Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_O01
(526 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB083611-1|BAB89324.1| 401|Homo sapiens putative G-protein coup... 57 4e-08
AK126616-1|BAC86614.1| 309|Homo sapiens protein ( Homo sapiens ... 39 0.009
AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens ... 33 0.81
AY273815-1|AAQ16156.1| 2623|Homo sapiens bone specific CMF608 pr... 30 4.3
BC014176-1|AAH14176.1| 640|Homo sapiens ubiquitin specific pept... 30 5.7
AL365205-13|CAI13188.1| 640|Homo sapiens ubiquitin specific pep... 30 5.7
AL365205-12|CAI13186.1| 585|Homo sapiens ubiquitin specific pep... 30 5.7
AL365205-11|CAI13187.1| 688|Homo sapiens ubiquitin specific pep... 30 5.7
AK074528-1|BAC11041.1| 145|Homo sapiens protein ( Homo sapiens ... 30 5.7
AJ586139-1|CAE51939.1| 688|Homo sapiens ubiquitin-specific prot... 30 5.7
X83961-1|CAA58791.1| 380|Homo sapiens transmembrane protein pro... 29 10.0
U19878-1|AAA64622.1| 380|Homo sapiens transmembrane protein pro... 29 10.0
>AB083611-1|BAB89324.1| 401|Homo sapiens putative G-protein coupled
receptor protein.
Length = 401
Score = 56.8 bits (131), Expect = 4e-08
Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Frame = +1
Query: 163 LCGAGYSVVQ-TTLWCRLLCGADY----SVVQTTLWCRLLCGACYSVVQTTLWCRLLCGA 327
LC G+SVV+ LW L CGA SVV+ +L R+ CG +SVV++ LC
Sbjct: 179 LCCGGFSVVEGCLLWRVLCCGASLLWRVSVVEGSLLWRVCCGG-FSVVES------LCCG 231
Query: 328 SYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADMCLSSSQI 507
+SVV+ +L R+LC +SV++ +L R+L +SVV +L R+ +C S +
Sbjct: 232 WFSVVEGSLLWRVLCCGWFSVMEGSLLWRVLSCGWFSVVDGSLLWRVSVVEGLCCGESVV 291
Query: 508 E 510
+
Sbjct: 292 D 292
Score = 52.4 bits (120), Expect = 9e-07
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 11/136 (8%)
Frame = +3
Query: 123 RLLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRL-----LCGADYSVVQTTLWCM--- 278
R+LC +SV++ +L R+L +SVV +L R+ LC + V + LW +
Sbjct: 243 RVLCCGWFSVMEGSLLWRVLSCGWFSVVDGSLLWRVSVVEGLCCGESVVDGSLLWRVSVV 302
Query: 279 --LLCGADYSVVQTTLWCILLCGADYPVVQTTLWCRLLCGADYSVVQ-TTLWCRLLCGAD 449
L CG + V + LW +L CG V + LW L CG +SVV + LW L CG
Sbjct: 303 EGLCCGWFFVVGGSLLWMVLCCGWFSVVNGSLLWMGLCCGG-FSVVDGSLLWMGLCCGG- 360
Query: 450 YSVVQTTLWCRHVSVV 497
S++ L VSVV
Sbjct: 361 -SLLWMVLCFGWVSVV 375
Score = 52.0 bits (119), Expect = 1e-06
Identities = 46/128 (35%), Positives = 67/128 (52%), Gaps = 12/128 (9%)
Frame = +3
Query: 129 LCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQ-TTLWCML----LCGA 293
LC +SVV+ +L R+LC +SV++ +L R+L +SVV + LW + LC
Sbjct: 228 LCCGWFSVVEGSLLWRVLCCGWFSVMEGSLLWRVLSCGWFSVVDGSLLWRVSVVEGLCCG 287
Query: 294 DYSVVQTTLWCI-----LLCGADYPVVQTTLWCRLLCGADYSVVQ-TTLWCRLLCGADYS 455
+ V + LW + L CG + V + LW L CG +SVV + LW L CG +S
Sbjct: 288 ESVVDGSLLWRVSVVEGLCCGWFFVVGGSLLWMVLCCGW-FSVVNGSLLWMGLCCGG-FS 345
Query: 456 VVQ-TTLW 476
VV + LW
Sbjct: 346 VVDGSLLW 353
Score = 50.4 bits (115), Expect = 4e-06
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Frame = +3
Query: 129 LCGADYSVVQ-TTLWCRLLCGAD----YSVVQTTLWCRLLCGADYSVVQTTLWCMLLCGA 293
LC +SVV+ LW L CGA SVV+ +L R+ CG +SVV++ LC
Sbjct: 179 LCCGGFSVVEGCLLWRVLCCGASLLWRVSVVEGSLLWRVCCGG-FSVVES------LCCG 231
Query: 294 DYSVVQ-TTLWCILLCGADYPVVQTTLWCRLLCGADYSVVQTTLWCRL-----LCGADYS 455
+SVV+ + LW +L CG + + LW L CG +SVV +L R+ LC +
Sbjct: 232 WFSVVEGSLLWRVLCCGWFSVMEGSLLWRVLSCGW-FSVVDGSLLWRVSVVEGLCCGESV 290
Query: 456 VVQTTLWCRHVSVV 497
V + LW VSVV
Sbjct: 291 VDGSLLW--RVSVV 302
Score = 50.0 bits (114), Expect = 5e-06
Identities = 46/135 (34%), Positives = 65/135 (48%), Gaps = 12/135 (8%)
Frame = +2
Query: 119 VQTTLWCRLLCGADYSVVQATLWCRLLCGADYSVVQTTLWCRL-----LCGADYSVVHAT 283
V+ +L R+LC +SV++ +L R+L +SVV +L R+ LC + V +
Sbjct: 236 VEGSLLWRVLCCGWFSVMEGSLLWRVLSCGWFSVVDGSLLWRVSVVEGLCCGESVVDGSL 295
Query: 284 LWC-----RLLCGADYSVVHPTLWCRLPCGADYSVVQ-TTLWCRLLCGADYSVVQ-TTLW 442
LW L CG + V LW L CG +SVV + LW L CG +SVV + LW
Sbjct: 296 LWRVSVVEGLCCGWFFVVGGSLLWMVLCCGW-FSVVNGSLLWMGLCCGG-FSVVDGSLLW 353
Query: 443 CRLLCGADYSVVQTC 487
L CG + C
Sbjct: 354 MGLCCGGSLLWMVLC 368
Score = 49.2 bits (112), Expect = 9e-06
Identities = 44/122 (36%), Positives = 62/122 (50%), Gaps = 11/122 (9%)
Frame = +2
Query: 146 LCGADYSVVQATLWCRLLCGADYSVVQTTLWCRLLCGADYSVVHATLWCRL-----LCGA 310
LC +SVV+ +L R+LC +SV++ +L R+L +SVV +L R+ LC
Sbjct: 228 LCCGWFSVVEGSLLWRVLCCGWFSVMEGSLLWRVLSCGWFSVVDGSLLWRVSVVEGLCCG 287
Query: 311 DYSVVHPTLWC-----RLPCGADYSVVQTTLWCRLLCGADYSVVQ-TTLWCRLLCGADYS 472
+ V LW L CG + V + LW L CG +SVV + LW L CG +S
Sbjct: 288 ESVVDGSLLWRVSVVEGLCCGWFFVVGGSLLWMVLCCGW-FSVVNGSLLWMGLCCGG-FS 345
Query: 473 VV 478
VV
Sbjct: 346 VV 347
Score = 46.0 bits (104), Expect = 8e-05
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
Frame = +2
Query: 146 LCGADYSVVQ-ATLWCRLLCGAD----YSVVQTTLWCRLLCGADYSVVHATLWCRLLCGA 310
LC +SVV+ LW L CGA SVV+ +L R+ CG +SVV + LC
Sbjct: 179 LCCGGFSVVEGCLLWRVLCCGASLLWRVSVVEGSLLWRVCCGG-FSVVES------LCCG 231
Query: 311 DYSVVHPTLWCRLPCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRL 451
+SVV +L R+ C +SV++ +L R+L +SVV +L R+
Sbjct: 232 WFSVVEGSLLWRVLCCGWFSVMEGSLLWRVLSCGWFSVVDGSLLWRV 278
Score = 40.3 bits (90), Expect = 0.004
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +2
Query: 65 SAVMGIVKCDSFYVGSRCVQTTLWCRLLCGADYSVVQATLWCRLLCGADYSVVQ-TTLWC 241
S V G+ +S GS + ++ L CG + V + LW L CG +SVV + LW
Sbjct: 279 SVVEGLCCGESVVDGSLLWRVSVVEGLCCGWFFVVGGSLLWMVLCCGW-FSVVNGSLLWM 337
Query: 242 RLLCGADYSVVHAT-LWCRLLCG 307
L CG +SVV + LW L CG
Sbjct: 338 GLCCGG-FSVVDGSLLWMGLCCG 359
Score = 37.9 bits (84), Expect = 0.022
Identities = 38/111 (34%), Positives = 52/111 (46%), Gaps = 17/111 (15%)
Frame = +3
Query: 216 LWCRLLCGADYSVVQ------TTLWCMLLCGADYSVVQTTLWCILLCGADYPVVQTTLWC 377
LW L CG +SV++ + LW +L CG V + LW +L CG + VV+ +L
Sbjct: 10 LWMVLCCGW-FSVIEGLCCGGSLLWMVLCCGWVSVVGGSLLWRVLCCGG-FSVVEGSLLW 67
Query: 378 RLLCGAD-----YSVVQ------TTLWCRLLCGADYSVVQTTLWCRHVSVV 497
R+ G SVV+ + LW L CG V + LW VSVV
Sbjct: 68 RVSVGDGSLLWRLSVVEVLCCGGSLLWMVLCCGGFCVVEGSLLW--RVSVV 116
Score = 37.9 bits (84), Expect = 0.022
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +2
Query: 80 IVKCDSFYV--GSRCVQTTLWCRLLCGADYSVVQATLWCRLLCGADYSVVQTTLWCRLLC 253
++ C F V G C + LW L CG SVV +L R+LC +SVV+ +L R+
Sbjct: 13 VLCCGWFSVIEGLCCGGSLLWMVLCCGW-VSVVGGSLLWRVLCCGGFSVVEGSLLWRVSV 71
Query: 254 GADYSVVHATLWCRLLCGADYSVVHPTLWCRLPCGADYSVVQTTLW 391
G + ++ L CG LW L CG V + LW
Sbjct: 72 GDGSLLWRLSVVEVLCCGGS------LLWMVLCCGGFCVVEGSLLW 111
>AK126616-1|BAC86614.1| 309|Homo sapiens protein ( Homo sapiens
cDNA FLJ44654 fis, clone BRACE2047232. ).
Length = 309
Score = 39.1 bits (87), Expect = 0.009
Identities = 29/106 (27%), Positives = 46/106 (43%)
Frame = +3
Query: 126 LLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCMLLCGADYSV 305
L CG V ++ L CG V +++ L CG V ++ ML CG
Sbjct: 58 LKCGPSIPSVFPSVLRMLRCGPSSPSVFSSVLGMLRCGPSSPSVFPSVLRMLRCGPSLPS 117
Query: 306 VQTTLWCILLCGADYPVVQTTLWCRLLCGADYSVVQTTLWCRLLCG 443
V +++ +L CG P V +++ L CG V +++ L CG
Sbjct: 118 VFSSVLGMLSCGPSIPSVFSSVLRMLRCGPSIPSVFSSVLRMLRCG 163
Score = 38.7 bits (86), Expect = 0.012
Identities = 31/118 (26%), Positives = 48/118 (40%)
Frame = +2
Query: 143 LLCGADYSVVQATLWCRLLCGADYSVVQTTLWCRLLCGADYSVVHATLWCRLLCGADYSV 322
L CG V +++ L CG V ++ L CG V +++ L CG
Sbjct: 41 LRCGPSSPSVFSSVLGMLKCGPSIPSVFPSVLRMLRCGPSSPSVFSSVLGMLRCGPSSPS 100
Query: 323 VHPTLWCRLPCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTCVCR 496
V P++ L CG V +++ L CG V +++ L CG V + V R
Sbjct: 101 VFPSVLRMLRCGPSLPSVFSSVLGMLSCGPSIPSVFSSVLRMLRCGPSIPSVFSSVLR 158
Score = 38.7 bits (86), Expect = 0.012
Identities = 29/106 (27%), Positives = 46/106 (43%)
Frame = +3
Query: 126 LLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCMLLCGADYSV 305
L CG V +++ L CG V ++ L CG V +++ ML CG
Sbjct: 41 LRCGPSSPSVFSSVLGMLKCGPSIPSVFPSVLRMLRCGPSSPSVFSSVLGMLRCGPSSPS 100
Query: 306 VQTTLWCILLCGADYPVVQTTLWCRLLCGADYSVVQTTLWCRLLCG 443
V ++ +L CG P V +++ L CG V +++ L CG
Sbjct: 101 VFPSVLRMLRCGPSLPSVFSSVLGMLSCGPSIPSVFSSVLRMLRCG 146
Score = 37.5 bits (83), Expect = 0.029
Identities = 29/106 (27%), Positives = 45/106 (42%)
Frame = +3
Query: 126 LLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCMLLCGADYSV 305
L CG V ++ L CG V +++ L CG V ++ ML CG
Sbjct: 24 LRCGPSTPSVFPSVLRMLRCGPSSPSVFSSVLGMLKCGPSIPSVFPSVLRMLRCGPSSPS 83
Query: 306 VQTTLWCILLCGADYPVVQTTLWCRLLCGADYSVVQTTLWCRLLCG 443
V +++ +L CG P V ++ L CG V +++ L CG
Sbjct: 84 VFSSVLGMLRCGPSSPSVFPSVLRMLRCGPSLPSVFSSVLGMLSCG 129
Score = 36.7 bits (81), Expect = 0.050
Identities = 29/106 (27%), Positives = 44/106 (41%)
Frame = +3
Query: 126 LLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCMLLCGADYSV 305
L CG V ++ L CG V ++ L CG V +++ ML CG
Sbjct: 7 LRCGPSIPSVFPSVLGSLRCGPSTPSVFPSVLRMLRCGPSSPSVFSSVLGMLKCGPSIPS 66
Query: 306 VQTTLWCILLCGADYPVVQTTLWCRLLCGADYSVVQTTLWCRLLCG 443
V ++ +L CG P V +++ L CG V ++ L CG
Sbjct: 67 VFPSVLRMLRCGPSSPSVFSSVLGMLRCGPSSPSVFPSVLRMLRCG 112
Score = 35.1 bits (77), Expect = 0.15
Identities = 28/106 (26%), Positives = 42/106 (39%)
Frame = +2
Query: 143 LLCGADYSVVQATLWCRLLCGADYSVVQTTLWCRLLCGADYSVVHATLWCRLLCGADYSV 322
L CG V ++ L CG V ++ L CG V +++ L CG
Sbjct: 7 LRCGPSIPSVFPSVLGSLRCGPSTPSVFPSVLRMLRCGPSSPSVFSSVLGMLKCGPSIPS 66
Query: 323 VHPTLWCRLPCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCG 460
V P++ L CG V +++ L CG V ++ L CG
Sbjct: 67 VFPSVLRMLRCGPSSPSVFSSVLGMLRCGPSSPSVFPSVLRMLRCG 112
Score = 33.9 bits (74), Expect = 0.35
Identities = 27/106 (25%), Positives = 42/106 (39%)
Frame = +2
Query: 143 LLCGADYSVVQATLWCRLLCGADYSVVQTTLWCRLLCGADYSVVHATLWCRLLCGADYSV 322
L CG V ++ L CG V +++ L CG V ++ L CG
Sbjct: 58 LKCGPSIPSVFPSVLRMLRCGPSSPSVFSSVLGMLRCGPSSPSVFPSVLRMLRCGPSLPS 117
Query: 323 VHPTLWCRLPCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCG 460
V ++ L CG V +++ L CG V +++ L CG
Sbjct: 118 VFSSVLGMLSCGPSIPSVFSSVLRMLRCGPSIPSVFSSVLRMLRCG 163
Score = 33.9 bits (74), Expect = 0.35
Identities = 28/106 (26%), Positives = 44/106 (41%)
Frame = +1
Query: 160 LLCGAGYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGACYSVVQTTLWCRLLCGASYSV 339
L CG V ++ L CG V +++ L CG V ++ L CG S
Sbjct: 58 LKCGPSIPSVFPSVLRMLRCGPSSPSVFSSVLGMLRCGPSSPSVFPSVLRMLRCGPSLPS 117
Query: 340 VQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCG 477
V +++ L CG V +++ L CG V +++ L CG
Sbjct: 118 VFSSVLGMLSCGPSIPSVFSSVLRMLRCGPSIPSVFSSVLRMLRCG 163
Score = 33.5 bits (73), Expect = 0.46
Identities = 30/118 (25%), Positives = 45/118 (38%)
Frame = +2
Query: 143 LLCGADYSVVQATLWCRLLCGADYSVVQTTLWCRLLCGADYSVVHATLWCRLLCGADYSV 322
L CG V ++ L CG V +++ L CG V ++ L CG
Sbjct: 24 LRCGPSTPSVFPSVLRMLRCGPSSPSVFSSVLGMLKCGPSIPSVFPSVLRMLRCGPSSPS 83
Query: 323 VHPTLWCRLPCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTCVCR 496
V ++ L CG V ++ L CG V +++ L CG V + V R
Sbjct: 84 VFSSVLGMLRCGPSSPSVFPSVLRMLRCGPSLPSVFSSVLGMLSCGPSIPSVFSSVLR 141
Score = 31.9 bits (69), Expect = 1.4
Identities = 28/109 (25%), Positives = 43/109 (39%)
Frame = +1
Query: 160 LLCGAGYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGACYSVVQTTLWCRLLCGASYSV 339
L CG V ++ L CG V ++ L CG V +++ L CG S
Sbjct: 7 LRCGPSIPSVFPSVLGSLRCGPSTPSVFPSVLRMLRCGPSSPSVFSSVLGMLKCGPSIPS 66
Query: 340 VQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADM 486
V ++ L CG V +++ L CG V ++ L CG +
Sbjct: 67 VFPSVLRMLRCGPSSPSVFSSVLGMLRCGPSSPSVFPSVLRMLRCGPSL 115
Score = 31.9 bits (69), Expect = 1.4
Identities = 22/78 (28%), Positives = 34/78 (43%)
Frame = +3
Query: 126 LLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTTLWCMLLCGADYSV 305
L CG V ++ L CG V +++ L CG V +++ ML CG
Sbjct: 92 LRCGPSSPSVFPSVLRMLRCGPSLPSVFSSVLGMLSCGPSIPSVFSSVLRMLRCGPSIPS 151
Query: 306 VQTTLWCILLCGADYPVV 359
V +++ +L CG P V
Sbjct: 152 VFSSVLRMLRCGPSIPSV 169
Score = 29.1 bits (62), Expect = 10.0
Identities = 26/101 (25%), Positives = 37/101 (36%)
Frame = +2
Query: 194 LLCGADYSVVQTTLWCRLLCGADYSVVHATLWCRLLCGADYSVVHPTLWCRLPCGADYSV 373
L CG V ++ L CG V ++ L CG V ++ L CG
Sbjct: 7 LRCGPSIPSVFPSVLGSLRCGPSTPSVFPSVLRMLRCGPSSPSVFSSVLGMLKCGPSIPS 66
Query: 374 VQTTLWCRLLCGADYSVVQTTLWCRLLCGADYSVVQTCVCR 496
V ++ L CG V +++ L CG V V R
Sbjct: 67 VFPSVLRMLRCGPSSPSVFSSVLGMLRCGPSSPSVFPSVLR 107
>AK022609-1|BAB14128.1| 307|Homo sapiens protein ( Homo sapiens
cDNA FLJ12547 fis, clone NT2RM4000634. ).
Length = 307
Score = 32.7 bits (71), Expect = 0.81
Identities = 36/142 (25%), Positives = 54/142 (38%), Gaps = 13/142 (9%)
Frame = +2
Query: 107 GSRCVQTTLWCRLLCGADYSVVQATLWCRLLCGADYSVVQTTLW-----CRLLCGADYSV 271
G CV T C C + V A++ C +CG + V+ + C +CG +
Sbjct: 53 GCLCVWGTFVCVCACVWVHICVCASV-CVPVCGGAHLCVRLCVGVHICVCACVCGCTFVC 111
Query: 272 VHATLW-CRLLCGADYSVVHPTLWCRLPCGADYSVVQTTLWCRLLCGADYSVVQTTLW-- 442
V A + C +CGA V C C + V + C + G + V +W
Sbjct: 112 VCACVCGCLCVCGAHLCV------CVCLCVGAHLCVCLCV-CACVWGCTFVCVCACVWGC 164
Query: 443 -----CRLLCGADYSVVQTCVC 493
C +CG + V CVC
Sbjct: 165 TFVCVCACVCGCTFVCVCACVC 186
Score = 30.3 bits (65), Expect = 4.3
Identities = 30/108 (27%), Positives = 43/108 (39%), Gaps = 6/108 (5%)
Frame = +2
Query: 188 CRLLC-GADYSVVQTTLWCRLLCGADYSVVHATLWCRLLCGADYSVVHPTLWCRLPCGAD 364
C +C GA V C LCG + V A + C +CG V T C C
Sbjct: 14 CVPVCVGAHLCVWVHICVCVRLCGCTFVCVCACV-CACVCGC--LCVWGTFVCVCACVWV 70
Query: 365 YSVVQTTLWCRLLCGADYSVVQTTLW-----CRLLCGADYSVVQTCVC 493
+ V ++ C +CG + V+ + C +CG + V CVC
Sbjct: 71 HICVCASV-CVPVCGGAHLCVRLCVGVHICVCACVCGCTFVCVCACVC 117
>AY273815-1|AAQ16156.1| 2623|Homo sapiens bone specific CMF608
protein.
Length = 2623
Score = 30.3 bits (65), Expect = 4.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 243 DYSVVQTTLWCMLLCGADYSVVQTTLWCILLCGADYPVV 359
DY V+ T+ L+C DY +Q +W IL +D P++
Sbjct: 350 DYIVLNTSFSTFLVCNIDYGHIQ-PVWQILALYSDSPLI 387
>BC014176-1|AAH14176.1| 640|Homo sapiens ubiquitin specific
peptidase 49 protein.
Length = 640
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 293 RLLCGADYSVVHPTLWCRLPCGADYSVVQTTLWCRLLCG 409
RL D+S+++P WC L C SV + CG
Sbjct: 9 RLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACG 47
>AL365205-13|CAI13188.1| 640|Homo sapiens ubiquitin specific
peptidase 49 protein.
Length = 640
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 293 RLLCGADYSVVHPTLWCRLPCGADYSVVQTTLWCRLLCG 409
RL D+S+++P WC L C SV + CG
Sbjct: 9 RLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACG 47
>AL365205-12|CAI13186.1| 585|Homo sapiens ubiquitin specific
peptidase 49 protein.
Length = 585
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 293 RLLCGADYSVVHPTLWCRLPCGADYSVVQTTLWCRLLCG 409
RL D+S+++P WC L C SV + CG
Sbjct: 9 RLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACG 47
>AL365205-11|CAI13187.1| 688|Homo sapiens ubiquitin specific
peptidase 49 protein.
Length = 688
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 293 RLLCGADYSVVHPTLWCRLPCGADYSVVQTTLWCRLLCG 409
RL D+S+++P WC L C SV + CG
Sbjct: 9 RLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACG 47
>AK074528-1|BAC11041.1| 145|Homo sapiens protein ( Homo sapiens
cDNA FLJ90047 fis, clone HEMBA1002316. ).
Length = 145
Score = 29.9 bits (64), Expect = 5.7
Identities = 33/106 (31%), Positives = 41/106 (38%), Gaps = 10/106 (9%)
Frame = -2
Query: 363 SAPQGSLH-HR--VGCTTE*SAPQSSLHHRVACT----TE*SAPQSSLHHRV-VCTTE*S 208
SAP LH H + TT P LHHR++ AP L+ + T+ S
Sbjct: 5 SAPSSCLHWHHCPIYTTTRLYNPPICLHHRLSSVYTILLSTPAPLPYLYPPIYTITSPVS 64
Query: 207 APQSS--LHHRVACTTE*SAPQSSLHHRVVCTHRLPT*NESHFTIP 76
P S HH T S P +LH R RL T H +P
Sbjct: 65 TPSSHPHQHHHPTYTIPPSTPLPNLHRRPHSHPRLHTHTRPHHHLP 110
>AJ586139-1|CAE51939.1| 688|Homo sapiens ubiquitin-specific
proteinase 49 protein.
Length = 688
Score = 29.9 bits (64), Expect = 5.7
Identities = 13/39 (33%), Positives = 18/39 (46%)
Frame = +2
Query: 293 RLLCGADYSVVHPTLWCRLPCGADYSVVQTTLWCRLLCG 409
RL D+S+++P WC L C SV + CG
Sbjct: 9 RLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACG 47
>X83961-1|CAA58791.1| 380|Homo sapiens transmembrane protein
protein.
Length = 380
Score = 29.1 bits (62), Expect = 10.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 34 HVPSNEKSIKECCNGDCEMRFILRRQSMRAD 126
H+P E C +G CE ++LRR S R +
Sbjct: 272 HMPCPENLNGYCIHGKCEFIYLLRRASCRCE 302
>U19878-1|AAA64622.1| 380|Homo sapiens transmembrane protein
protein.
Length = 380
Score = 29.1 bits (62), Expect = 10.0
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 34 HVPSNEKSIKECCNGDCEMRFILRRQSMRAD 126
H+P E C +G CE ++LRR S R +
Sbjct: 272 HMPCPENLNGYCIHGKCEFIYLLRRASCRCE 302
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,779,633
Number of Sequences: 237096
Number of extensions: 2223482
Number of successful extensions: 4462
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2093
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3993
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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