Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_N02
(575 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821 242 1e-64
09_04_0548 - 18469636-18470037,18471164-18472705,18474052-184744... 242 1e-64
09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540 242 1e-64
08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201 242 2e-64
04_01_0042 + 473912-474058,474208-474349,474442-476264 241 3e-64
06_03_1404 - 29928792-29929040,29929147-29929551,29930130-299302... 165 3e-41
08_02_1073 - 24117834-24118037,24118122-24118211,24118299-241184... 149 2e-36
09_04_0497 - 18096299-18096496,18096586-18096675,18096809-180969... 148 3e-36
12_02_0522 - 19960092-19960595,19962737-19962880,19963042-199631... 143 8e-35
09_06_0076 + 20710482-20710670,20711313-20711547,20711664-207116... 86 2e-17
06_03_0499 + 21461608-21463427,21463517-21463627,21463867-214641... 29 3.5
03_06_0510 + 34423528-34424046,34424132-34425025 29 3.5
01_01_0980 + 7754841-7754971,7757048-7757330,7757435-7757640,775... 27 8.1
01_01_0409 - 3084821-3084988,3085069-3085155,3085270-3085476,308... 27 8.1
>09_04_0550 - 18481095-18481496,18482623-18483898,18485769-18485821
Length = 576
Score = 242 bits (593), Expect = 1e-64
Identities = 112/188 (59%), Positives = 141/188 (75%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
K+YE F KNLKLGIHEDS NR+K+++LLRYH++ SGDE SLK+YV+RMKE Q IYYIT
Sbjct: 155 KFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYIT 214
Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
GE++ V NS F+E++KK+GYEV+YM + IDEY V Q+KE++GK LVS T
Sbjct: 215 GESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE 274
Query: 370 XXXXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
GLCKV+K +L KVEKVVVS+R+V+SPCC+VT +YGW+ANMERIMK
Sbjct: 275 DEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMK 334
Query: 550 AQALRDTS 573
AQALRD+S
Sbjct: 335 AQALRDSS 342
>09_04_0548 -
18469636-18470037,18471164-18472705,18474052-18474474,
18474874-18474999
Length = 830
Score = 242 bits (593), Expect = 1e-64
Identities = 112/188 (59%), Positives = 141/188 (75%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
K+YE F KNLKLGIHEDS NR+K+++LLRYH++ SGDE SLK+YV+RMKE Q IYYIT
Sbjct: 409 KFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYIT 468
Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
GE++ V NS F+E++KK+GYEV+YM + IDEY V Q+KE++GK LVS T
Sbjct: 469 GESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE 528
Query: 370 XXXXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
GLCKV+K +L KVEKVVVS+R+V+SPCC+VT +YGW+ANMERIMK
Sbjct: 529 DEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMK 588
Query: 550 AQALRDTS 573
AQALRD+S
Sbjct: 589 AQALRDSS 596
>09_04_0546 - 18460309-18461859,18462593-18463015,18463415-18463540
Length = 699
Score = 242 bits (593), Expect = 1e-64
Identities = 112/188 (59%), Positives = 141/188 (75%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
K+YE F KNLKLGIHEDS NR+K+++LLRYH++ SGDE SLK+YV+RMKE Q IYYIT
Sbjct: 409 KFYEAFSKNLKLGIHEDSTNRTKIAELLRYHSTKSGDELTSLKDYVTRMKEGQSEIYYIT 468
Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
GE++ V NS F+E++KK+GYEV+YM + IDEY V Q+KE++GK LVS T
Sbjct: 469 GESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE 528
Query: 370 XXXXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
GLCKV+K +L KVEKVVVS+R+V+SPCC+VT +YGW+ANMERIMK
Sbjct: 529 DEKKRQEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMK 588
Query: 550 AQALRDTS 573
AQALRD+S
Sbjct: 589 AQALRDSS 596
>08_02_1151 - 24712200-24713750,24714587-24715009,24716076-24716201
Length = 699
Score = 242 bits (592), Expect = 2e-64
Identities = 112/188 (59%), Positives = 141/188 (75%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
K+YE F KNLKLGIHEDS NR+K+++LLRYH++ SGDE SLK+YV+RMKE Q IYYIT
Sbjct: 409 KFYEAFSKNLKLGIHEDSTNRNKIAELLRYHSTKSGDELTSLKDYVTRMKEGQNDIYYIT 468
Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
GE++ V NS F+E++KK+GYEV+YM + IDEY V Q+KE++GK LVS T
Sbjct: 469 GESKKAVENSPFLEKLKKKGYEVLYMVDAIDEYAVGQLKEFEGKKLVSATKEGLKLDESE 528
Query: 370 XXXXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
GLCKV+K +L KVEKVVVS+R+V+SPCC+VT +YGW+ANMERIMK
Sbjct: 529 DEKKRKEELKEKFEGLCKVIKEVLGDKVEKVVVSDRVVDSPCCLVTGEYGWTANMERIMK 588
Query: 550 AQALRDTS 573
AQALRD+S
Sbjct: 589 AQALRDSS 596
>04_01_0042 + 473912-474058,474208-474349,474442-476264
Length = 703
Score = 241 bits (590), Expect = 3e-64
Identities = 115/188 (61%), Positives = 142/188 (75%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
K+YE F KNLKLGIHEDSQNR KL+DLLRYH++ SG+E SLK+YV+RMKE QK +YYIT
Sbjct: 414 KFYEAFSKNLKLGIHEDSQNRGKLADLLRYHSTKSGNELTSLKDYVTRMKEGQKEVYYIT 473
Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
GE+R V NS F+E++KK+GYEV++M + IDEY V Q+KEYDGK LVS T
Sbjct: 474 GESRKAVENSPFLEKLKKKGYEVLFMVDAIDEYAVGQLKEYDGKKLVSAT----KEGLKL 529
Query: 370 XXXXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
LCKV+K+IL +VEKVVVS+R+V+SPCC+VT +YGW+ANMERIMK
Sbjct: 530 DDDDDAKERKRSFEPLCKVIKDILGDRVEKVVVSDRIVDSPCCLVTGEYGWTANMERIMK 589
Query: 550 AQALRDTS 573
AQALRD+S
Sbjct: 590 AQALRDSS 597
>06_03_1404 - 29928792-29929040,29929147-29929551,29930130-29930280,
29930363-29930501,29930578-29930743,29930826-29931041,
29931142-29931323,29931412-29931538,29931974-29932112,
29932227-29932353,29932501-29932612,29932704-29932784,
29933330-29933483,29933569-29933689,29934003-29934045,
29934356-29934460
Length = 838
Score = 165 bits (400), Expect = 3e-41
Identities = 79/189 (41%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
K++ +FGK++KLGI ED+ NR++L+ LLR+ ++ S + SL EY+SRMK QK I+YIT
Sbjct: 540 KFWNEFGKSVKLGIIEDATNRNRLAKLLRFESTKSEGKLASLDEYISRMKPGQKDIFYIT 599
Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
G +++Q+ S F+ER+ K+ YEV+Y T+P+DEY++Q + +Y+ K +V+
Sbjct: 600 GSSKEQLEKSPFLERLTKKNYEVIYFTDPVDEYLMQYLMDYEDKKFQNVSKEGLKLGKDS 659
Query: 370 XXXXXXXXXXXXXXGLCKVMKNILD-KKVEKVVVSNRLVESPCCIVTAQYGWSANMERIM 546
L K LD + V+ V +SNRL ++PC +VT++YGWSANME+IM
Sbjct: 660 KLKDLKESFKE----LTDWWKKALDTESVDSVKISNRLSDTPCVVVTSKYGWSANMEKIM 715
Query: 547 KAQALRDTS 573
++Q L D S
Sbjct: 716 QSQTLSDAS 724
>08_02_1073 - 24117834-24118037,24118122-24118211,24118299-24118404,
24118477-24118648,24118737-24118839,24118927-24119181,
24119259-24119336,24119449-24119541,24119660-24119800,
24119882-24119986,24120135-24120212,24120297-24120341,
24120463-24120579,24120685-24120828,24120934-24121017,
24121139-24121232,24121322-24121447,24121585-24121658,
24121870-24122098,24123124-24123611,24123702-24123749,
24123841-24124077,24124368-24124404,24125011-24125018
Length = 1051
Score = 149 bits (360), Expect = 2e-36
Identities = 76/188 (40%), Positives = 108/188 (57%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
K++E FGK +KLG ED+ N +L+ LLR+HTS + + SL +YV M ENQK IYYI
Sbjct: 746 KFWESFGKFIKLGCIEDTGNHKRLAPLLRFHTSKNEGDLISLDQYVENMPENQKAIYYIA 805
Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
++ + F+E++ ++ EV+Y+ EPIDE +Q ++ Y K V ++
Sbjct: 806 TDSLQSAKTAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDISKEDLELGDED 865
Query: 370 XXXXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
LC +K L KV KV +S RL SPC +V+ ++GWSANMER+MK
Sbjct: 866 EDNKESKQEYTL---LCDWVKQQLGDKVAKVQISKRLSLSPCVLVSGKFGWSANMERLMK 922
Query: 550 AQALRDTS 573
AQ L DTS
Sbjct: 923 AQTLGDTS 930
>09_04_0497 - 18096299-18096496,18096586-18096675,18096809-18096914,
18097005-18097179,18097263-18097365,18097458-18097712,
18097791-18097868,18097986-18098078,18098179-18098319,
18098406-18098510,18098658-18098738,18098825-18098866,
18098966-18099082,18099208-18099351,18099485-18099568,
18099683-18099803,18099863-18099988,18100106-18100179,
18100388-18100657
Length = 800
Score = 148 bits (359), Expect = 3e-36
Identities = 75/188 (39%), Positives = 109/188 (57%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
K++E FGK +KLG ED+ N +L+ LLR+++S + + SL +YV M ENQK IYYI
Sbjct: 496 KFWESFGKFVKLGCIEDTGNHKRLAPLLRFYSSKNETDLISLDQYVENMPENQKAIYYIA 555
Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
++ + F+E++ ++ EV+Y+ EPIDE +Q ++ Y K V ++
Sbjct: 556 TDSLQSAKTAPFLEKLVQKDIEVLYLIEPIDEVAIQNLQTYKEKKFVDISKEDLELGDED 615
Query: 370 XXXXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
LC +K L KV KV +SNRL SPC +V+ ++GWSANMER+MK
Sbjct: 616 EDKENESKQEYTL--LCDWIKQQLGDKVAKVQISNRLSSSPCVLVSGKFGWSANMERLMK 673
Query: 550 AQALRDTS 573
AQ L DTS
Sbjct: 674 AQTLGDTS 681
>12_02_0522 - 19960092-19960595,19962737-19962880,19963042-19963131,
19963215-19963320,19963400-19963574,19963849-19963951,
19964382-19964636,19964726-19964803,19964908-19965000,
19965091-19965222,19965898-19966002,19966127-19966201,
19966284-19966340,19966419-19966532,19966613-19966756,
19966886-19966969,19967071-19967164,19967244-19967369,
19967507-19967580,19967672-19967875,19968234-19968388,
19968860-19968947,19969505-19969730,19970235-19970286,
19970766-19970958,19973221-19973314,19973744-19973788,
19974874-19974896
Length = 1210
Score = 143 bits (347), Expect = 8e-35
Identities = 69/188 (36%), Positives = 108/188 (57%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
+++E +GK LKLG ED +N +++ LLR+ +S S +E SL EYV MK QK IYYI
Sbjct: 756 RFWENYGKFLKLGCMEDKENHKRIAPLLRFFSSQSNEELISLDEYVENMKPEQKDIYYIA 815
Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
++ ++ F+E++ ++ YEV+++ +P+DE V + Y K V ++
Sbjct: 816 ADSLSSAKHAPFLEKLNEKEYEVLFLVDPMDEVSVTNLNSYKDKRFVDISKEDLDLGDKN 875
Query: 370 XXXXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
C +K L +KV +V +SNRL SPC +V A++GWSANMER+M+
Sbjct: 876 EEKEKEIKQEYSQT--CDWIKKRLGEKVARVDISNRLSSSPCVLVAAKFGWSANMERLMR 933
Query: 550 AQALRDTS 573
AQ++ D S
Sbjct: 934 AQSMGDMS 941
>09_06_0076 + 20710482-20710670,20711313-20711547,20711664-20711689,
20712000-20712293,20712603-20712728,20712827-20712896,
20712992-20713182,20713394-20713519,20713878-20714279,
20714364-20714758,20714861-20715315,20715403-20715524,
20715653-20715693,20716026-20716129,20716363-20716576,
20717667-20717780,20718576-20718612
Length = 1046
Score = 86.2 bits (204), Expect = 2e-17
Identities = 51/124 (41%), Positives = 68/124 (54%)
Frame = +1
Query: 196 NRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXXXX 375
++ V NS F+E++K YEV+YM + IDEY V Q E++GK L+S T
Sbjct: 685 SKKAVENSPFLEKLKD--YEVLYMVDAIDEYAVGQFMEFEGKKLISATKGLKLDEKFD-- 740
Query: 376 XXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMKAQ 555
L VMK +L VE+ V S+R+V+S CC VT +Y W ANMERIMK
Sbjct: 741 ------------NLSIVMKEVLVDTVERDVFSDRVVDSSCCPVTGEYSWVANMERIMKEN 788
Query: 556 ALRD 567
A+ D
Sbjct: 789 AIMD 792
Score = 48.4 bits (110), Expect = 4e-06
Identities = 22/45 (48%), Positives = 30/45 (66%)
Frame = +1
Query: 10 KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEY 144
K+Y+ F KNLKLGIHEDS NR+K+++LL + LK+Y
Sbjct: 657 KFYKAFSKNLKLGIHEDSTNRTKIAELLSKKAVENSPFLEKLKDY 701
>06_03_0499 +
21461608-21463427,21463517-21463627,21463867-21464143,
21464265-21464353,21464508-21464595,21464698-21464907,
21464985-21465110,21465429-21465620,21466532-21467188
Length = 1189
Score = 28.7 bits (61), Expect = 3.5
Identities = 17/84 (20%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = +1
Query: 85 DLLRYHTSASGDEACS-LKEYVSRMKENQKHIYYITGENRDQVANSSFVERVKKRGYEVV 261
DL+ +A D+ S + + + R+ + I+ +TG+ + N + + ++G +
Sbjct: 720 DLILVGATAVEDKLQSGVPQCIDRLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMRRI 779
Query: 262 YMTEPIDEYVVQQMKEYDGKTLVS 333
++ P D+ V Q + ++L+S
Sbjct: 780 CLSIPTDDQVAQDANKAAKESLMS 803
>03_06_0510 + 34423528-34424046,34424132-34425025
Length = 470
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 202 DQVANSSFVERVKKRGYEVV---YMTEPIDEYVVQQMKEYDG 318
DQ+ N+ +VE V K G+EVV ++E + + M E DG
Sbjct: 391 DQMGNARYVEHVWKAGFEVVGGELERGAVEEAIRRLMAESDG 432
>01_01_0980 +
7754841-7754971,7757048-7757330,7757435-7757640,
7757687-7757879,7758912-7759104,7759555-7759589
Length = 346
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/19 (57%), Positives = 11/19 (57%), Gaps = 1/19 (5%)
Frame = +3
Query: 498 HRHCAVWL-VC*HGAHHEG 551
H H WL VC HG HH G
Sbjct: 305 HHHGHTWLRVCLHGGHHGG 323
>01_01_0409 -
3084821-3084988,3085069-3085155,3085270-3085476,
3085904-3085985,3086085-3086275,3086410-3086616,
3086709-3086871,3087905-3087960,3088035-3088148,
3088599-3089807
Length = 827
Score = 27.5 bits (58), Expect = 8.1
Identities = 18/50 (36%), Positives = 21/50 (42%)
Frame = -2
Query: 184 CNRCVFGFLSCGKHTLSRSKLRRQMLKCGSGEGQII*TCSENPHEYPA*D 35
C R G L CGKH+ R KCG Q TC +YP+ D
Sbjct: 305 CKRECGGMLQCGKHSCERG---CHAGKCGGCPLQGRRTCPCGKKDYPSLD 351
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.130 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,563,295
Number of Sequences: 37544
Number of extensions: 244488
Number of successful extensions: 564
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 555
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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