Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N06
(592 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 283 2e-76
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 283 2e-76
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 283 2e-76
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 283 2e-76
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 283 2e-76
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 281 1e-75
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 91 2e-18
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 32 1.7
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 32 1.7
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 32 1.7
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 32 1.7
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 32 1.7
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 31 2.3
BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein. 31 2.3
AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sortin... 31 4.0
AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sortin... 31 4.0
AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sortin... 31 4.0
AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sortin... 31 4.0
AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sortin... 31 4.0
AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sortin... 31 4.0
AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear ribonucle... 31 4.0
AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein. 31 4.0
AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein. 31 4.0
AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis p... 31 4.0
AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein. 31 4.0
U32178-1|AAB02179.1| 369|Homo sapiens deoxyhypusine synthase pr... 30 5.3
U26266-1|AAB02175.1| 321|Homo sapiens deoxyhypusine synthase pr... 30 5.3
DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short for... 30 7.0
DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short for... 30 7.0
DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short for... 30 7.0
DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short for... 30 7.0
DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short for... 30 7.0
DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short for... 30 7.0
BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein pr... 30 7.0
BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein. 30 7.0
BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 doma... 30 7.0
BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein. 30 7.0
BC029611-1|AAH29611.1| 400|Homo sapiens amyotrophic lateral scl... 30 7.0
AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250... 30 7.0
AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isofo... 30 7.0
AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isofor... 30 7.0
AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form p... 30 7.0
AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form ... 30 7.0
AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associ... 30 7.0
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 283 bits (695), Expect = 2e-76
Identities = 138/191 (72%), Positives = 163/191 (85%), Gaps = 1/191 (0%)
Frame = +3
Query: 12 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITNAKEIELHN-KKSI 188
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+I
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAI 60
Query: 189 IIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 368
II+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSR
Sbjct: 61 IIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSR 120
Query: 369 TLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHNVDTFQSVYKKL 548
TLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH V+TF VYKKL
Sbjct: 121 TLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKL 180
Query: 549 TVREVTFEFPE 581
T ++V FEFPE
Sbjct: 181 TGKDVNFEFPE 191
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 283 bits (695), Expect = 2e-76
Identities = 138/191 (72%), Positives = 163/191 (85%), Gaps = 1/191 (0%)
Frame = +3
Query: 12 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITNAKEIELHN-KKSI 188
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+I
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAI 60
Query: 189 IIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 368
II+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSR
Sbjct: 61 IIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSR 120
Query: 369 TLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHNVDTFQSVYKKL 548
TLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH V+TF VYKKL
Sbjct: 121 TLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKL 180
Query: 549 TVREVTFEFPE 581
T ++V FEFPE
Sbjct: 181 TGKDVNFEFPE 191
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 283 bits (695), Expect = 2e-76
Identities = 138/191 (72%), Positives = 163/191 (85%), Gaps = 1/191 (0%)
Frame = +3
Query: 12 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITNAKEIELHN-KKSI 188
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+I
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAI 60
Query: 189 IIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 368
II+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSR
Sbjct: 61 IIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSR 120
Query: 369 TLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHNVDTFQSVYKKL 548
TLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH V+TF VYKKL
Sbjct: 121 TLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKL 180
Query: 549 TVREVTFEFPE 581
T ++V FEFPE
Sbjct: 181 TGKDVNFEFPE 191
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 283 bits (695), Expect = 2e-76
Identities = 138/191 (72%), Positives = 163/191 (85%), Gaps = 1/191 (0%)
Frame = +3
Query: 12 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITNAKEIELHN-KKSI 188
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+I
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAI 60
Query: 189 IIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 368
II+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSR
Sbjct: 61 IIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSR 120
Query: 369 TLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHNVDTFQSVYKKL 548
TLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH V+TF VYKKL
Sbjct: 121 TLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKL 180
Query: 549 TVREVTFEFPE 581
T ++V FEFPE
Sbjct: 181 TGKDVNFEFPE 191
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 283 bits (695), Expect = 2e-76
Identities = 138/191 (72%), Positives = 163/191 (85%), Gaps = 1/191 (0%)
Frame = +3
Query: 12 VFKMSTKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITNAKEIELHN-KKSI 188
+F S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+I
Sbjct: 1 MFSSSAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAI 60
Query: 189 IIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSR 368
II+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSR
Sbjct: 61 IIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSR 120
Query: 369 TLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHNVDTFQSVYKKL 548
TLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH V+TF VYKKL
Sbjct: 121 TLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKL 180
Query: 549 TVREVTFEFPE 581
T ++V FEFPE
Sbjct: 181 TGKDVNFEFPE 191
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 281 bits (689), Expect = 1e-75
Identities = 137/187 (73%), Positives = 161/187 (86%), Gaps = 1/187 (0%)
Frame = +3
Query: 24 STKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITNAKEIELHN-KKSIIIYV 200
S KI+K +PD FE+ ISQAL+ELE NSDLKAQLREL IT AKEIE+ +K+III+V
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLRELNITAAKEIEVGGGRKAIIIFV 62
Query: 201 PMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQKRPRSRTLTS 380
P+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+ R+ILPKP+ K+R NKQKRPRSRTLT+
Sbjct: 63 PVPQLKSFQKIQVRLVRELEKKFSGKHVVFIAQRRILPKPTRKSRTKNKQKRPRSRTLTA 122
Query: 381 VYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHNVDTFQSVYKKLTVRE 560
V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH V+TF VYKKLT ++
Sbjct: 123 VHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVETFSGVYKKLTGKD 182
Query: 561 VTFEFPE 581
V FEFPE
Sbjct: 183 VNFEFPE 189
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 91.5 bits (217), Expect = 2e-18
Identities = 43/52 (82%), Positives = 48/52 (92%)
Frame = +3
Query: 363 SRTLTSVYDAILEDLVFPAEIVGKRIRVKLDGSQLIKVHLDKNQQTTIEHNV 518
SRTLT+V+DAILEDLVFP+EIVGKRIRVKLDGS+LIKVHLDK QQ +EH V
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKV 61
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 90 LVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKF 269
L +L+ + LK+ + N + H + +I VP ++ FQK++++ +E EK F
Sbjct: 103 LGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMF 162
Query: 270 SGK 278
GK
Sbjct: 163 KGK 165
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 90 LVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKF 269
L +L+ + LK+ + N + H + +I VP ++ FQK++++ +E EK F
Sbjct: 103 LGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMF 162
Query: 270 SGK 278
GK
Sbjct: 163 KGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 90 LVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKF 269
L +L+ + LK+ + N + H + +I VP ++ FQK++++ +E EK F
Sbjct: 103 LGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMF 162
Query: 270 SGK 278
GK
Sbjct: 163 KGK 165
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 31.9 bits (69), Expect = 1.7
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 129 LRELYITNAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 278
LR L +TN K L+ +I VP ++ FQK++++ +E EK F GK
Sbjct: 121 LRNL-VTNKKHYRLY----VIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 31.9 bits (69), Expect = 1.7
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 90 LVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKF 269
L +L+ + LK+ + N + H + +I VP ++ FQK++++ +E EK F
Sbjct: 103 LGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMF 162
Query: 270 SGK 278
GK
Sbjct: 163 KGK 165
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 31.5 bits (68), Expect = 2.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 535 TDWKVSTLCSIVVCWFLSRCTLMSCEPSSFTLMRLPTISA 416
T W ++ LCS++ W L CT + P L+ L T+S+
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSS 302
>BC073744-1|AAH73744.1| 648|Homo sapiens ITSN1 protein protein.
Length = 648
Score = 31.5 bits (68), Expect = 2.3
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEKK
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKK 645
>AL359204-2|CAI39538.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL359204-1|CAI39537.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL353710-2|CAH74106.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL353710-1|CAH74105.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL158159-2|CAI40936.1| 3174|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AL158159-1|CAI40935.1| 3095|Homo sapiens vacuolar protein sorting
13 homolog A (S. cerevisiae) protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AK223110-1|BAD96830.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 30.7 bits (66), Expect = 4.0
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +3
Query: 90 LVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKF 269
L +L+ + LK+ + N + H + +I VP ++ FQ+++++ +E EK F
Sbjct: 103 LGDLDPLASLKSLTYLSILRNPVTNKKHYRLYVIYKVPQVRVLDFQRVKLKERQEAEKMF 162
Query: 270 SGK 278
GK
Sbjct: 163 KGK 165
>AJ626859-1|CAF25186.1| 3069|Homo sapiens chorein 1D protein.
Length = 3069
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AJ608769-1|CAE75581.1| 3135|Homo sapiens chorein 2A protein.
Length = 3135
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AF337532-1|AAK61861.1| 3174|Homo sapiens chorea-acanthocytosis
protein.
Length = 3174
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>AB054005-1|BAB59128.1| 3095|Homo sapiens chorein protein.
Length = 3095
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/81 (25%), Positives = 39/81 (48%)
Frame = +3
Query: 174 NKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVGDRKILPKPSHKTRVANKQK 353
+K + + V MPK K + K+ + +R +KK G + + +PKP T V+ K
Sbjct: 751 SKAMVFMDVRMPKFKIYGKLPLISLRISDKKLQGIMELI----ESIPKPEPVTEVSAPVK 806
Query: 354 RPRSRTLTSVYDAILEDLVFP 416
+ +T TS+ + + + P
Sbjct: 807 SFQIQTSTSLGTSQISQKIIP 827
>U32178-1|AAB02179.1| 369|Homo sapiens deoxyhypusine synthase
protein.
Length = 369
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -3
Query: 398 QYGVINRSQCPGTGPFLFVGYT--CLVAGLGQDLTVTNEHNMLTAELLF*LTDKPDLDLL 225
Q+G + +S+ P T +F+GYT + +G+ + + +HNM+ ++L + DL+
Sbjct: 82 QHGDLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMV--DVLVTTAGGVEEDLI 139
Query: 224 ECL 216
+CL
Sbjct: 140 KCL 142
>U26266-1|AAB02175.1| 321|Homo sapiens deoxyhypusine synthase
protein.
Length = 321
Score = 30.3 bits (65), Expect = 5.3
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Frame = -3
Query: 398 QYGVINRSQCPGTGPFLFVGYT--CLVAGLGQDLTVTNEHNMLTAELLF*LTDKPDLDLL 225
Q+G + +S+ P T +F+GYT + +G+ + + +HNM+ ++L + DL+
Sbjct: 82 QHGDLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMV--DVLVTTAGGVEEDLI 139
Query: 224 ECL 216
+CL
Sbjct: 140 KCL 142
>DQ679757-1|ABG74698.1| 1215|Homo sapiens intersectin 1 short form
variant 5 protein.
Length = 1215
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ679756-1|ABG74697.1| 1178|Homo sapiens intersectin 1 short form
variant 2 protein.
Length = 1178
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 552 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 608
>DQ679755-1|ABG74696.1| 1149|Homo sapiens intersectin 1 short form
variant 7 protein.
Length = 1149
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ679754-1|ABG74695.1| 1144|Homo sapiens intersectin 1 short form
variant 6 protein.
Length = 1144
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ386455-1|ABD72328.1| 1020|Homo sapiens intersectin 1 short form
transcript variant 8 protein.
Length = 1020
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>DQ340865-1|ABC69037.1| 1076|Homo sapiens intersectin 1 short form
protein.
Length = 1076
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 587 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 643
>BX538175-1|CAD98050.1| 627|Homo sapiens hypothetical protein
protein.
Length = 627
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 444 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 500
>BC117560-1|AAI17561.1| 1144|Homo sapiens ITSN1 protein protein.
Length = 1144
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC116186-1|AAI16187.1| 1721|Homo sapiens intersectin 1 (SH3 domain
protein) protein.
Length = 1721
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC116185-1|AAI16186.1| 1716|Homo sapiens ITSN1 protein protein.
Length = 1716
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>BC029611-1|AAH29611.1| 400|Homo sapiens amyotrophic lateral
sclerosis 2 (juvenile) chromosome region, candidate 4
protein.
Length = 400
Score = 29.9 bits (64), Expect = 7.0
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +3
Query: 24 STKILKAGAIEPDTFETSISQALVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYVP 203
STK LK P ++ +ELET+S K + N I+ + +I P
Sbjct: 60 STKELKEHPEAPVQRRQKKTRLPLELETSSTQKKSSSSSLLRNENGIDAEQAEEAVIQKP 119
Query: 204 MPKLKAFQKIQIRLVREL 257
K K Q +++ EL
Sbjct: 120 RRKTKKTQPAELQYANEL 137
>AL121586-7|CAB89415.1| 2442|Homo sapiens centrosomal protein 250kDa
protein.
Length = 2442
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 45 GAIEPDTFETSISQALVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYVPMPKLKAF 224
G I+ + + +A +EL + DLK + +E+ + + EL +S++ ++PM +
Sbjct: 1442 GQIQELEKQREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQERE 1500
Query: 225 QK--IQIRLVRELEK 263
QK +Q +RELEK
Sbjct: 1501 QKLTVQREQIRELEK 1515
>AF114488-1|AAD29953.1| 1220|Homo sapiens intersectin short isoform
protein.
Length = 1220
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF114487-1|AAD29952.1| 1721|Homo sapiens intersectin long isoform
protein.
Length = 1721
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF064244-1|AAC78611.1| 1721|Homo sapiens intersectin long form
protein.
Length = 1721
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF064243-1|AAC78610.1| 1220|Homo sapiens intersectin short form
protein.
Length = 1220
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +3
Query: 93 VELETNSDLKAQLRELYITNAKEI-ELHNKKSIIIYVPMPKLKAFQKIQIRLVRELEKK 266
VE ET S K Q +++ KE+ E+HNK+ + M + QK Q R + ELEK+
Sbjct: 589 VEKETRS--KLQEIDIFNNQLKELREIHNKQQLQKQKSMEAERLKQKEQERKIIELEKQ 645
>AF049105-1|AAC07988.1| 2442|Homo sapiens centrosomal Nek2-associated
protein 1 protein.
Length = 2442
Score = 29.9 bits (64), Expect = 7.0
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +3
Query: 45 GAIEPDTFETSISQALVELETNSDLKAQLRELYITNAKEIELHNKKSIIIYVPMPKLKAF 224
G I+ + + +A +EL + DLK + +E+ + + EL +S++ ++PM +
Sbjct: 1442 GQIQELEKQREMQKAALEL-LSLDLKKRNQEVDLQQEQIQELEKCRSVLEHLPMAVQERE 1500
Query: 225 QK--IQIRLVRELEK 263
QK +Q +RELEK
Sbjct: 1501 QKLTVQREQIRELEK 1515
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,576,593
Number of Sequences: 237096
Number of extensions: 1936838
Number of successful extensions: 4334
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 4083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4328
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6211568660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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