Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N07
(436 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 220 3e-58
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 220 3e-58
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 220 3e-58
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 220 3e-58
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 220 3e-58
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 220 3e-58
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 220 3e-58
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 220 3e-58
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 220 3e-58
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 216 5e-57
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 214 3e-56
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 133 6e-32
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 109 1e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 108 2e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 100 5e-22
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 100 5e-22
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 100 5e-22
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 95 3e-20
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 70 8e-13
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.002
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.002
Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical pr... 30 0.83
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 28 2.5
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 5.9
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 5.9
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 27 5.9
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 27 5.9
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 27 5.9
Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical pr... 27 7.8
U40954-7|AAB52654.2| 145|Caenorhabditis elegans Hypothetical pr... 27 7.8
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 27 7.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 220 bits (538), Expect = 3e-58
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELRVAPEEHPVLLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCD-KIAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD ++AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 220 bits (538), Expect = 3e-58
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELRVAPEEHPVLLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 30.7 bits (66), Expect = 0.48
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCDK-IAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD +AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 220 bits (538), Expect = 3e-58
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELRVAPEEHPVLLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCD-KIAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD ++AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 220 bits (538), Expect = 3e-58
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELRVAPEEHPVLLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCD-KIAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD ++AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 220 bits (538), Expect = 3e-58
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELRVAPEEHPVLLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCD-KIAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD ++AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 220 bits (538), Expect = 3e-58
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELRVAPEEHPVLLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 29.1 bits (62), Expect = 1.5
Identities = 17/33 (51%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCDK-IAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD +AAL++D +C+AGFAG P A FP
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFP 33
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 220 bits (538), Expect = 3e-58
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELRVAPEEHPVLLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCD-KIAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD ++AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 220 bits (538), Expect = 3e-58
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 20 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 79
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELRVAPEEHPVLLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 80 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 130
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 220 bits (538), Expect = 3e-58
Identities = 102/111 (91%), Positives = 104/111 (93%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 93
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELRVAPEEHPVLLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 94 ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 144
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCD-KIAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD ++AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 216 bits (528), Expect = 5e-57
Identities = 99/111 (89%), Positives = 103/111 (92%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 281
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN
Sbjct: 33 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN 92
Query: 282 ELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
ELR+APEEHPVLLTEAPL PK+NREKMTQIMFETFNTP MYV IQAVLSLY
Sbjct: 93 ELRIAPEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLY 143
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/32 (56%), Positives = 22/32 (68%), Gaps = 2/32 (6%)
Frame = +2
Query: 17 MCDKIAALVVDMDP-VCQAGFAGTTLP-ARFP 106
M ++IAALVVD +C+AGFAG P A FP
Sbjct: 1 MEEEIAALVVDNGSGMCKAGFAGDDAPRAVFP 32
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 214 bits (522), Expect = 3e-56
Identities = 98/100 (98%), Positives = 98/100 (98%)
Frame = +3
Query: 135 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 314
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 315 LLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
LLTEAPL PKANREKMTQIMFETFNTP MYVAIQAVLSLY
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 100
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 133 bits (321), Expect = 6e-32
Identities = 57/102 (55%), Positives = 77/102 (75%), Gaps = 1/102 (0%)
Frame = +3
Query: 132 VMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEH 308
VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEH
Sbjct: 46 VMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEH 105
Query: 309 PVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
PVLLT+APL P NRE+ +I FETFN P +Y+ +QAVLSLY
Sbjct: 106 PVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLY 147
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 109 bits (261), Expect = 1e-24
Identities = 51/101 (50%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = +3
Query: 132 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 308
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 309 PVLLTEAPLKPKANREKMTQIMFETFNTPGMYVAIQAVLSL 431
LLTE PL NRE +IMFE+FN PG+Y+A+QAVL+L
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLAL 156
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 108 bits (259), Expect = 2e-24
Identities = 50/95 (52%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +3
Query: 153 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 329
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 330 PLKPKANREKMTQIMFETFNTPGMYVAIQAVLSLY 434
PL P +NREKM Q+MFE + +YVA+QAVL+LY
Sbjct: 113 PLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLY 147
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 100 bits (239), Expect = 5e-22
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 260
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 30.7 bits (66), Expect = 0.48
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCDK-IAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD +AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 100 bits (239), Expect = 5e-22
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 260
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCD-KIAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD ++AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 100 bits (239), Expect = 5e-22
Identities = 46/53 (86%), Positives = 48/53 (90%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 260
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCD-KIAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD ++AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 94.7 bits (225), Expect = 3e-20
Identities = 43/50 (86%), Positives = 45/50 (90%)
Frame = +3
Query: 102 SLIVDDSSQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 251
S++ QGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 34 SIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
Score = 30.7 bits (66), Expect = 0.48
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +2
Query: 17 MCDK-IAALVVDMDP-VCQAGFAGTTLP-ARFP 106
MCD +AALVVD +C+AGFAG P A FP
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFP 33
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 69.7 bits (163), Expect = 8e-13
Identities = 30/73 (41%), Positives = 46/73 (63%)
Frame = +3
Query: 216 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANREKMTQIMFETFNTP 395
++ G++ +W+ EKI H++ N L P EHPVL +E+ +A REK+T+IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 396 GMYVAIQAVLSLY 434
Y++ VLS +
Sbjct: 154 AYYLSKNVVLSCF 166
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 150 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 323
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 324 EAPLKPKANREKMTQIMFETF 386
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 38.3 bits (85), Expect = 0.002
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
Frame = +3
Query: 150 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 323
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 324 EAPLKPKANREKMTQIMFETF 386
+ A + ++I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>Z82258-1|CAB05122.2| 906|Caenorhabditis elegans Hypothetical
protein C27H2.2a protein.
Length = 906
Score = 29.9 bits (64), Expect = 0.83
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = -1
Query: 265 CQIFSISSQLVTMPC-SMGYLSVRIPL----LLCASSPT*ESF*PMPTMTPCDESSTM-R 104
CQ+FS QLVTM SMG + +++ + LL + S T + P P D ++T+ R
Sbjct: 251 CQLFSSQPQLVTMNLNSMGTIKLQLVVTWLPLLASKSSTKPTIAPNP--PEIDGTTTIDR 308
Query: 103 EPGGERRSRETGLTYRIHVYDQRGN 29
+P R ++ G R+ + +Q N
Sbjct: 309 KPRIVLREKKRGSAARVAMKEQWRN 333
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 28.3 bits (60), Expect = 2.5
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 430 SESTAWIATYMPGVLKVSNIICVIFSLL 347
S TAWI PGV + N + IFS+L
Sbjct: 290 SIGTAWIFLLAPGVYNILNQLASIFSML 317
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 210 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 311
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 5.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 210 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 311
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 204 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRE 356
L Y + + N DM+ N +R A EE + + + P +PK++R+
Sbjct: 130 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 204 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRE 356
L Y + + N DM+ N +R A EE + + + P +PK++R+
Sbjct: 130 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.1 bits (57), Expect = 5.9
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 204 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRE 356
L Y + + N DM+ N +R A EE + + + P +PK++R+
Sbjct: 169 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 219
>Z81551-1|CAB04483.2| 335|Caenorhabditis elegans Hypothetical
protein F56A12.1 protein.
Length = 335
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Frame = +3
Query: 237 NWDDMEKIWHHTFYNE--LRVAPEEHPV 314
+++D++ IWHH Y E L+ E +PV
Sbjct: 172 HYNDLQDIWHHARYKESQLKRGKELNPV 199
>U40954-7|AAB52654.2| 145|Caenorhabditis elegans Hypothetical
protein ZK813.1 protein.
Length = 145
Score = 26.6 bits (56), Expect = 7.8
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 92 PARFPHRRRLVTGRHGRHGSEG 157
P + RR GRHGRHG G
Sbjct: 45 PRKHHRRRHGRRGRHGRHGRHG 66
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 26.6 bits (56), Expect = 7.8
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2
Query: 182 EQERYPHTQIPHRTRHRHQLGRYGEDLASHLLQ-----*AACSSRGAPSLAHRSSPQAQS 346
+Q++ H Q+P R RH GRY + + LQ + S+AHR P+ +
Sbjct: 712 QQQQQHHHQMPMDQRKRHSSGRYDALMGAMPLQQQPPPPPPSQFQHTDSIAHR--PRGRP 769
Query: 347 QQREDDTDYVRDLQHTRHVRSYPGRALTV 433
+ + V+ Q + R+ P RA TV
Sbjct: 770 KGTRHPSVAVQP-QRSGGARTLPPRAQTV 797
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,040,345
Number of Sequences: 27780
Number of extensions: 241996
Number of successful extensions: 883
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 880
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 735312162
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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