Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_O03
(523 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-6|CAA90109.1| 214|Caenorhabditis elegans Hypothetical pr... 48 5e-06
AY303579-1|AAP57301.1| 214|Caenorhabditis elegans cell death-re... 48 5e-06
Z73422-8|CAA97771.3| 240|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z82085-5|CAB04989.1| 342|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81147-4|CAB03529.1| 578|Caenorhabditis elegans Hypothetical pr... 27 8.1
U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protea... 27 8.1
U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protea... 27 8.1
U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protea... 27 8.1
L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-lik... 27 8.1
L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-lik... 27 8.1
AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical ... 27 8.1
AF038608-11|AAC25815.1| 319|Caenorhabditis elegans Serpentine r... 27 8.1
>Z49909-6|CAA90109.1| 214|Caenorhabditis elegans Hypothetical
protein C14A4.5 protein.
Length = 214
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 150 LKPMKCELNFLSKSDGSAILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSG 329
L+ M+CEL+FL +DGSA +QG T S +GP D+ K+ E TL++ + G
Sbjct: 5 LREMRCELSFLKNADGSACFSQGATCIWASCSGPGDVHASKASD--EAMTLDISYRANCG 62
>AY303579-1|AAP57301.1| 214|Caenorhabditis elegans cell
death-related nuclease 5 protein.
Length = 214
Score = 47.6 bits (108), Expect = 5e-06
Identities = 23/60 (38%), Positives = 34/60 (56%)
Frame = +3
Query: 150 LKPMKCELNFLSKSDGSAILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSG 329
L+ M+CEL+FL +DGSA +QG T S +GP D+ K+ E TL++ + G
Sbjct: 5 LREMRCELSFLKNADGSACFSQGATCIWASCSGPGDVHASKASD--EAMTLDISYRANCG 62
>Z73422-8|CAA97771.3| 240|Caenorhabditis elegans Hypothetical
protein B0564.1a protein.
Length = 240
Score = 28.3 bits (60), Expect = 3.5
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 6/117 (5%)
Frame = +3
Query: 150 LKPMKCELNFLSKSDGSAILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCK-- 323
++ + L ++GS L G T L +V GP + K K +KC + +S
Sbjct: 19 IRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYEGKSSKRIE--DKCAIVCQYSATKF 76
Query: 324 SG----TPSVADRYKENVIKRTCEVVVAGVRPXYPRPRELQSLFRNLKTMEGYSLAA 482
SG + DR K I R E V PR +F + +G +LAA
Sbjct: 77 SGLERKNRTRGDR-KSTEISRLLEKAFESVILTEAFPRSQLDIFCEVIQGDGSNLAA 132
>Z82085-5|CAB04989.1| 342|Caenorhabditis elegans Hypothetical
protein ZK218.6 protein.
Length = 342
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Frame = +3
Query: 219 ETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSGTP-SVADRYKENVI 368
+T+ L++ + P K+Q + +KCT E++ C + P S +R+ E ++
Sbjct: 255 KTLMLLTPSFPEQSKLQSTQKSRDKCTSELMKCCLAKFPLSGVERFGEIIL 305
>Z81147-4|CAB03529.1| 578|Caenorhabditis elegans Hypothetical
protein T09E11.5 protein.
Length = 578
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Frame = -1
Query: 130 FFVTPMVY*AFFYFSV--TAWKIVIRIDL*NFIVFNVSHFY 14
FF+ PM++ AFF +++ T +++ I FI+ +V Y
Sbjct: 236 FFLVPMIFLAFFKYAIHATVMRLIFTIFTGGFILCSVDGDY 276
>U41556-3|AAM51519.1| 378|Caenorhabditis elegans Cysteine protease
related protein6, isoform b protein.
Length = 378
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +3
Query: 201 AILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSGTPSVADRY--KENVIKR 374
A+ A + + + S +G L + + S L C F C G P A RY K+ ++
Sbjct: 137 AVEAMSDRICIAS-HGELQVTL--SADDLLSCCKSCGFGCNGGDPLAAWRYWVKDGIVTG 193
Query: 375 TCEVVVAGVRPXYPRP 422
+ G +P YP P
Sbjct: 194 SNYTANNGCKP-YPFP 208
>U41556-2|ABS19475.1| 369|Caenorhabditis elegans Cysteine protease
related protein6, isoform c protein.
Length = 369
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +3
Query: 201 AILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSGTPSVADRY--KENVIKR 374
A+ A + + + S +G L + + S L C F C G P A RY K+ ++
Sbjct: 128 AVEAMSDRICIAS-HGELQVTL--SADDLLSCCKSCGFGCNGGDPLAAWRYWVKDGIVTG 184
Query: 375 TCEVVVAGVRPXYPRP 422
+ G +P YP P
Sbjct: 185 SNYTANNGCKP-YPFP 199
>U41556-1|AAK39189.1| 379|Caenorhabditis elegans Cysteine protease
related protein6, isoform a protein.
Length = 379
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +3
Query: 201 AILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSGTPSVADRY--KENVIKR 374
A+ A + + + S +G L + + S L C F C G P A RY K+ ++
Sbjct: 138 AVEAMSDRICIAS-HGELQVTL--SADDLLSCCKSCGFGCNGGDPLAAWRYWVKDGIVTG 194
Query: 375 TCEVVVAGVRPXYPRP 422
+ G +P YP P
Sbjct: 195 SNYTANNGCKP-YPFP 209
>L39939-1|AAA98789.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +3
Query: 201 AILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSGTPSVADRY--KENVIKR 374
A+ A + + + S +G L + + S L C F C G P A RY K+ ++
Sbjct: 138 AVEAMSDRICIAS-HGELQVTL--SADDLLSCCKSCGFGCNGGDPLAAWRYWVKDGIVTG 194
Query: 375 TCEVVVAGVRPXYPRP 422
+ G +P YP P
Sbjct: 195 SNYTANNGCKP-YPFP 209
>L39894-1|AAA98787.1| 379|Caenorhabditis elegans cathepsin B-like
cysteine proteinaseprotein.
Length = 379
Score = 27.1 bits (57), Expect = 8.1
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +3
Query: 201 AILAQGETVALVSVNGPLDIKMQKSXSYLEKCTLEVLFSCKSGTPSVADRY--KENVIKR 374
A+ A + + + S +G L + + S L C F C G P A RY K+ ++
Sbjct: 138 AVEAMSDRICIAS-HGELQVTL--SADDLLSCCKSCGFGCNGGDPLAAWRYWVKDGIVTG 194
Query: 375 TCEVVVAGVRPXYPRP 422
+ G +P YP P
Sbjct: 195 SNYTANNGCKP-YPFP 209
>AF098996-2|AAC68711.3| 431|Caenorhabditis elegans Hypothetical
protein T11F1.6 protein.
Length = 431
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/59 (25%), Positives = 27/59 (45%)
Frame = +3
Query: 291 KCTLEVLFSCKSGTPSVADRYKENVIKRTCEVVVAGVRPXYPRPRELQSLFRNLKTMEG 467
KC L+ F+ T + + N + C ++ P +L+ LF+NL+T+ G
Sbjct: 30 KCDLQCTFNHSEITSKTTEFFPTNC-ETVCGILTFNSNTDMS-PSQLKQLFKNLRTLSG 86
>AF038608-11|AAC25815.1| 319|Caenorhabditis elegans Serpentine
receptor, class z protein79 protein.
Length = 319
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 130 FFVTPMVY*AFFYFSVTAWKIVIRIDL*NFIVFNVSHFY 14
F+++ ++Y F F V +K+ R D + VSHFY
Sbjct: 28 FYISTLLYLVIFPFYVYVFKLNRRRDRKTLLFPTVSHFY 66
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,844,339
Number of Sequences: 27780
Number of extensions: 206612
Number of successful extensions: 388
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 388
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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