Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N04
(607 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like pr... 44 6e-05
U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like pr... 37 0.010
U40797-5|AAB37548.1| 402|Caenorhabditis elegans Saposin-like pr... 33 0.16
U40797-3|AAB37550.2| 238|Caenorhabditis elegans Saposin-like pr... 33 0.21
AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical ... 30 1.1
AC024756-1|AAT39979.1| 104|Caenorhabditis elegans Saposin-like ... 29 2.6
Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical pr... 29 3.4
U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical p... 29 3.4
U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical pr... 29 3.4
AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like ... 28 5.9
AC006632-4|AAK85475.1| 374|Caenorhabditis elegans Hypothetical ... 28 5.9
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 27 7.9
>U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like
protein family protein10, isoform b protein.
Length = 429
Score = 44.4 bits (100), Expect = 6e-05
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Frame = +1
Query: 214 CSFCQYFLHYLQVELSDSRVEAKVTAAVNAACGVLPASVNAECKEFVDQYGPAVIALLVQ 393
C C++ + +Q ++ +R + A ++ A++ C +F+D Y P VI + V+
Sbjct: 262 CFECKFVVEDMQTDMITNRKKLSDDVRDFACYKIVTANMTDSCIDFLDLYLPTVIQMTVE 321
Query: 394 EIDPSSVCPAIGICP--QVEEVKHVTINS-D*SNCPLCLFAVEQLEATLKNNRTEANIRK 564
+ P VC A CP V ++ T CP + +LE L +N + + K
Sbjct: 322 QATPQGVCLANKCCPASSVAPLRDFTFQEIQAEKCPKMM----ELETYLSSNLVGSAMEK 377
Query: 565 ALEGLCT 585
E T
Sbjct: 378 FFENSLT 384
Score = 32.7 bits (71), Expect = 0.21
Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 13/157 (8%)
Frame = +1
Query: 166 LPIERMFVSVPQNKVVCSFCQYFLHYLQVELSDSRVEAKVTAAVNAACGVLPASVNAECK 345
L R+ V +N C C+ + + D + ++ + C S EC+
Sbjct: 23 LDTNRVQAEVIENSS-CEECENVIKRISEAAKDPKKIEELKIVLGMMCR--ETSYADECR 79
Query: 346 EFVDQYGPAVIALLVQEIDPSSVCPAIGIC--PQVEEVKHV----------TINSD*SNC 489
FV Q + L +P +VC + IC +++ + + T ++ C
Sbjct: 80 LFVSQLDKFIDKLQPFLKNPHAVCTRLHICSNKKIDSFRRILLEFAKRAQKTFDAPAIVC 139
Query: 490 PLCLFAVEQLEATLKNNRTEANIRKAL-EGLCTHLSQ 597
C F V++L+ +++ +++A R L E +C L Q
Sbjct: 140 DECQFVVKELKTVVEDKKSQAEARDFLRENVCKSLGQ 176
>U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like
protein family protein3 protein.
Length = 100
Score = 37.1 bits (82), Expect = 0.010
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 3/97 (3%)
Frame = +1
Query: 154 IVPALPIERMFVSVPQNKVVCSFCQYFLHYLQVELSDSRVEAKVTAAVNAACGVLPASV- 330
++ A+ + F S N + C C+ + + L + K AV+A C S+
Sbjct: 6 LLAAVTLAVFFSSTEANGIECEMCKMSVKIVVPMLGEDTESIK--KAVDAECKKEFHSIP 63
Query: 331 --NAECKEFVDQYGPAVIALLVQEIDPSSVCPAIGIC 435
ECK+F+D +I L PS VC +G+C
Sbjct: 64 FGTQECKKFIDTKLDPIIHELENGTAPSDVCTKLGMC 100
>U40797-5|AAB37548.1| 402|Caenorhabditis elegans Saposin-like
protein family protein8 protein.
Length = 402
Score = 33.1 bits (72), Expect = 0.16
Identities = 34/132 (25%), Positives = 49/132 (37%), Gaps = 2/132 (1%)
Frame = +1
Query: 214 CSFCQYFLHYLQVELSDSRVEAKVTAAVNAACGVLPASVNAECKEFVDQYGPAVIALLVQ 393
C C L E D R + AC + A+ C +FV Y V+ L
Sbjct: 240 CFECTLSADALLQEFIDKR-QGTADDIQTVACNKMVANWTDGCNDFVHMYMSTVLFLTYN 298
Query: 394 EIDPSSVCPAIGICPQVEE--VKHVTINSD*SNCPLCLFAVEQLEATLKNNRTEANIRKA 567
+ D +C + C + E V+ C C AVE A EA A
Sbjct: 299 QFDGRGICTMMHSCEKKENALVEMAMSEKVMLGCENCK-AVEHFFA----QNQEALHSHA 353
Query: 568 LEGLCTHLSQKL 603
++GL +++ QKL
Sbjct: 354 VDGLYSNVCQKL 365
>U40797-3|AAB37550.2| 238|Caenorhabditis elegans Saposin-like
protein family protein10, isoform a protein.
Length = 238
Score = 32.7 bits (71), Expect = 0.21
Identities = 33/157 (21%), Positives = 64/157 (40%), Gaps = 13/157 (8%)
Frame = +1
Query: 166 LPIERMFVSVPQNKVVCSFCQYFLHYLQVELSDSRVEAKVTAAVNAACGVLPASVNAECK 345
L R+ V +N C C+ + + D + ++ + C S EC+
Sbjct: 23 LDTNRVQAEVIENSS-CEECENVIKRISEAAKDPKKIEELKIVLGMMCR--ETSYADECR 79
Query: 346 EFVDQYGPAVIALLVQEIDPSSVCPAIGIC--PQVEEVKHV----------TINSD*SNC 489
FV Q + L +P +VC + IC +++ + + T ++ C
Sbjct: 80 LFVSQLDKFIDKLQPFLKNPHAVCTRLHICSNKKIDSFRRILLEFAKRAQKTFDAPAIVC 139
Query: 490 PLCLFAVEQLEATLKNNRTEANIRKAL-EGLCTHLSQ 597
C F V++L+ +++ +++A R L E +C L Q
Sbjct: 140 DECQFVVKELKTVVEDKKSQAEARDFLRENVCKSLGQ 176
>AF016682-3|AAB66186.2| 308|Caenorhabditis elegans Hypothetical
protein T07D3.6 protein.
Length = 308
Score = 30.3 bits (65), Expect = 1.1
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +1
Query: 307 CGVLPASVNAECKEFVDQYGPAVIALLVQEIDPSS 411
C ++P + + + FV+ Y P+ + LL + +PSS
Sbjct: 252 CSIIPHTTDMDLMVFVEDYNPSYVELLQRPRNPSS 286
>AC024756-1|AAT39979.1| 104|Caenorhabditis elegans Saposin-like
protein family protein23 protein.
Length = 104
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/87 (22%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +1
Query: 184 FVSVP-QNKVVCSFCQYFLHYLQVEL--SDSRVEAKVTAAVNAACGVLPASVNAECKEFV 354
FV+ P Q + C C + L+ ++ V K AA+ PA+ +C+++
Sbjct: 19 FVAPPSQATLACITCVATVKGLEPKVLAEGDAVAEKEVAALCMKEAPTPAA-EKDCEQYG 77
Query: 355 DQYGPAVIALLVQEIDPSSVCPAIGIC 435
D+ +I L+ +++ P ++C + C
Sbjct: 78 DEEAAIIIDLIKKDVPPKTICQELKKC 104
>Z66567-4|CAA91493.2| 618|Caenorhabditis elegans Hypothetical
protein ZK455.4 protein.
Length = 618
Score = 28.7 bits (61), Expect = 3.4
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 484 NCPLCLFAVEQLEATLKNNRTEANIRKALEGLC 582
+C C FAV+ ++A + N T+ I L LC
Sbjct: 71 SCLFCTFAVDGVQALIAQNSTDNEIAAFLVNLC 103
>U41279-10|AAK31426.2| 308|Caenorhabditis elegans Hypothetical
protein C17C3.12a protein.
Length = 308
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 468 NRDVFHFLHLWANADGWANARGVDLLDEERDHRGPVL--IDELLAFRVHTRRQ 316
N + F + ANAD RGV +RDH G VL D+ L R T Q
Sbjct: 189 NAPIADFFLVLANADPEKGYRGVTCFIVDRDHEGVVLGEQDDNLGMRAGTIAQ 241
>U41279-9|AAL02437.1| 220|Caenorhabditis elegans Hypothetical
protein C17C3.12c protein.
Length = 220
Score = 28.7 bits (61), Expect = 3.4
Identities = 20/53 (37%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = -2
Query: 468 NRDVFHFLHLWANADGWANARGVDLLDEERDHRGPVL--IDELLAFRVHTRRQ 316
N + F + ANAD RGV +RDH G VL D+ L R T Q
Sbjct: 23 NAPIADFFLVLANADPEKGYRGVTCFIVDRDHEGVVLGEQDDNLGMRAGTIAQ 75
>AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like
protein family protein7 protein.
Length = 318
Score = 27.9 bits (59), Expect = 5.9
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +1
Query: 307 CGVLPASVNAECKEFVDQYGPAVIALLVQEIDPSSVCPAIGICPQ 441
C VLP+ +C FV+ P + + +I VC + C +
Sbjct: 77 CRVLPSVFKEQCFAFVETSLPEIYYSINYDISSKDVCVRMNFCDE 121
>AC006632-4|AAK85475.1| 374|Caenorhabditis elegans Hypothetical
protein F28A10.9 protein.
Length = 374
Score = 27.9 bits (59), Expect = 5.9
Identities = 11/36 (30%), Positives = 20/36 (55%)
Frame = +1
Query: 307 CGVLPASVNAECKEFVDQYGPAVIALLVQEIDPSSV 414
C V+P + + + F ++Y P + LL +PSS+
Sbjct: 189 CSVIPHTTDMDISIFANEYNPDYVKLLQSYWNPSSL 224
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 27.5 bits (58), Expect = 7.9
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = -3
Query: 449 SSTCGQMPMAGQTLEGSISWTRSA 378
+ T Q+ +A QTLEG I W RS+
Sbjct: 1061 AQTTSQLMVALQTLEGMIMWERSS 1084
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,722,118
Number of Sequences: 27780
Number of extensions: 240347
Number of successful extensions: 756
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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