Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N05
(515 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.46
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 23 2.5
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 23 2.5
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 2.5
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 7.5
DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase doma... 21 7.5
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 7.5
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 10.0
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 10.0
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 10.0
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 21 10.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 10.0
AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter... 21 10.0
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 21 10.0
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.0 bits (52), Expect = 0.46
Identities = 9/25 (36%), Positives = 10/25 (40%), Gaps = 4/25 (16%)
Frame = -2
Query: 292 CIGMCMCL----CDCMRVCMGDCVC 230
C +C C CDC C C C
Sbjct: 743 CFALCHCCDFDACDCEMTCPAGCKC 767
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 7/29 (24%)
Frame = -2
Query: 292 CIGMCMCLCD-------CMRVCMGDCVCK 227
C G C C C+++C CVC+
Sbjct: 46 CDGRCQRFCPNVVPKPLCIKICAPGCVCR 74
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 22.6 bits (46), Expect = 2.5
Identities = 9/29 (31%), Positives = 13/29 (44%), Gaps = 7/29 (24%)
Frame = -2
Query: 292 CIGMCMCLCD-------CMRVCMGDCVCK 227
C G C C C+++C CVC+
Sbjct: 46 CDGRCQRFCPNVVPKPLCIKICAPGCVCR 74
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.6 bits (46), Expect = 2.5
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 202 ERYKQYTYIYRHNHPYTRAYNHTNTCTCQYTRYHTNIYKL 321
ER K+ I +N+ + YN+ N Y+TN KL
Sbjct: 74 ERSKE-PKIISNNNSLSNNYNYNNNYNNYNNNYNTNYKKL 112
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 6 RMQKIITNKLQFAIKDIKVL 65
RMQKII N F + ++L
Sbjct: 387 RMQKIINNDFNFNDVNFRIL 406
>DQ067178-1|AAZ20250.1| 448|Apis mellifera conserved ATPase domain
protein protein.
Length = 448
Score = 21.0 bits (42), Expect = 7.5
Identities = 10/34 (29%), Positives = 16/34 (47%)
Frame = -2
Query: 418 GERGHRRYSIVSKHYCGIHCLVRMGNRGVKVYVI 317
G +R S V +C + CL + N G K ++
Sbjct: 384 GSGVYRIGSSVEFDWCAVSCLRELRNLGRKTIMV 417
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.0 bits (42), Expect = 7.5
Identities = 7/20 (35%), Positives = 12/20 (60%)
Frame = +2
Query: 305 QIYTNYINLHPSISHSDETM 364
+IY N+ LH + HS ++
Sbjct: 123 KIYANHCELHRAACHSGSSL 142
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 298 YHTNIYKLHKPSPLYFP 348
Y TN+ H S LY P
Sbjct: 155 YQTNVVVTHNGSCLYVP 171
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/17 (47%), Positives = 9/17 (52%)
Frame = +1
Query: 298 YHTNIYKLHKPSPLYFP 348
Y TN+ H S LY P
Sbjct: 155 YQTNVVVTHNGSCLYVP 171
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +1
Query: 136 PLRSPVNAGLGLQIL 180
PL PVNA +GL +L
Sbjct: 217 PLGCPVNAIMGLFVL 231
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +2
Query: 2 HEDAEDNYKQITVCNKRYKSFDDYQSP 82
H D+ K + + N+ Y +FD P
Sbjct: 427 HTDSSGAMKIVNMLNQLYTAFDVLTDP 453
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = +3
Query: 6 RMQKIITNKLQFAIKDIKVL 65
RMQKI+ N F + ++L
Sbjct: 385 RMQKIVNNDFNFDEVNFRIL 404
>AF144379-1|AAD34586.1| 543|Apis mellifera glutamate transporter
Am-EAAT protein.
Length = 543
Score = 20.6 bits (41), Expect = 10.0
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 170 NPSPAFTGDLKGQSIALGSAS 108
NP+ F G ++ ALG+AS
Sbjct: 342 NPAAFFRGMMQAWMTALGTAS 362
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 20.6 bits (41), Expect = 10.0
Identities = 8/27 (29%), Positives = 13/27 (48%)
Frame = +2
Query: 2 HEDAEDNYKQITVCNKRYKSFDDYQSP 82
H D+ K + + N+ Y +FD P
Sbjct: 427 HTDSSGAVKIVNMLNQLYTAFDVLTDP 453
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,743
Number of Sequences: 438
Number of extensions: 3512
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14354847
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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