Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N05
(515 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 30 1.1
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 30 1.1
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 30 1.1
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81498-3|CAB04084.3| 260|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 29 1.5
EF445112-1|ABQ01579.1| 265|Caenorhabditis elegans scramblase 4 ... 29 1.5
AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like rec... 29 2.0
AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll (drosoph... 29 2.0
Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical pr... 28 3.4
U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegr... 28 3.4
U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical pr... 28 3.4
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 28 4.6
U97593-5|AAB52880.1| 1175|Caenorhabditis elegans Prion-like-(q/n... 28 4.6
Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical pr... 27 6.0
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = -2
Query: 292 CIGMCMCL--CDCMRVCMGDCVCKCMCIVC 209
C C C C C R C C C C C C
Sbjct: 101 CCRTCCCTRCCTCCRPCCCGCGCGCGCCGC 130
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = -2
Query: 292 CIGMCMCL--CDCMRVCMGDCVCKCMCIVC 209
C C C C C R C C C C C C
Sbjct: 87 CCRTCCCTRCCTCCRPCCCGCGCGCGCCGC 116
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = -2
Query: 292 CIGMCMCL--CDCMRVCMGDCVCKCMCIVC 209
C C C C C R C C C C C C
Sbjct: 90 CCRTCCCTRCCTCCRPCCCGCGCGCGCCGC 119
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = -2
Query: 292 CIGMCMCL--CDCMRVCMGDCVCKCMCIVC 209
C C C C C R C C C C C C
Sbjct: 102 CCRTCCCTRCCTCCRPCCCGCGCGCGCCGC 131
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.9 bits (64), Expect = 1.1
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = -2
Query: 292 CIGMCMCL--CDCMRVCMGDCVCKCMCIVC 209
C C C C C R C C C C C C
Sbjct: 102 CCRTCCCTRCCTCCRPCCCGCGCGCGCCGC 131
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = -2
Query: 292 CIGMCMCL--CDCMRVCMGDCVCKCMCIVC 209
C C C C C R C C C C C C
Sbjct: 103 CCRTCCCTRCCTCCRPCCCGCGCGCGCGCC 132
>Z81498-3|CAB04084.3| 260|Caenorhabditis elegans Hypothetical
protein F11A6.2 protein.
Length = 260
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -2
Query: 382 KHYCGIHC-LVRMGNRGVKVYVICIYLYGNVCIGMCMCLCDCMRVCMGDCV 233
+ +CG V N +K V+ + C G C C C+ C DCV
Sbjct: 73 RRFCGSQRGFVMHINNALKAEVLTVKREFRCCGGCCYGCCACVGCCQHDCV 123
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/30 (40%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Frame = -2
Query: 292 CIGMCMCL--CDCMRVCMGDCVCKCMCIVC 209
C C C C C R C C C C C C
Sbjct: 85 CCRTCCCTRCCTCCRPCCCGCGCGCGCGCC 114
>EF445112-1|ABQ01579.1| 265|Caenorhabditis elegans scramblase 4
protein.
Length = 265
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -2
Query: 382 KHYCGIHC-LVRMGNRGVKVYVICIYLYGNVCIGMCMCLCDCMRVCMGDCV 233
+ +CG V N +K V+ + C G C C C+ C DCV
Sbjct: 73 RRFCGSQRGFVMHINNALKAEVLTVKREFRCCGGCCYGCCACVGCCQHDCV 123
>AF348166-1|AAK37544.1| 1221|Caenorhabditis elegans Toll-like
receptor TOL-1 protein.
Length = 1221
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = -2
Query: 304 YGNVCIGMCMCL----CDCMRVCMGDCVC 230
Y +VC C+C CDC VC +C C
Sbjct: 700 YKSVCEPECICCQYGNCDCKSVCPANCRC 728
>AC006604-2|AAF39752.2| 1221|Caenorhabditis elegans Toll
(drosophila) family protein 1 protein.
Length = 1221
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 4/29 (13%)
Frame = -2
Query: 304 YGNVCIGMCMCL----CDCMRVCMGDCVC 230
Y +VC C+C CDC VC +C C
Sbjct: 700 YKSVCEPECICCQYGNCDCKSVCPANCRC 728
>Z70753-9|CAA94765.1| 502|Caenorhabditis elegans Hypothetical
protein F40F9.10 protein.
Length = 502
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = -2
Query: 271 LCDCMRVCMGDCVCKCMCIVCNVHXSDFRM*VFAIRVLHSPAISKGR 131
L D R DC C + N+H SD V + ++ +SKG+
Sbjct: 426 LTDRHREFAKDCADSCTRFLNNIHLSDLMYSVTVVNMIRYGEVSKGK 472
>U70844-7|AAB09097.1| 686|Caenorhabditis elegans Adam (disintegrin
plus metalloprotease)family protein 4 protein.
Length = 686
Score = 28.3 bits (60), Expect = 3.4
Identities = 11/41 (26%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -2
Query: 307 LYGNVCI-GMCMCLCDCMRVCMGDCVCKCMCIVCNVHXSDF 188
L G C+ G+C+ C+ M + C+C+ + + C + D+
Sbjct: 540 LEGGECLNGVCLPFCEKMSIGKKSCICEDLELSCRLCCRDY 580
>U13646-1|AAC24418.2| 2585|Caenorhabditis elegans Hypothetical protein
ZK783.1 protein.
Length = 2585
Score = 28.3 bits (60), Expect = 3.4
Identities = 17/35 (48%), Positives = 18/35 (51%), Gaps = 8/35 (22%)
Frame = -2
Query: 301 GNVC--IGMC---MCLCDCMRVC---MGDCVCKCM 221
G VC I C M CD M +C MG C CKCM
Sbjct: 1755 GGVCTDIDECDRGMAGCDSMAMCINRMGSCGCKCM 1789
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 112 ADPNAILCPLRSPVNAGLGLQILTYESHSXERYKQYTYIYRHNHPYTRAYNHTNTCTCQY 291
ADP+ P SP A + H+ E+ K +T+ N P+ R+Y + +Y
Sbjct: 103 ADPHTAYRPASSPAPANHPVHAENAREHA-EKSKVFTH--NINEPFGRSYWEASNTVPRY 159
Query: 292 TRYHT 306
R H+
Sbjct: 160 GRSHS 164
>U97593-5|AAB52880.1| 1175|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform a protein.
Length = 1175
Score = 27.9 bits (59), Expect = 4.6
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 112 ADPNAILCPLRSPVNAGLGLQILTYESHSXERYKQYTYIYRHNHPYTRAYNHTNTCTCQY 291
ADP+ P SP A + H+ E+ K +T+ N P+ R+Y + +Y
Sbjct: 222 ADPHTAYRPASSPAPANHPVHAENAREHA-EKSKVFTH--NINEPFGRSYWEASNTVPRY 278
Query: 292 TRYHT 306
R H+
Sbjct: 279 GRSHS 283
>Z69634-3|CAA93454.4| 553|Caenorhabditis elegans Hypothetical
protein B0001.5 protein.
Length = 553
Score = 27.5 bits (58), Expect = 6.0
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +1
Query: 355 RDNGYHSNVWRRSSNADGHVLQQW*VTSE 441
RD H+NVW NA+G + +W V+SE
Sbjct: 120 RDGANHNNVWVVRRNAEG-LNSRWKVSSE 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,751,369
Number of Sequences: 27780
Number of extensions: 252741
Number of successful extensions: 761
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 741
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 996506972
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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