Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_N12
         (337 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   1.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   4.0  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    20   9.2  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   9.2  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = +2

Query: 239 NKLKSGYCRCTPNCCAK 289
           NK +  +    PNCC K
Sbjct: 353 NKFREAFKLMLPNCCGK 369


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
          beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 4.0
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -1

Query: 82 CRFLQPGGS 56
          C FL PGGS
Sbjct: 68 CEFLNPGGS 76


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/21 (33%), Positives = 13/21 (61%)
 Frame = -1

Query: 73  LQPGGSTSLERRHRGAPAVPF 11
           LQPG +T  ++  + +  +PF
Sbjct: 535 LQPGKNTIEQKSTKSSVTIPF 555


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.8 bits (39), Expect = 9.2
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 67  PGGSTSLERRHRGA 26
           PG +  +  RHRGA
Sbjct: 201 PGHAAFISMRHRGA 214


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,840
Number of Sequences: 438
Number of extensions: 2331
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)