Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N23
(588 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15796-1|AAA35736.1| 261|Homo sapiens protein ( Human cyclin pr... 255 7e-68
J04718-1|AAA60040.1| 261|Homo sapiens PCNA protein. 255 7e-68
BC062439-1|AAH62439.1| 261|Homo sapiens proliferating cell nucl... 255 7e-68
BC000491-1|AAH00491.1| 261|Homo sapiens proliferating cell nucl... 255 7e-68
AL121924-4|CAC27344.1| 261|Homo sapiens proliferating cell nucl... 255 7e-68
AF527838-1|AAM78556.1| 261|Homo sapiens proliferating cell nucl... 255 7e-68
CR541799-1|CAG46598.1| 261|Homo sapiens PCNA protein. 254 2e-67
CR536501-1|CAG38740.1| 261|Homo sapiens PCNA protein. 252 7e-67
AY310163-1|AAP58730.1| 73|Homo sapiens proliferating cell nucl... 107 4e-23
AY310164-1|AAP58731.1| 73|Homo sapiens proliferating cell nucl... 106 5e-23
AY310162-1|AAP58729.1| 73|Homo sapiens proliferating cell nucl... 105 9e-23
AY882585-1|AAW78659.1| 3080|Homo sapiens G protein-coupled recep... 30 7.0
AY255581-1|AAO85093.1| 1271|Homo sapiens G protein-coupled recep... 30 7.0
AY140954-1|AAN46668.1| 2799|Homo sapiens G-protein coupled recep... 30 7.0
AL161778-2|CAI40998.2| 2875|Homo sapiens G protein-coupled recep... 30 7.0
AL161778-1|CAM21249.1| 3080|Homo sapiens G protein-coupled recep... 30 7.0
AL136167-2|CAM28220.1| 2875|Homo sapiens G protein-coupled recep... 30 7.0
AL136167-1|CAM28221.1| 3080|Homo sapiens G protein-coupled recep... 30 7.0
AL078638-16|CAM21579.1| 2875|Homo sapiens G protein-coupled rece... 30 7.0
AL078638-15|CAM21580.1| 3080|Homo sapiens G protein-coupled rece... 30 7.0
>M15796-1|AAA35736.1| 261|Homo sapiens protein ( Human cyclin
protein gene, complete cds. ).
Length = 261
Score = 255 bits (625), Expect = 7e-68
Identities = 113/166 (68%), Positives = 145/166 (87%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEKVSDYEMKLMN 449
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNADT+ FE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 450 LDLEHLGIPETEYSCTIRLPSVEFARICRDLSQFGESMVISCTKEG 587
LD+E LGIPE EYSC +++PS EFARICRDLS G+++VISC K+G
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDG 166
>J04718-1|AAA60040.1| 261|Homo sapiens PCNA protein.
Length = 261
Score = 255 bits (625), Expect = 7e-68
Identities = 113/166 (68%), Positives = 145/166 (87%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEKVSDYEMKLMN 449
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNADT+ FE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 450 LDLEHLGIPETEYSCTIRLPSVEFARICRDLSQFGESMVISCTKEG 587
LD+E LGIPE EYSC +++PS EFARICRDLS G+++VISC K+G
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDG 166
>BC062439-1|AAH62439.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 255 bits (625), Expect = 7e-68
Identities = 113/166 (68%), Positives = 145/166 (87%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEKVSDYEMKLMN 449
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNADT+ FE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 450 LDLEHLGIPETEYSCTIRLPSVEFARICRDLSQFGESMVISCTKEG 587
LD+E LGIPE EYSC +++PS EFARICRDLS G+++VISC K+G
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDG 166
>BC000491-1|AAH00491.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 255 bits (625), Expect = 7e-68
Identities = 113/166 (68%), Positives = 145/166 (87%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEKVSDYEMKLMN 449
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNADT+ FE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 450 LDLEHLGIPETEYSCTIRLPSVEFARICRDLSQFGESMVISCTKEG 587
LD+E LGIPE EYSC +++PS EFARICRDLS G+++VISC K+G
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDG 166
>AL121924-4|CAC27344.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 255 bits (625), Expect = 7e-68
Identities = 113/166 (68%), Positives = 145/166 (87%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEKVSDYEMKLMN 449
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNADT+ FE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 450 LDLEHLGIPETEYSCTIRLPSVEFARICRDLSQFGESMVISCTKEG 587
LD+E LGIPE EYSC +++PS EFARICRDLS G+++VISC K+G
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDG 166
>AF527838-1|AAM78556.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 255 bits (625), Expect = 7e-68
Identities = 113/166 (68%), Positives = 145/166 (87%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEKVSDYEMKLMN 449
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNADT+ FE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 450 LDLEHLGIPETEYSCTIRLPSVEFARICRDLSQFGESMVISCTKEG 587
LD+E LGIPE EYSC +++PS EFARICRDLS G+++VISC K+G
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDG 166
>CR541799-1|CAG46598.1| 261|Homo sapiens PCNA protein.
Length = 261
Score = 254 bits (621), Expect = 2e-67
Identities = 112/166 (67%), Positives = 144/166 (86%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFE RL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEGRLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEKVSDYEMKLMN 449
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNADT+ FE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 450 LDLEHLGIPETEYSCTIRLPSVEFARICRDLSQFGESMVISCTKEG 587
LD+E LGIPE EYSC +++PS EFARICRDLS G+++VISC K+G
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDG 166
>CR536501-1|CAG38740.1| 261|Homo sapiens PCNA protein.
Length = 261
Score = 252 bits (617), Expect = 7e-67
Identities = 112/166 (67%), Positives = 144/166 (86%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFAFESPNQEKVSDYEMKLMN 449
RCDRN++MG+NL SMSKILKCAG++D +T++A+DNADT+ FE+PNQEKVSDYEMKLM+
Sbjct: 61 RCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMD 120
Query: 450 LDLEHLGIPETEYSCTIRLPSVEFARICRDLSQFGESMVISCTKEG 587
LD+E LGIPE EYSC +++PS EFA ICRDLS G+++VISC K+G
Sbjct: 121 LDVEQLGIPEQEYSCVVKMPSGEFACICRDLSHIGDAVVISCAKDG 166
>AY310163-1|AAP58730.1| 73|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 73
Score = 107 bits (256), Expect = 4e-23
Identities = 48/72 (66%), Positives = 62/72 (86%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNL 305
RCDRN +MG+NL
Sbjct: 61 RCDRNPAMGVNL 72
>AY310164-1|AAP58731.1| 73|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 73
Score = 106 bits (255), Expect = 5e-23
Identities = 47/72 (65%), Positives = 62/72 (86%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KD + +A +D +G+ LQ+MD+SHVSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDRINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNL 305
RCDRN++MG+NL
Sbjct: 61 RCDRNLAMGVNL 72
>AY310162-1|AAP58729.1| 73|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 73
Score = 105 bits (253), Expect = 9e-23
Identities = 47/72 (65%), Positives = 62/72 (86%)
Frame = +3
Query: 90 MFEARLLRSSILKKVLEAIKDLLTQATFDCDDNGIQLQAMDNSHVSLVSLTLRADGFDKY 269
MFEARL++ SILKKVLEA+KDL+ +A +D +G+ LQ+MD+S VSLV LTLR++GFD Y
Sbjct: 1 MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSQVSLVQLTLRSEGFDTY 60
Query: 270 RCDRNISMGMNL 305
RCDRN++MG+NL
Sbjct: 61 RCDRNLAMGVNL 72
>AY882585-1|AAW78659.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +3
Query: 216 SHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFA 395
SH+S LT + + +++ ++ + DKD +T+ T+
Sbjct: 1216 SHISANKLTTSVNSHISSSATYRVHTPVSIQLVTSTSVLSSDKDQMTISLGKTPRTMEVT 1275
Query: 396 FESPNQEKVSDYEMKLMNLDLEHLGIPET 482
SP++ Y +L++ G PET
Sbjct: 1276 EMSPSKNSFISYSRGTPSLEMTDTGFPET 1304
>AY255581-1|AAO85093.1| 1271|Homo sapiens G protein-coupled receptor
GPR112 protein.
Length = 1271
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +3
Query: 216 SHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFA 395
SH+S LT + + +++ ++ + DKD +T+ T+
Sbjct: 874 SHISANKLTTSVNSHISSSATYRVHTPVSIQLVTSTSVLSSDKDQMTISLGKTPRTMEVT 933
Query: 396 FESPNQEKVSDYEMKLMNLDLEHLGIPET 482
SP++ Y +L++ G PET
Sbjct: 934 EMSPSKNSFISYSRGTPSLEMTDTGFPET 962
>AY140954-1|AAN46668.1| 2799|Homo sapiens G-protein coupled receptor
GPR112 protein.
Length = 2799
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +3
Query: 216 SHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFA 395
SH+S LT + + +++ ++ + DKD +T+ T+
Sbjct: 1152 SHISANKLTTSVNSHISSSATYRVHTPVSIQLVTSTSVLSSDKDQMTISLGKTPRTMEVT 1211
Query: 396 FESPNQEKVSDYEMKLMNLDLEHLGIPET 482
SP++ Y +L++ G PET
Sbjct: 1212 EMSPSKNSFISYSRGTPSLEMTDTGFPET 1240
>AL161778-2|CAI40998.2| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +3
Query: 216 SHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFA 395
SH+S LT + + +++ ++ + DKD +T+ T+
Sbjct: 1011 SHISANKLTTSVNSHISSSATYRVHTPVSIQLVTSTSVLSSDKDQMTISLGKTPRTMEVT 1070
Query: 396 FESPNQEKVSDYEMKLMNLDLEHLGIPET 482
SP++ Y +L++ G PET
Sbjct: 1071 EMSPSKNSFISYSRGTPSLEMTDTGFPET 1099
>AL161778-1|CAM21249.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +3
Query: 216 SHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFA 395
SH+S LT + + +++ ++ + DKD +T+ T+
Sbjct: 1216 SHISANKLTTSVNSHISSSATYRVHTPVSIQLVTSTSVLSSDKDQMTISLGKTPRTMEVT 1275
Query: 396 FESPNQEKVSDYEMKLMNLDLEHLGIPET 482
SP++ Y +L++ G PET
Sbjct: 1276 EMSPSKNSFISYSRGTPSLEMTDTGFPET 1304
>AL136167-2|CAM28220.1| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +3
Query: 216 SHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFA 395
SH+S LT + + +++ ++ + DKD +T+ T+
Sbjct: 1011 SHISANKLTTSVNSHISSSATYRVHTPVSIQLVTSTSVLSSDKDQMTISLGKTPRTMEVT 1070
Query: 396 FESPNQEKVSDYEMKLMNLDLEHLGIPET 482
SP++ Y +L++ G PET
Sbjct: 1071 EMSPSKNSFISYSRGTPSLEMTDTGFPET 1099
>AL136167-1|CAM28221.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +3
Query: 216 SHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFA 395
SH+S LT + + +++ ++ + DKD +T+ T+
Sbjct: 1216 SHISANKLTTSVNSHISSSATYRVHTPVSIQLVTSTSVLSSDKDQMTISLGKTPRTMEVT 1275
Query: 396 FESPNQEKVSDYEMKLMNLDLEHLGIPET 482
SP++ Y +L++ G PET
Sbjct: 1276 EMSPSKNSFISYSRGTPSLEMTDTGFPET 1304
>AL078638-16|CAM21579.1| 2875|Homo sapiens G protein-coupled receptor
112 protein.
Length = 2875
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +3
Query: 216 SHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFA 395
SH+S LT + + +++ ++ + DKD +T+ T+
Sbjct: 1011 SHISANKLTTSVNSHISSSATYRVHTPVSIQLVTSTSVLSSDKDQMTISLGKTPRTMEVT 1070
Query: 396 FESPNQEKVSDYEMKLMNLDLEHLGIPET 482
SP++ Y +L++ G PET
Sbjct: 1071 EMSPSKNSFISYSRGTPSLEMTDTGFPET 1099
>AL078638-15|CAM21580.1| 3080|Homo sapiens G protein-coupled receptor
112 protein.
Length = 3080
Score = 29.9 bits (64), Expect = 7.0
Identities = 18/89 (20%), Positives = 35/89 (39%)
Frame = +3
Query: 216 SHVSLVSLTLRADGFDKYRCDRNISMGMNLGSMSKILKCAGDKDTVTMKAQDNADTVTFA 395
SH+S LT + + +++ ++ + DKD +T+ T+
Sbjct: 1216 SHISANKLTTSVNSHISSSATYRVHTPVSIQLVTSTSVLSSDKDQMTISLGKTPRTMEVT 1275
Query: 396 FESPNQEKVSDYEMKLMNLDLEHLGIPET 482
SP++ Y +L++ G PET
Sbjct: 1276 EMSPSKNSFISYSRGTPSLEMTDTGFPET 1304
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,735,801
Number of Sequences: 237096
Number of extensions: 1525218
Number of successful extensions: 2129
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 2085
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2129
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6155099854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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