BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_O03
(523 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058481-1|AAL13710.1| 233|Drosophila melanogaster GM01970p pro... 55 7e-08
AE014297-1149|AAF54530.3| 233|Drosophila melanogaster CG4043-PA... 55 7e-08
AY071632-1|AAL49254.1| 246|Drosophila melanogaster RE67757p pro... 37 0.014
AE014134-2303|AAF53263.1| 246|Drosophila melanogaster CG15481-P... 37 0.014
U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein. 29 5.1
BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p pro... 29 5.1
AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-P... 29 5.1
>AY058481-1|AAL13710.1| 233|Drosophila melanogaster GM01970p
protein.
Length = 233
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +3
Query: 150 LKPMKCELNFLSKSDGSAILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSG 329
L+ M CE N LS+ DGS + +QG T + +V GP+++K Q ++ LE + K+G
Sbjct: 14 LRQMHCEFNPLSRCDGSVMYSQGATGLIGAVLGPIEVKTQNLS--IDGSYLECNYRPKAG 71
Query: 330 TPSVADRYKENVIKRTCEVVV 392
P V DR +E I+ E+ +
Sbjct: 72 LPQVTDRIREAAIRDVLELAL 92
>AE014297-1149|AAF54530.3| 233|Drosophila melanogaster CG4043-PA
protein.
Length = 233
Score = 54.8 bits (126), Expect = 7e-08
Identities = 29/81 (35%), Positives = 46/81 (56%)
Frame = +3
Query: 150 LKPMKCELNFLSKSDGSAILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSG 329
L+ M CE N LS+ DGS + +QG T + +V GP+++K Q ++ LE + K+G
Sbjct: 14 LRQMHCEFNPLSRCDGSVMYSQGATGLIGAVLGPIEVKTQNLS--IDGSYLECNYRPKAG 71
Query: 330 TPSVADRYKENVIKRTCEVVV 392
P V DR +E I+ E+ +
Sbjct: 72 LPQVTDRIREAAIRDVLELAL 92
>AY071632-1|AAL49254.1| 246|Drosophila melanogaster RE67757p
protein.
Length = 246
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 150 LKPMKCELNFLSKSDGSAILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFS 317
L+ +KC+L + DGSA + QG T L +V GP K ++ S + + FS
Sbjct: 23 LRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGNQTESVINCQYSQATFS 78
>AE014134-2303|AAF53263.1| 246|Drosophila melanogaster CG15481-PA
protein.
Length = 246
Score = 37.1 bits (82), Expect = 0.014
Identities = 19/56 (33%), Positives = 29/56 (51%)
Frame = +3
Query: 150 LKPMKCELNFLSKSDGSAILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFS 317
L+ +KC+L + DGSA + QG T L +V GP K ++ S + + FS
Sbjct: 23 LRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGNQTESVINCQYSQATFS 78
>U25686-1|AAA83228.1| 1221|Drosophila melanogaster E93 protein.
Length = 1221
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 237 SVNGPLDIKMQKSXSYLEKCTLEVLFSCKSGTPSVADRYKENVIKRTCEVVVA 395
SV+ PLD+ + S + ++ + +C + TPS Y E + R + VVA
Sbjct: 293 SVDAPLDLSSKPSPNSSISGDVKSVRACATPTPSGRRAYSEEDLSRALQDVVA 345
>BT010034-1|AAQ22503.1| 1188|Drosophila melanogaster LP08695p
protein.
Length = 1188
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 237 SVNGPLDIKMQKSXSYLEKCTLEVLFSCKSGTPSVADRYKENVIKRTCEVVVA 395
SV+ PLD+ + S + ++ + +C + TPS Y E + R + VVA
Sbjct: 316 SVDAPLDLSSKPSPNSSISGDVKSVRACATPTPSGRRAYSEEDLSRALQDVVA 368
>AE014297-3075|AAF55940.3| 1165|Drosophila melanogaster CG18389-PA
protein.
Length = 1165
Score = 28.7 bits (61), Expect = 5.1
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +3
Query: 237 SVNGPLDIKMQKSXSYLEKCTLEVLFSCKSGTPSVADRYKENVIKRTCEVVVA 395
SV+ PLD+ + S + ++ + +C + TPS Y E + R + VVA
Sbjct: 293 SVDAPLDLSSKPSPNSSISGDVKSVRACATPTPSGRRAYSEEDLSRALQDVVA 345
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,485,161
Number of Sequences: 53049
Number of extensions: 380868
Number of successful extensions: 1058
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1058
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -