Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N09
(459 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13642-6|AAG00038.1| 175|Caenorhabditis elegans Hypothetical pr... 70 7e-13
U40800-12|AAA81496.1| 88|Caenorhabditis elegans Hypothetical p... 32 0.23
Z82073-2|CAB04925.1| 358|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical pr... 27 5.0
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 6.6
Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical p... 27 8.7
Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical p... 27 8.7
Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 8.7
AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein. 27 8.7
>U13642-6|AAG00038.1| 175|Caenorhabditis elegans Hypothetical
protein ZC395.10 protein.
Length = 175
Score = 70.1 bits (164), Expect = 7e-13
Identities = 35/106 (33%), Positives = 60/106 (56%), Gaps = 2/106 (1%)
Frame = +2
Query: 104 PSVSWAQRSARVFLTFNVECVK-PDIKIERKTISFKGICEPEKKLHEVVIPLYSQVDPDK 280
P+V WAQR + V+LT V+ K ++K E + F+G + +K +E + + ++DP
Sbjct: 5 PTVLWAQRESLVYLTIEVDEAKIEELKGEGNKLHFQGSSKTDK--YEATLEFFDEIDPAS 62
Query: 281 SAYINKG-RLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNRWQ 415
+ R++E+ + K+ +WP L +K K HWLKVDF +W+
Sbjct: 63 VKHTGSSTRVVEITVQKKTP--AWWPRLLQNKGKVHWLKVDFGKWK 106
>U40800-12|AAA81496.1| 88|Caenorhabditis elegans Hypothetical
protein D2096.9 protein.
Length = 88
Score = 31.9 bits (69), Expect = 0.23
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +2
Query: 254 LYSQVDPDKSAYINK-GRLIEVVLAKENTDEPFWPSLTSDKKKHHWLKVDFNR 409
LYS DPD+ INK L+ +V + EPFW + +KKK + VD ++
Sbjct: 31 LYSFQDPDEFEIINKRSPLLSLVGSNVRFTEPFWQRV-QNKKKIRSVAVDADK 82
>Z82073-2|CAB04925.1| 358|Caenorhabditis elegans Hypothetical
protein W06D12.4 protein.
Length = 358
Score = 28.3 bits (60), Expect = 2.8
Identities = 22/80 (27%), Positives = 40/80 (50%), Gaps = 7/80 (8%)
Frame = -3
Query: 385 VVFFFITCKRWPERLISILFS*YYFYKSAFVNIRAFIWIYLGI-----*RYYNFMKFLLW 221
++ +F+ KR+P + ++L S Y + A + FI+ Y I R++NF F+ W
Sbjct: 79 ILVYFVLNKRFPSKWWAVLASEIYGFFLAVIFAVHFIFRYWTITKNDKIRFFNFPYFICW 138
Query: 220 F--TYAFEGYCFSFNFDIWF 167
+Y F G +S+ + F
Sbjct: 139 IIGSYYF-GVEYSYILHVEF 157
>Z68159-7|CAA92286.1| 604|Caenorhabditis elegans Hypothetical
protein C33D9.8 protein.
Length = 604
Score = 27.5 bits (58), Expect = 5.0
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = -3
Query: 187 FNFDIWFYTFNVKRQKYSCTSLSP 116
FN+ ++ Y F +K+ +Y C + P
Sbjct: 196 FNYTLFSYFFGIKKTEYICIKMDP 219
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = -3
Query: 226 LWFTYAFEGYCFSFNFDIWFYTFNVKRQKYS 134
+WF F G+C N W Y V+R +S
Sbjct: 41 IWFLVYFYGFCVYSNILYWLYFEFVERADHS 71
>Z22176-13|CAO82058.1| 1185|Caenorhabditis elegans Hypothetical
protein ZK1098.10d protein.
Length = 1185
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 56 IIKLFANMSSEIITPPPSVSWAQRSA-RVFLTFNVECVKPDIKIERK 193
I + F+++ + +TPP S + S+ R +T +VE + PD+ ER+
Sbjct: 478 IWEFFSSLLGDSVTPPASSRGNRASSSRGKMTRSVEYIDPDMISERR 524
>Z22176-10|CAD45611.1| 1157|Caenorhabditis elegans Hypothetical
protein ZK1098.10b protein.
Length = 1157
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 56 IIKLFANMSSEIITPPPSVSWAQRSA-RVFLTFNVECVKPDIKIERK 193
I + F+++ + +TPP S + S+ R +T +VE + PD+ ER+
Sbjct: 478 IWEFFSSLLGDSVTPPASSRGNRASSSRGKMTRSVEYIDPDMISERR 524
>Z22176-9|CAA80140.1| 1139|Caenorhabditis elegans Hypothetical
protein ZK1098.10a protein.
Length = 1139
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 56 IIKLFANMSSEIITPPPSVSWAQRSA-RVFLTFNVECVKPDIKIERK 193
I + F+++ + +TPP S + S+ R +T +VE + PD+ ER+
Sbjct: 460 IWEFFSSLLGDSVTPPASSRGNRASSSRGKMTRSVEYIDPDMISERR 506
>AF424978-1|AAL23934.1| 1157|Caenorhabditis elegans UNC-16 protein.
Length = 1157
Score = 26.6 bits (56), Expect = 8.7
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 56 IIKLFANMSSEIITPPPSVSWAQRSA-RVFLTFNVECVKPDIKIERK 193
I + F+++ + +TPP S + S+ R +T +VE + PD+ ER+
Sbjct: 478 IWEFFSSLLGDSVTPPASSRGNRASSSRGKMTRSVEYIDPDMISERR 524
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,859,616
Number of Sequences: 27780
Number of extensions: 203470
Number of successful extensions: 499
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 498
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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