Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_N10
         (276 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p pro...    41   3e-04
AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA...    41   3e-04
BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p pro...    36   0.006
AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA...    36   0.006

>AY060986-1|AAL28534.1|  215|Drosophila melanogaster GM14292p
           protein.
          Length = 215

 Score = 40.7 bits (91), Expect = 3e-04
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 129 MPRGKFTNHKGRNRKFTSP 185
           MPRGKF NHKGR+R FTSP
Sbjct: 1   MPRGKFVNHKGRSRHFTSP 19


>AE014298-642|AAF45957.1|  215|Drosophila melanogaster CG11444-PA
           protein.
          Length = 215

 Score = 40.7 bits (91), Expect = 3e-04
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 129 MPRGKFTNHKGRNRKFTSP 185
           MPRGKF NHKGR+R FTSP
Sbjct: 1   MPRGKFVNHKGRSRHFTSP 19


>BT024370-1|ABC86432.1|  189|Drosophila melanogaster IP07252p
           protein.
          Length = 189

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +3

Query: 129 MPRGKFTNHKGRNRKFTSP 185
           MPRGKF ++KGR R+FTSP
Sbjct: 1   MPRGKFLSYKGRTRQFTSP 19


>AE014134-1632|AAF52770.1|  189|Drosophila melanogaster CG4438-PA
           protein.
          Length = 189

 Score = 36.3 bits (80), Expect = 0.006
 Identities = 14/19 (73%), Positives = 17/19 (89%)
 Frame = +3

Query: 129 MPRGKFTNHKGRNRKFTSP 185
           MPRGKF ++KGR R+FTSP
Sbjct: 1   MPRGKFLSYKGRTRQFTSP 19


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,791,648
Number of Sequences: 53049
Number of extensions: 121436
Number of successful extensions: 205
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 205
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 24,988,368
effective HSP length: 70
effective length of database: 21,274,938
effective search space used: 446773698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)