Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N16
(551 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical... 83 1e-16
AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain pro... 40 0.002
AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain pro... 40 0.002
U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone methyl... 35 0.045
U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone methyl... 35 0.045
AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical ... 35 0.045
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 33 0.18
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 33 0.18
AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical ... 31 0.42
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.55
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 31 0.55
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 31 0.55
U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical pr... 31 0.73
U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical pr... 31 0.73
U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical pr... 30 1.3
U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical pr... 29 2.9
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 29 2.9
Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical pr... 28 3.9
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 27 6.8
>AC024746-15|AAF60409.1| 168|Caenorhabditis elegans Hypothetical
protein Y110A2AL.13 protein.
Length = 168
Score = 83.4 bits (197), Expect = 1e-16
Identities = 50/123 (40%), Positives = 65/123 (52%), Gaps = 10/123 (8%)
Frame = +2
Query: 212 EDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKEVQCSHILVK 391
++SLP GW+ R+SRS YY N T +SQWE+P A S K VQC H+LVK
Sbjct: 3 DNSLPAGWEKRQSRSNDRVYYFNTATGRSQWERPDESAF----GKGSELKSVQCLHLLVK 58
Query: 392 HKXXXXXXXXXXXXITRTKEEAIQIIKG-------YRTEI---VNREVGFDEVARLYSDC 541
H ITR+K++AI I+K Y E+ N E F E+A+ +SDC
Sbjct: 59 HDGSRNPSSWRSDHITRSKDDAINILKSADLRNFHYEKELKDASNIEGKFRELAKQFSDC 118
Query: 542 SSA 550
SSA
Sbjct: 119 SSA 121
>AC024847-5|AAN73850.1| 792|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform b
protein.
Length = 792
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 200 AAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGS 319
AA E+ LP+GW+ R + G YY++ TK + WE+P +
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERPST 252
Score = 38.7 bits (86), Expect = 0.003
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 221 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 313
LPEGW+ R+ +T Y++N + +QWE P
Sbjct: 326 LPEGWEKRQDPNTSRMYFVNHVNRTTQWEDP 356
Score = 32.7 bits (71), Expect = 0.18
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 221 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 313
LP+GW+ R+ G YY++ T+ + W++P
Sbjct: 255 LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>AC024847-4|AAN73849.1| 794|Caenorhabditis elegans Ww domain
protein (e3 ubiquitinligase) protein 1, isoform a
protein.
Length = 794
Score = 39.5 bits (88), Expect = 0.002
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +2
Query: 200 AAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGS 319
AA E+ LP+GW+ R + G YY++ TK + WE+P +
Sbjct: 214 AAGAEEQLPDGWEMRFDQY-GRKYYVDHTTKSTTWERPST 252
Score = 39.1 bits (87), Expect = 0.002
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 221 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNEDE 343
LPEGW+ R+ +T Y++N + +QWE P + D+
Sbjct: 326 LPEGWEKRQDPNTSRMYFVNHVNRTTQWEDPRTQGFRGSDQ 366
Score = 32.7 bits (71), Expect = 0.18
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +2
Query: 221 LPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 313
LP+GW+ R+ G YY++ T+ + W++P
Sbjct: 255 LPQGWEMRRD-PRGRVYYVDHNTRTTTWQRP 284
>U80437-14|ABO52817.1| 1590|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform b protein.
Length = 1590
Score = 34.7 bits (76), Expect = 0.045
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 185 RKSEMAAAQEDSLPEG---WQARKSRSTGMTYYLNKYTKQSQWEKP 313
R +E A ++++L + W KS + G TYY NK TK++QW P
Sbjct: 1333 RANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1377
>U80437-13|ABO52816.1| 1604|Caenorhabditis elegans Histone
methyltransferase-likeprotein 1, isoform a protein.
Length = 1604
Score = 34.7 bits (76), Expect = 0.045
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +2
Query: 185 RKSEMAAAQEDSLPEG---WQARKSRSTGMTYYLNKYTKQSQWEKP 313
R +E A ++++L + W KS + G TYY NK TK++QW P
Sbjct: 1347 RANEEEAKRQEALAKTKYVWAIAKSEA-GETYYYNKITKETQWTAP 1391
>AL034392-2|CAA22305.1| 120|Caenorhabditis elegans Hypothetical
protein Y40B1A.2 protein.
Length = 120
Score = 34.7 bits (76), Expect = 0.045
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +2
Query: 230 GWQARKSRSTGMTYYLNKYTKQSQWEKP 313
GW + S S+G YY NK T+ SQW+KP
Sbjct: 10 GWTEQMS-SSGKMYYYNKKTEISQWDKP 36
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2
Query: 332 NEDEDNSSSKEVQCSHILVKHKXXXXXXXXXXXXITRTKEEAIQIIKGYRTEIVNREVGF 511
+E E KE + + H+ T+ KEEA++I K ++I + E+
Sbjct: 1583 SEIEKRIQEKEEEFENTRRNHQRALESMQATLEAETKQKEEALRIKKKLESDINDLEIAL 1642
Query: 512 DEVARLYSD 538
D R Y+D
Sbjct: 1643 DHANRAYAD 1651
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 32.7 bits (71), Expect = 0.18
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +2
Query: 332 NEDEDNSSSKEVQCSHILVKHKXXXXXXXXXXXXITRTKEEAIQIIKGYRTEIVNREVGF 511
+E E KE + + H+ T+ KEEA++I K ++I + E+
Sbjct: 1583 SEIEKRIQEKEEEFENTRRNHQRALESMQATLEAETKQKEEALRIKKKLESDINDLEIAL 1642
Query: 512 DEVARLYSD 538
D R Y+D
Sbjct: 1643 DHANRAYAD 1651
>AC084161-4|AAK29730.3| 724|Caenorhabditis elegans Hypothetical
protein Y92H12A.2 protein.
Length = 724
Score = 31.5 bits (68), Expect = 0.42
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 176 NDPRKSEMAAAQEDS-LPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNED 340
N P S Q S +P+GW+ R+ G T Y+N + +Q+ P S + N D
Sbjct: 153 NSPSDSTADLQQTSSGMPQGWEERED-GNGRTVYVNHALRTTQFTPPESVSNGNVD 207
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 191 SEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 313
SE Q +LP WQ S+S + YY+ + ++++QWE P
Sbjct: 3041 SEHFLNQSVTLP--WQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical protein
F15D3.1a protein.
Length = 3674
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 191 SEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 313
SE Q +LP WQ S+S + YY+ + ++++QWE P
Sbjct: 3041 SEHFLNQSVTLP--WQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 31.1 bits (67), Expect = 0.55
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 191 SEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 313
SE Q +LP WQ S+S + YY+ + ++++QWE P
Sbjct: 3041 SEHFLNQSVTLP--WQRAISKSNLLPYYIEQTSEKTQWEHP 3079
>U58758-4|AAK68614.1| 914|Caenorhabditis elegans Hypothetical
protein ZK1127.9a protein.
Length = 914
Score = 30.7 bits (66), Expect = 0.73
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 185 RKSEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKE 364
R+ M Q P+ + G YY N T+++ WEKP A ++++ +S E
Sbjct: 218 REERMPHGQIPQNPDDAWNEFNAPDGRKYYFNSITQENTWEKP--KALIDQENGGGASPE 275
>U58758-3|AAK68615.1| 905|Caenorhabditis elegans Hypothetical
protein ZK1127.9b protein.
Length = 905
Score = 30.7 bits (66), Expect = 0.73
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +2
Query: 185 RKSEMAAAQEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKE 364
R+ M Q P+ + G YY N T+++ WEKP A ++++ +S E
Sbjct: 209 REERMPHGQIPQNPDDAWNEFNAPDGRKYYFNSITQENTWEKP--KALIDQENGGGASPE 266
>U58758-6|AAO38577.1| 604|Caenorhabditis elegans Hypothetical
protein ZK1127.9e protein.
Length = 604
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 GMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKE 364
G YY N T+++ WEKP A ++++ +S E
Sbjct: 22 GRKYYFNSITQENTWEKP--KALIDQENGGGASPE 54
>U58758-5|AAL11107.1| 693|Caenorhabditis elegans Hypothetical
protein ZK1127.9c protein.
Length = 693
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 260 GMTYYLNKYTKQSQWEKPGSPAAVNEDEDNSSSKE 364
G YY N T+++ WEKP A ++++ +S E
Sbjct: 22 GRKYYFNSITQENTWEKP--KALIDQENGGGASPE 54
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 52 KDFQIIDYYRALRKPIGSIRGVHSSFFSSKE 144
KDF+ + R L+K IG IR ++ F SKE
Sbjct: 409 KDFEKYETARRLKKKIGGIRERYTDDFKSKE 439
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 52 KDFQIIDYYRALRKPIGSIRGVHSSFFSSKE 144
KDF+ + R L+K IG IR ++ F SKE
Sbjct: 481 KDFEKYETARRLKKKIGGIRERYTDDFKSKE 511
>Z22176-1|CAA80142.1| 724|Caenorhabditis elegans Hypothetical
protein ZK1098.1 protein.
Length = 724
Score = 28.7 bits (61), Expect = 2.9
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 218 SLPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 313
S+ W + G YY N+ TKQ+ W KP
Sbjct: 79 SVESDWSVHTNEK-GTPYYHNRVTKQTSWIKP 109
Score = 27.9 bits (59), Expect = 5.1
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 260 GMTYYLNKYTKQSQWEKP 313
G YY N TK++QW KP
Sbjct: 137 GKPYYYNTLTKKTQWVKP 154
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 28.7 bits (61), Expect = 2.9
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 52 KDFQIIDYYRALRKPIGSIRGVHSSFFSSKE 144
KDF+ + R L+K IG IR ++ F SKE
Sbjct: 481 KDFEKYETARRLKKKIGGIRERYTDDFKSKE 511
>Z81125-3|CAB03384.1| 790|Caenorhabditis elegans Hypothetical
protein T22A3.5 protein.
Length = 790
Score = 28.3 bits (60), Expect = 3.9
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +2
Query: 209 QEDSLPEGWQARKSRSTGMTYYLNKYTKQSQWEKP 313
+ + LPEGW S +GM Y +K+T+ KP
Sbjct: 172 KSNPLPEGWTV-ISHQSGMPVYYHKFTRVVTHSKP 205
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 27.5 bits (58), Expect = 6.8
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +3
Query: 306 RSRGALQLLMKMRTIAHLRRCS 371
R RG Q++ M T+AHL +C+
Sbjct: 270 RRRGQGQMIRSMNTLAHLHKCT 291
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,232,698
Number of Sequences: 27780
Number of extensions: 244620
Number of successful extensions: 575
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1123720628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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