Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_N14
         (566 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK075134-1|BAC11425.1|  207|Homo sapiens protein ( Homo sapiens ...    30   6.5  
AF089726-1|AAG16773.1| 1090|Homo sapiens sodium bicarbonate cotr...    29   8.6  
AF053755-1|AAF21720.1| 1000|Homo sapiens bicarbonate transporter...    29   8.6  
AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate cotr...    29   8.6  
AB012130-1|BAA25898.1| 1018|Homo sapiens sodium bicarbonate cotr...    29   8.6  

>AK075134-1|BAC11425.1|  207|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90653 fis, clone PLACE1004519. ).
          Length = 207

 Score = 29.9 bits (64), Expect = 6.5
 Identities = 16/46 (34%), Positives = 27/46 (58%)
 Frame = +3

Query: 216 GGFPDRCPTPPADALSTSTNPSTLVQCNNYVVLCLIF*NYYSINVF 353
           G F  R P P +D++STS+   T+V   +   +C++F N  S+ V+
Sbjct: 141 GSFRGRHPLPGSDSVSTSSCLYTVVFWAHLRSICVVFKNLISLFVW 186


>AF089726-1|AAG16773.1| 1090|Homo sapiens sodium bicarbonate
           cotransporter 2b protein.
          Length = 1090

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = +2

Query: 311 FMFDFLKLLFNQCIFAIMFLKCFLGLSFMKMMDGNRRQTEEGLLDGEDQPRGAVLMGE*H 490
           F+ DF   L  QC+ +I+FL C   +S +    G   +  EG +   +   GA L G  +
Sbjct: 472 FLSDFKDALSLQCLASILFLYCAC-MSPVITFGGLLGEATEGRISAIESLFGASLTGIAY 530

Query: 491 DVCEGQEL 514
            +  GQ L
Sbjct: 531 SLFAGQPL 538


>AF053755-1|AAF21720.1| 1000|Homo sapiens bicarbonate transporter
           protein.
          Length = 1000

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = +2

Query: 311 FMFDFLKLLFNQCIFAIMFLKCFLGLSFMKMMDGNRRQTEEGLLDGEDQPRGAVLMGE*H 490
           F+ DF   L  QC+ +I+FL C   +S +    G   +  EG +   +   GA L G  +
Sbjct: 382 FLSDFKDALSLQCLASILFLYCAC-MSPVITFGGLLGEATEGRISAIESLFGASLTGIAY 440

Query: 491 DVCEGQEL 514
            +  GQ L
Sbjct: 441 SLFAGQPL 448


>AF047033-1|AAD38322.1| 1214|Homo sapiens sodium bicarbonate
           cotransporter 3 protein.
          Length = 1214

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = +2

Query: 311 FMFDFLKLLFNQCIFAIMFLKCFLGLSFMKMMDGNRRQTEEGLLDGEDQPRGAVLMGE*H 490
           F+ DF   L  QC+ +I+FL C   +S +    G   +  EG +   +   GA L G  +
Sbjct: 596 FLSDFKDALSLQCLASILFLYCAC-MSPVITFGGLLGEATEGRISAIESLFGASLTGIAY 654

Query: 491 DVCEGQEL 514
            +  GQ L
Sbjct: 655 SLFAGQPL 662


>AB012130-1|BAA25898.1| 1018|Homo sapiens sodium bicarbonate
           cotransporter2 protein.
          Length = 1018

 Score = 29.5 bits (63), Expect = 8.6
 Identities = 21/68 (30%), Positives = 32/68 (47%)
 Frame = +2

Query: 311 FMFDFLKLLFNQCIFAIMFLKCFLGLSFMKMMDGNRRQTEEGLLDGEDQPRGAVLMGE*H 490
           F+ DF   L  QC+ +I+FL C   +S +    G   +  EG +   +   GA L G  +
Sbjct: 382 FLSDFKDALSLQCLASILFLYCAC-MSPVITFGGLLGEATEGRISAIESLFGASLTGIAY 440

Query: 491 DVCEGQEL 514
            +  GQ L
Sbjct: 441 SLFAGQPL 448


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,941,110
Number of Sequences: 237096
Number of extensions: 1899302
Number of successful extensions: 7953
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7953
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5759818212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)