713.2| 1737|Drosophila melanogaster CG32436-PA
            protein.
          Length = 1737

 Score = 25.8 bits (54), Expect = 8.3
 Identities = 10/29 (34%), Positives = 13/29 (44%)
 Frame = -2

Query: 123  LFQGNRRIHAPCHYFQCISLLRYKLIYGF 37
            L   N R+   C  F C+   RY  +Y F
Sbjct: 977  LLVDNNRLLLVCQRFSCVIFKRYNFVYMF 1005


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,036,046
Number of Sequences: 53049
Number of extensions: 188888
Number of successful extensions: 291
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 291
length of database: 24,988,368
effective HSP length: 66
effective length of database: 21,487,134
effective search space used: 451229814
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)