Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N03
(583 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 159 1e-39
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 159 1e-39
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 159 2e-39
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 159 2e-39
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 159 2e-39
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 158 2e-39
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 112 2e-25
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 112 2e-25
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 69 2e-12
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 66 2e-11
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 65 3e-11
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 65 3e-11
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 65 3e-11
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 65 3e-11
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 65 3e-11
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 65 4e-11
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 64 7e-11
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 64 7e-11
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 64 7e-11
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 64 7e-11
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 64 7e-11
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 62 3e-10
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 60 9e-10
AF024491-2|AAT92081.1| 765|Caenorhabditis elegans Hypothetical ... 29 1.8
AF024491-1|AAB70312.2| 850|Caenorhabditis elegans Hypothetical ... 29 1.8
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 28 4.2
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 28 4.2
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 28 4.2
AF039048-1|AAB94237.2| 480|Caenorhabditis elegans Cell division... 28 5.6
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 27 7.4
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 27 7.4
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 27 7.4
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 27 9.7
AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical ... 27 9.7
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ... 27 9.7
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 159 bits (386), Expect = 1e-39
Identities = 72/74 (97%), Positives = 74/74 (100%)
Frame = +3
Query: 9 AVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 188
AVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 ESNMNDLVSEYQQY 230
ESNMNDL+SEYQQY
Sbjct: 412 ESNMNDLISEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 159 bits (386), Expect = 1e-39
Identities = 72/74 (97%), Positives = 74/74 (100%)
Frame = +3
Query: 9 AVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 188
AVCDIPPRGLKMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGLKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 ESNMNDLVSEYQQY 230
ESNMNDL+SEYQQY
Sbjct: 412 ESNMNDLISEYQQY 425
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 159 bits (385), Expect = 2e-39
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = +3
Query: 9 AVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 188
AVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 ESNMNDLVSEYQQY 230
ESNMNDLVSEYQQY
Sbjct: 412 ESNMNDLVSEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 159 bits (385), Expect = 2e-39
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = +3
Query: 9 AVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 188
AVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 ESNMNDLVSEYQQY 230
ESNMNDLVSEYQQY
Sbjct: 412 ESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 159 bits (385), Expect = 2e-39
Identities = 73/74 (98%), Positives = 74/74 (100%)
Frame = +3
Query: 9 AVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 188
AVCDIPPRGLKM+ATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGLKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 ESNMNDLVSEYQQY 230
ESNMNDLVSEYQQY
Sbjct: 412 ESNMNDLVSEYQQY 425
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 158 bits (384), Expect = 2e-39
Identities = 72/74 (97%), Positives = 74/74 (100%)
Frame = +3
Query: 9 AVCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 188
AVCDIPPRG+KMAATF+GNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA
Sbjct: 352 AVCDIPPRGVKMAATFVGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEA 411
Query: 189 ESNMNDLVSEYQQY 230
ESNMNDLVSEYQQY
Sbjct: 412 ESNMNDLVSEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 112 bits (269), Expect = 2e-25
Identities = 52/73 (71%), Positives = 61/73 (83%)
Frame = +3
Query: 12 VCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 191
VCDIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+AE
Sbjct: 351 VCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAE 407
Query: 192 SNMNDLVSEYQQY 230
+ +NDL+SE+QQY
Sbjct: 408 NKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 112 bits (269), Expect = 2e-25
Identities = 52/73 (71%), Positives = 61/73 (83%)
Frame = +3
Query: 12 VCDIPPRGLKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAE 191
VCDIP RGLK +ATFI NSTAIQE KRIS+QF +FRRKAFLHWYT M+E EFT+AE
Sbjct: 351 VCDIPSRGLKTSATFIANSTAIQEPLKRISKQFAGLFRRKAFLHWYT---MEESEFTDAE 407
Query: 192 SNMNDLVSEYQQY 230
+ +NDL+SE+QQY
Sbjct: 408 NKVNDLISEFQQY 420
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 69.3 bits (162), Expect = 2e-12
Identities = 28/64 (43%), Positives = 44/64 (68%)
Frame = +3
Query: 36 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 215
L+ A + N+TAIQE + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L
Sbjct: 371 LQRAVCMLSNTTAIQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEK 430
Query: 216 EYQQ 227
+Y++
Sbjct: 431 DYEE 434
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 65.7 bits (153), Expect = 2e-11
Identities = 26/64 (40%), Positives = 43/64 (67%)
Frame = +3
Query: 36 LKMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS 215
L+ A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L
Sbjct: 376 LQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEK 435
Query: 216 EYQQ 227
+Y++
Sbjct: 436 DYEE 439
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y+
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYE 431
Query: 225 Q 227
+
Sbjct: 432 E 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y+
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYE 431
Query: 225 Q 227
+
Sbjct: 432 E 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y+
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYE 431
Query: 225 Q 227
+
Sbjct: 432 E 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y+
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYE 431
Query: 225 Q 227
+
Sbjct: 432 E 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y+
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYE 431
Query: 225 Q 227
+
Sbjct: 432 E 432
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 65.3 bits (152), Expect = 3e-11
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y+
Sbjct: 372 AVCMLSNTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYE 431
Query: 225 Q 227
+
Sbjct: 432 E 432
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 64.9 bits (151), Expect = 4e-11
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +3
Query: 57 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 227
I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 384 ISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 64.9 bits (151), Expect = 4e-11
Identities = 26/57 (45%), Positives = 40/57 (70%)
Frame = +3
Query: 57 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 227
I N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 356 ISNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 64.1 bits (149), Expect = 7e-11
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E ++R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 369 AVCMLSNTTAIAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 428
Query: 225 Q 227
+
Sbjct: 429 E 429
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 64.1 bits (149), Expect = 7e-11
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 225 Q 227
+
Sbjct: 434 E 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 64.1 bits (149), Expect = 7e-11
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 373 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 432
Query: 225 Q 227
+
Sbjct: 433 E 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 64.1 bits (149), Expect = 7e-11
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 225 Q 227
+
Sbjct: 434 E 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 64.1 bits (149), Expect = 7e-11
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y+
Sbjct: 374 AVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYE 433
Query: 225 Q 227
+
Sbjct: 434 E 434
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 62.1 bits (144), Expect = 3e-10
Identities = 24/57 (42%), Positives = 40/57 (70%)
Frame = +3
Query: 57 IGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 227
+ ++TAI E + R+ +F M+ ++AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 60.5 bits (140), Expect = 9e-10
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +3
Query: 45 AATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQ 224
A + N+TAI E + R+ +F M+ ++AF+HW+ GEGM+E EF EA ++ L +Y
Sbjct: 377 AVCMLSNTTAIAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYA 436
Query: 225 Q 227
+
Sbjct: 437 E 437
>AF024491-2|AAT92081.1| 765|Caenorhabditis elegans Hypothetical
protein C24A1.3b protein.
Length = 765
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 540 KHPGVSPSFHKEKQHGNVNATCYH 469
K+PGV P++ + H +++ CYH
Sbjct: 343 KYPGVDPNYQGQDGHTALHSACYH 366
>AF024491-1|AAB70312.2| 850|Caenorhabditis elegans Hypothetical
protein C24A1.3a protein.
Length = 850
Score = 29.5 bits (63), Expect = 1.8
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = -2
Query: 540 KHPGVSPSFHKEKQHGNVNATCYH 469
K+PGV P++ + H +++ CYH
Sbjct: 343 KYPGVDPNYQGQDGHTALHSACYH 366
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +3
Query: 15 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 170
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 171 MEFTEAESNMNDLVSEY 221
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +3
Query: 15 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 170
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 171 MEFTEAESNMNDLVSEY 221
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 28.3 bits (60), Expect = 4.2
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 8/77 (10%)
Frame = +3
Query: 15 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRKAFLHWYT--GEGMDE 170
C I PR + T I N T +QEL K I E+ R+ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 171 MEFTEAESNMNDLVSEY 221
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>AF039048-1|AAB94237.2| 480|Caenorhabditis elegans Cell division
cycle related protein25.2 protein.
Length = 480
Score = 27.9 bits (59), Expect = 5.6
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = +2
Query: 320 CS*PSPNPHTHPATC 364
CS +P+PH HP TC
Sbjct: 462 CSRETPSPHKHPLTC 476
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -1
Query: 127 RLNIAVNCSEMRLNSSWMAVELPMKVAAIFSPR 29
R N N ++++ S+ ++VE+P K+A +P+
Sbjct: 117 RTNTVDNLEKIKIESNGVSVEIPFKIARYTAPK 149
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 39 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 209
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 210 VSEYQ 224
+ EY+
Sbjct: 428 LDEYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 27.5 bits (58), Expect = 7.4
Identities = 15/65 (23%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +3
Query: 39 KMAATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN---DL 209
K++ + NST++ LF+ + ++ + ++AF+ + E +D + M+ DL
Sbjct: 370 KVSGLLLNNSTSVAPLFESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDL 427
Query: 210 VSEYQ 224
+ EY+
Sbjct: 428 LDEYK 432
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 27.1 bits (57), Expect = 9.7
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 537 HPGVSPSFHKEKQHG 493
HPG+ P++H +QHG
Sbjct: 473 HPGMDPNYHYYQQHG 487
>AL110501-2|CAE47474.1| 1271|Caenorhabditis elegans Hypothetical
protein Y79H2A.3b protein.
Length = 1271
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 513 HKEKQHGNVNATCYHNIDAYSLTYIHKNTFTSVESFMSK 397
++EK + ATCY D Y L H N+ + ++M +
Sbjct: 89 NQEKTNFWTCATCYEVGDTYELADAHLNSMDHIRNYMDE 127
>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
protein Y79H2A.3a protein.
Length = 2129
Score = 27.1 bits (57), Expect = 9.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 513 HKEKQHGNVNATCYHNIDAYSLTYIHKNTFTSVESFMSK 397
++EK + ATCY D Y L H N+ + ++M +
Sbjct: 89 NQEKTNFWTCATCYEVGDTYELADAHLNSMDHIRNYMDE 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,763,312
Number of Sequences: 27780
Number of extensions: 185693
Number of successful extensions: 506
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 504
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1215936170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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