Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N08
(464 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absent... 54 4e-08
AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical ... 54 4e-08
U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical pr... 34 0.044
Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical pr... 33 0.10
U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical pr... 32 0.18
AC024817-27|AAY86296.1| 636|Caenorhabditis elegans Hypothetical... 32 0.18
Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical pr... 31 0.54
AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical ... 29 1.6
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 28 2.9
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical pr... 27 6.6
U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical pr... 27 6.6
U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical pr... 27 6.6
U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical pr... 27 6.6
AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical ... 27 6.6
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 27 6.6
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 27 6.6
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 27 8.8
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 27 8.8
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 27 8.8
>U89792-1|AAB94380.1| 339|Caenorhabditis elegans seven-in-absentia
protein homologue-1 protein.
Length = 339
Score = 54.4 bits (125), Expect = 4e-08
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +3
Query: 180 QCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPVCRALFFGTRNYAMEELIANVR 347
+CPVC E QC+ GH VC C+ +L CP CR RN +E++ VR
Sbjct: 89 ECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKIANTVR 144
>AC024759-5|AAK68432.1| 419|Caenorhabditis elegans Hypothetical
protein Y37E11AR.2 protein.
Length = 419
Score = 54.4 bits (125), Expect = 4e-08
Identities = 22/56 (39%), Positives = 29/56 (51%)
Frame = +3
Query: 180 QCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPVCRALFFGTRNYAMEELIANVR 347
+CPVC E QC+ GH VC C+ +L CP CR RN +E++ VR
Sbjct: 155 ECPVCLEYMLPPYMQCSSGHLVCSNCRPKLQCCPTCRGPTPSVRNLGLEKIANTVR 210
>U39653-1|AAM69065.2| 2471|Caenorhabditis elegans Hypothetical
protein T13H2.5a protein.
Length = 2471
Score = 34.3 bits (75), Expect = 0.044
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 5/41 (12%)
Frame = +3
Query: 183 CPVCYEIPSGQIFQCNEGHHVCDQCKIRL-----DVCPVCR 290
C VC E+ G I GH CDQC + + CP CR
Sbjct: 162 CDVCQELIQGSIMTKKCGHRFCDQCILVAFMRSGNTCPTCR 202
>Z70681-2|CAA94578.2| 203|Caenorhabditis elegans Hypothetical
protein C30F2.2 protein.
Length = 203
Score = 33.1 bits (72), Expect = 0.10
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 6/64 (9%)
Frame = +3
Query: 180 QCPVCYEIPSGQIFQ-CNE--GHHVCDQCKIRLDVCPVCRA--LFFGT-RNYAMEELIAN 341
+CP C E + C GH +C +C+ ++ CP+C+ FFGT NY + +
Sbjct: 9 RCPTCLEDYDDNSHRPCVGFCGHSICLKCQSKIVSCPLCKRKNAFFGTVINYQLLDSCLA 68
Query: 342 VRKL 353
+R+L
Sbjct: 69 IRQL 72
>U40799-2|AAA81480.1| 712|Caenorhabditis elegans Hypothetical
protein F42C5.4 protein.
Length = 712
Score = 32.3 bits (70), Expect = 0.18
Identities = 11/45 (24%), Positives = 23/45 (51%)
Frame = +3
Query: 216 IFQCNEGHHVCDQCKIRLDVCPVCRALFFGTRNYAMEELIANVRK 350
+ CN H +C QC + CP+C+ + NY +++ + ++
Sbjct: 51 VSSCN--HSLCSQCFDKFTECPICKEPLVRSENYQARKIVEHFKE 93
>AC024817-27|AAY86296.1| 636|Caenorhabditis elegans Hypothetical
protein Y54G2A.40 protein.
Length = 636
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 225 CNEGHHVCDQCKIRLDVCPVCRALFFGTRNYAMEEL 332
C+ H +C QC + CP+C T NYA ++
Sbjct: 31 CSCQHSLCTQCFNKYKNCPICAKPLVRTENYAARQI 66
>Z81486-5|CAB03987.1| 570|Caenorhabditis elegans Hypothetical
protein C53A5.6 protein.
Length = 570
Score = 31.5 bits (68), Expect = 0.31
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 10/70 (14%)
Frame = +3
Query: 180 QCPVCY-----EIPSGQIFQCNEGHHVCDQCKIRL--DVCPVC---RALFFGTRNYAMEE 329
+C +CY E+ I C GH +C+ CK ++ CP C A T NY + E
Sbjct: 8 ECIICYNEYDTELRKPCIGTC--GHSICESCKHQMVSSKCPQCNREEAFAITTINYQVLE 65
Query: 330 LIANVRKLRA 359
LI + + +++
Sbjct: 66 LIKHFKSMQS 75
>Z81505-1|CAB04122.1| 673|Caenorhabditis elegans Hypothetical
protein F16A11.1 protein.
Length = 673
Score = 30.7 bits (66), Expect = 0.54
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +3
Query: 183 CPVCYEIP-SGQIFQCNEGHHVCDQCKIRLDVCPVCR 290
C +C+ P S + CN D C + +D CP+CR
Sbjct: 564 CTICFAAPGSTTLLPCNHDGFCSDCCNM-MDHCPLCR 599
>AF067217-1|AAY55828.1| 191|Caenorhabditis elegans Hypothetical
protein F56A6.5 protein.
Length = 191
Score = 29.1 bits (62), Expect = 1.6
Identities = 14/42 (33%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Frame = +3
Query: 180 QCPVCY-EIPSGQIFQC--NEGHHVCDQCKIRL--DVCPVCR 290
+C +CY E C GH +CD+C+++L CP C+
Sbjct: 5 ECSICYDEYDHDTQIPCIGTCGHTICDRCRLQLLNKRCPHCK 46
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 28.3 bits (60), Expect = 2.9
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +3
Query: 180 QCPVCYEIPSGQIFQCNEGHHVCDQCKIRLDVCPVC 287
Q PVCYE + + C+ ++C+ + + + VC
Sbjct: 493 QPPVCYEFTANLLLLCHSTKYICEGFQATVFIGSVC 528
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/41 (29%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Frame = +3
Query: 180 QCPVCYEIPSGQIFQCNEGHHVCDQCKIR----LDVCPVCR 290
QC +C+++ + H +C C R VCP+CR
Sbjct: 25 QCHICFQVNHEPVTFLTCKHSICAGCAGRWLSSCSVCPMCR 65
>Z92973-8|CAO82049.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 97 RKL--FLEFVCLLPLVTTRQIIFLKHSWL*QIL 5
RKL FL+ L ++T ++FLKH+ L +L
Sbjct: 414 RKLNHFLKVTAFLDVITVENVVFLKHTLLPSLL 446
>Z81554-6|CAO82038.1| 517|Caenorhabditis elegans Hypothetical
protein Y6G8.8 protein.
Length = 517
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Frame = -2
Query: 97 RKL--FLEFVCLLPLVTTRQIIFLKHSWL*QIL 5
RKL FL+ L ++T ++FLKH+ L +L
Sbjct: 414 RKLNHFLKVTAFLDVITVENVVFLKHTLLPSLL 446
>U58751-8|AAB00659.2| 635|Caenorhabditis elegans Hypothetical
protein C07G1.2 protein.
Length = 635
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +3
Query: 240 HVCDQCKIRLDVCPVCRALFFGTRNYAME 326
HVCD R + +CR L FG Y +E
Sbjct: 452 HVCDDNYSREKLSSICRVLGFGDPIYTVE 480
>U39644-1|AAA80359.2| 393|Caenorhabditis elegans Hypothetical
protein T10E10.3 protein.
Length = 393
Score = 27.1 bits (57), Expect = 6.6
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +1
Query: 175 FYNVLCAMKYLQVKFSNVMKVIMCVTSVKFVLMCALSAEHY 297
F+NVL + +++ V+ C F+L C +S++H+
Sbjct: 294 FHNVLYSTRWMYTSVQVSTTVVTCSKVANFILFC-MSSKHF 333
>U28942-1|AAA68355.2| 441|Caenorhabditis elegans Hypothetical
protein F56D3.1 protein.
Length = 441
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 36 KIICRVVTRGRRHTNSRKSFLGNCKDSLRMSRRTV 140
+I C R RR R+ F G + R+ R+TV
Sbjct: 360 RIFCVTCQRPRRRPAGRRPFRGQARRGQRLGRKTV 394
>AL132876-2|CAB60843.3| 534|Caenorhabditis elegans Hypothetical
protein Y105E8A.2 protein.
Length = 534
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 273 HQDEFYTGHTHDDLHYIGKFDLKVFHSTQDIVK 175
H+D+ TG Y+G FD + ST + VK
Sbjct: 131 HEDKMLTGQVSRTEFYLGNFDSALTASTNEQVK 163
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 180 QCPVCYEIPSGQIFQCNEGHHVCDQCKIRL 269
+CP+CY I + Q GH +C C RL
Sbjct: 20 ECPICYNI-YDKPMQMGCGHTLCSTCIGRL 48
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +3
Query: 180 QCPVCYEIPSGQIFQCNEGHHVCDQCKIRL 269
+CP+CY I + Q GH +C C RL
Sbjct: 20 ECPICYNI-YDKPMQMGCGHTLCSTCIGRL 48
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 180 QCPV-CYEIPSGQIFQCNEGHHVCDQ 254
QCPV + +P C + HH CDQ
Sbjct: 734 QCPVNSFMVPDTNNTVCKKCHHECDQ 759
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 180 QCPV-CYEIPSGQIFQCNEGHHVCDQ 254
QCPV + +P C + HH CDQ
Sbjct: 734 QCPVNSFMVPDTNNTVCKKCHHECDQ 759
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 180 QCPV-CYEIPSGQIFQCNEGHHVCDQ 254
QCPV + +P C + HH CDQ
Sbjct: 785 QCPVNSFMVPDTNNTVCKKCHHECDQ 810
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,184,040
Number of Sequences: 27780
Number of extensions: 208642
Number of successful extensions: 474
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 474
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -