Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N11
(542 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 22 4.6
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 8.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 8.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 8.1
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 8.1
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 8.1
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 8.1
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 8.1
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 8.1
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 8.1
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 8.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 21 8.1
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 8.1
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 8.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.1
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.8 bits (44), Expect = 4.6
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +3
Query: 342 GQGAFGNMCRGGRMFAP 392
G G FG++CRG P
Sbjct: 640 GGGEFGDVCRGKLKLPP 656
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 61 QRSYSSKKHYRRWQRPS 11
Q+SY +++ YR+++ S
Sbjct: 47 QKSYKNEREYRKYRETS 63
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.0 bits (42), Expect = 8.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 61 QRSYSSKKHYRRWQRPS 11
Q+SY +++ YR+++ S
Sbjct: 47 QKSYKNEREYRKYRETS 63
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 120 RHIGPLTPFPPRFIPPDMYR 139
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 8.1
Identities = 7/17 (41%), Positives = 12/17 (70%)
Frame = -2
Query: 61 QRSYSSKKHYRRWQRPS 11
QRSY ++ YR+++ S
Sbjct: 280 QRSYKNENSYRKYRETS 296
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 368 RHIGPLTPFPPRFIPPDMYR 387
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 8.1
Identities = 6/17 (35%), Positives = 13/17 (76%)
Frame = -2
Query: 61 QRSYSSKKHYRRWQRPS 11
Q+SY +++ YR+++ S
Sbjct: 280 QKSYKNEREYRKYRETS 296
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 353 RHIGPLTPFPPRFIPPDMYR 372
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.0 bits (42), Expect = 8.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Frame = -2
Query: 370 RHMLPNAPCPDLWVPPPRTR 311
RH+ P P P ++PP R
Sbjct: 369 RHIGPLTPFPPRFIPPDMYR 388
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,717
Number of Sequences: 438
Number of extensions: 3028
Number of successful extensions: 45
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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