Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N09
(459 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L24804-1|AAA18537.1| 160|Homo sapiens p23 protein. 60 3e-09
BC003005-1|AAH03005.1| 160|Homo sapiens prostaglandin E synthas... 60 3e-09
BC058912-1|AAH58912.1| 362|Homo sapiens protein tyrosine phosph... 42 0.001
BC047685-1|AAH47685.1| 362|Homo sapiens protein tyrosine phosph... 42 0.001
BC035508-1|AAH35508.1| 361|Homo sapiens PTPLAD1 protein protein. 42 0.001
AK074898-1|BAC11277.1| 362|Homo sapiens protein ( Homo sapiens ... 42 0.001
AK027421-1|BAB55101.1| 362|Homo sapiens protein ( Homo sapiens ... 42 0.001
AJ271091-1|CAB69070.1| 370|Homo sapiens B-ind1 protein protein. 42 0.001
BC019324-1|AAH19324.1| 525|Homo sapiens alanyl-tRNA synthetase ... 33 0.36
BC004172-1|AAH04172.1| 525|Homo sapiens alanyl-tRNA synthetase ... 33 0.36
>L24804-1|AAA18537.1| 160|Homo sapiens p23 protein.
Length = 160
Score = 60.5 bits (140), Expect = 3e-09
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +2
Query: 101 PPSVSWAQRSARVFLTFNVECVKP-DIKIERKTISFKGICEPEKKLHEVVIPLYSQVDPD 277
P S W R VF+ F VE K ++ E+ ++F + + H I L+ +DP+
Sbjct: 3 PASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPN 62
Query: 278 KSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRWQ 415
S + R I L K + + WP LT ++ K +WL VDFN W+
Sbjct: 63 DSKHKRTDRSILCCLRKGESGQS-WPRLTKERAKLNWLSVDFNNWK 107
>BC003005-1|AAH03005.1| 160|Homo sapiens prostaglandin E synthase 3
(cytosolic) protein.
Length = 160
Score = 60.5 bits (140), Expect = 3e-09
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Frame = +2
Query: 101 PPSVSWAQRSARVFLTFNVECVKP-DIKIERKTISFKGICEPEKKLHEVVIPLYSQVDPD 277
P S W R VF+ F VE K ++ E+ ++F + + H I L+ +DP+
Sbjct: 3 PASAKWYDRRDYVFIEFCVEDSKDVNVNFEKSKLTFSCLGGSDNFKHLNEIDLFHCIDPN 62
Query: 278 KSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRWQ 415
S + R I L K + + WP LT ++ K +WL VDFN W+
Sbjct: 63 DSKHKRTDRSILCCLRKGESGQS-WPRLTKERAKLNWLSVDFNNWK 107
>BC058912-1|AAH58912.1| 362|Homo sapiens protein tyrosine
phosphatase-like A domain containing 1 protein.
Length = 362
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 77 MSSEIITPPPSVSWAQRSARVFLTFNVECVK-PDIKIERKTISFKGICEPEK--KLHEVV 247
M ++++TP V WAQR ++L + V+ P I I + FK K ++E
Sbjct: 1 MENQVLTP--HVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFH 58
Query: 248 IPLYSQVDPDKSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRW 412
+ V P+ Y R + + + K+ + +W LT +K+ +L DF+RW
Sbjct: 59 LEFLDLVKPEP-VYKLTQRQVNITVQKKVSQ--WWERLTKQEKRPLFLAPDFDRW 110
>BC047685-1|AAH47685.1| 362|Homo sapiens protein tyrosine
phosphatase-like A domain containing 1 protein.
Length = 362
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 77 MSSEIITPPPSVSWAQRSARVFLTFNVECVK-PDIKIERKTISFKGICEPEK--KLHEVV 247
M ++++TP V WAQR ++L + V+ P I I + FK K ++E
Sbjct: 1 MENQVLTP--HVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFH 58
Query: 248 IPLYSQVDPDKSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRW 412
+ V P+ Y R + + + K+ + +W LT +K+ +L DF+RW
Sbjct: 59 LEFLDLVKPEP-VYKLTQRQVNITVQKKVSQ--WWERLTKQEKRPLFLAPDFDRW 110
>BC035508-1|AAH35508.1| 361|Homo sapiens PTPLAD1 protein protein.
Length = 361
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 77 MSSEIITPPPSVSWAQRSARVFLTFNVECVK-PDIKIERKTISFKGICEPEK--KLHEVV 247
M ++++TP V WAQR ++L + V+ P I I + FK K ++E
Sbjct: 1 MENQVLTP--HVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFH 58
Query: 248 IPLYSQVDPDKSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRW 412
+ V P+ Y R + + + K+ + +W LT +K+ +L DF+RW
Sbjct: 59 LEFLDLVKPEP-VYKLTQRQVNITVQKKVSQ--WWERLTKQEKRPLFLAPDFDRW 110
>AK074898-1|BAC11277.1| 362|Homo sapiens protein ( Homo sapiens
cDNA FLJ90417 fis, clone NT2RP3000171, weakly similar to
Mus musculus partial mRNA for B-IND1 protein (B-ind1
gene). ).
Length = 362
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 77 MSSEIITPPPSVSWAQRSARVFLTFNVECVK-PDIKIERKTISFKGICEPEK--KLHEVV 247
M ++++TP V WAQR ++L + V+ P I I + FK K ++E
Sbjct: 1 MENQVLTP--HVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFH 58
Query: 248 IPLYSQVDPDKSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRW 412
+ V P+ Y R + + + K+ + +W LT +K+ +L DF+RW
Sbjct: 59 LEFLDLVKPEP-VYKLTQRQVNITVQKKVSQ--WWERLTKQEKRPLFLAPDFDRW 110
>AK027421-1|BAB55101.1| 362|Homo sapiens protein ( Homo sapiens
cDNA FLJ14515 fis, clone NT2RM1000800, weakly similar to
Mus musculus partial mRNA for B-IND1 protein. ).
Length = 362
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 77 MSSEIITPPPSVSWAQRSARVFLTFNVECVK-PDIKIERKTISFKGICEPEK--KLHEVV 247
M ++++TP V WAQR ++L + V+ P I I + FK K ++E
Sbjct: 1 MENQVLTP--HVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFH 58
Query: 248 IPLYSQVDPDKSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRW 412
+ V P+ Y R + + + K+ + +W LT +K+ +L DF+RW
Sbjct: 59 LKFLDLVKPEP-VYKLTQRQVNITVQKKVSQ--WWERLTKQEKRPLFLAPDFDRW 110
>AJ271091-1|CAB69070.1| 370|Homo sapiens B-ind1 protein protein.
Length = 370
Score = 41.9 bits (94), Expect = 0.001
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Frame = +2
Query: 77 MSSEIITPPPSVSWAQRSARVFLTFNVECVK-PDIKIERKTISFKGICEPEK--KLHEVV 247
M ++++TP V WAQR ++L + V+ P I I + FK K ++E
Sbjct: 1 MENQVLTP--HVYWAQRHRELYLRVELSDVQNPAISITENVLHFKAQGHGAKGDNVYEFH 58
Query: 248 IPLYSQVDPDKSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRW 412
+ V P+ Y R + + + K+ + +W LT +K+ +L DF+RW
Sbjct: 59 LEFLDLVKPEP-VYKLTQRQVNITVQKKVSQ--WWERLTKQEKRPLFLAPDFDRW 110
>BC019324-1|AAH19324.1| 525|Homo sapiens alanyl-tRNA synthetase
domain containing 1 protein.
Length = 525
Score = 33.5 bits (73), Expect = 0.36
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 248 IPLYSQVDPDKSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRWQ 415
I Y++V+ S R I + K ++ WP LT + K WL VDF+ W+
Sbjct: 36 IEFYAKVNSKDSQDKRSSRSITCFVRKWK-EKVAWPRLTKEDIKPVWLSVDFDNWR 90
>BC004172-1|AAH04172.1| 525|Homo sapiens alanyl-tRNA synthetase
domain containing 1 protein.
Length = 525
Score = 33.5 bits (73), Expect = 0.36
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +2
Query: 248 IPLYSQVDPDKSAYINKGRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRWQ 415
I Y++V+ S R I + K ++ WP LT + K WL VDF+ W+
Sbjct: 36 IEFYAKVNSKDSQDKRSSRSITCFVRKWK-EKVAWPRLTKEDIKPVWLSVDFDNWR 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,738,093
Number of Sequences: 237096
Number of extensions: 1189428
Number of successful extensions: 6434
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6375
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6431
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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