Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_N02
         (575 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical pr...   266   1e-71
Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical pr...   152   2e-37
U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical p...    63   1e-10
AF078792-2|AAC26946.1|  512|Caenorhabditis elegans Hypothetical ...    33   0.11 
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z81537-8|CAB04380.1|  343|Caenorhabditis elegans Hypothetical pr...    29   1.8  
Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical pr...    28   4.1  
Z93374-4|CAB07556.1|  834|Caenorhabditis elegans Hypothetical pr...    28   5.5  
U00035-3|AAA50645.1|  548|Caenorhabditis elegans Egg sterile (un...    27   7.2  

>Z75530-3|CAA99793.1|  702|Caenorhabditis elegans Hypothetical
           protein C47E8.5 protein.
          Length = 702

 Score =  266 bits (651), Expect = 1e-71
 Identities = 132/188 (70%), Positives = 146/188 (77%)
 Frame = +1

Query: 10  KYYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYIT 189
           K+YEQFGKNLKLGIHEDS NR KLSD LRY TSA GDE  SLKEYVSRMKENQ  IYYIT
Sbjct: 407 KFYEQFGKNLKLGIHEDSTNRKKLSDFLRYSTSA-GDEPTSLKEYVSRMKENQTQIYYIT 465

Query: 190 GENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXX 369
           GE++D VA S+FVERVK RG+EV+YM +PIDEY VQQ+KEYDGK LVSVT          
Sbjct: 466 GESKDVVAASAFVERVKSRGFEVLYMCDPIDEYCVQQLKEYDGKKLVSVTKEGLELPETE 525

Query: 370 XXXXXXXXXXXXXXGLCKVMKNILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
                          LCKV+K+IL+KKVEKV VSNRLV SPCCIVT++YGWSANMERIMK
Sbjct: 526 EEKKKFEEDKVAYENLCKVIKDILEKKVEKVGVSNRLVSSPCCIVTSEYGWSANMERIMK 585

Query: 550 AQALRDTS 573
           AQALRD+S
Sbjct: 586 AQALRDSS 593


>Z68751-3|CAA92973.1|  760|Caenorhabditis elegans Hypothetical protein
            T05E11.3 protein.
          Length = 760

 Score =  152 bits (368), Expect = 2e-37
 Identities = 76/183 (41%), Positives = 105/183 (57%), Gaps = 1/183 (0%)
 Frame = +1

Query: 13   YYEQFGKNLKLGIHEDSQNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYITG 192
            ++ +F  N+KLG+ ED  NR +L+ LLR+ +S   D+  +L  YV RMKE Q  IYY+ G
Sbjct: 461  FWSEFSTNIKLGVMEDPSNRMRLAKLLRFQSSNDADKTTTLAAYVERMKEKQDAIYYMAG 520

Query: 193  ENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSVTXXXXXXXXXXX 372
             +R +V  S FVER+  +GYEV+++TE +DEY +Q M EY+ K   +V            
Sbjct: 521  TSRKEVETSPFVERLIAKGYEVLFLTEAVDEYCIQAMPEYESKKFQNVAKEGVTIDDGEK 580

Query: 373  XXXXXXXXXXXXXGLCKVMK-NILDKKVEKVVVSNRLVESPCCIVTAQYGWSANMERIMK 549
                          L   +K   L   +EK VVS RLV+SP  +V + YGWS NMERIMK
Sbjct: 581  AKEAHKGLEEEFKPLTDWLKETALKDLIEKAVVSQRLVKSPSALVASSYGWSGNMERIMK 640

Query: 550  AQA 558
            +QA
Sbjct: 641  SQA 643


>U00036-14|ABC71802.1|  672|Caenorhabditis elegans Hypothetical
           protein R151.7a protein.
          Length = 672

 Score = 63.3 bits (147), Expect = 1e-10
 Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 7/114 (6%)
 Frame = +1

Query: 16  YEQFGKNLKL----GI--HEDSQNRSKLSDLLRYHTSAS-GDEACSLKEYVSRMKENQKH 174
           Y +F KN  L    G+   +D   +  ++ LL + +S+    E  SL +YV RM+E QK 
Sbjct: 400 YSEFFKNYSLYFKEGVVTEQDQGVKEDVAKLLLFESSSKKAGELTSLGDYVKRMQEGQKE 459

Query: 175 IYYITGENRDQVANSSFVERVKKRGYEVVYMTEPIDEYVVQQMKEYDGKTLVSV 336
           IYY+   NR    +S + E +K +  EV+++ +P DE V   + ++  K LV V
Sbjct: 460 IYYMYANNRQLAESSPYYEVIKSQNKEVLFLYDPADEVVFLGLGQFGMKQLVPV 513


>AF078792-2|AAC26946.1|  512|Caenorhabditis elegans Hypothetical
           protein Y40D12A.2 protein.
          Length = 512

 Score = 33.5 bits (73), Expect = 0.11
 Identities = 20/75 (26%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
 Frame = +1

Query: 130 SLKEYVSRMKENQKHIYYITGENR---DQVANSSFVERVKKRGYEVVYM--TEPID-EYV 291
           ++K++   + + +KH+    G+     + V NS F+ +  K+  +   M   +P+     
Sbjct: 373 TMKKFFDTVIDAKKHVAMFNGDADTLCNYVENSQFIYKTLKKTVKTAMMPWNDPVQLPMA 432

Query: 292 VQQMKEYDGKTLVSV 336
           V Q+ EYDG TL+S+
Sbjct: 433 VGQVTEYDGITLISI 447


>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical
           protein K10C2.1 protein.
          Length = 2314

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +1

Query: 64  QNRSKLSDLLRYHTSASGDEACSLKEYVSRMKENQKHIYYITGEN 198
           + +S   DLL      + D A +L ++  R  E Q   +YITGE+
Sbjct: 131 REKSATPDLLYNDDKTATDNALALVQFFQRFPEYQGRDFYITGES 175


>Z81537-8|CAB04380.1|  343|Caenorhabditis elegans Hypothetical
           protein F41D3.9 protein.
          Length = 343

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
 Frame = +1

Query: 43  LGIHEDSQNRSKLSDLLR------YHTSASGDEA-CSLKEYVSRMKENQKHIYYITGENR 201
           LGI  D    S ++D+LR      + +S S D    SLK Y S  + + +H Y + G N 
Sbjct: 74  LGIISDHSRLSNVTDVLRNQSNVVFASSTSDDHMHLSLKSYKSVRRFHPRHKYILYGLNM 133

Query: 202 DQVANSSFVERVKKR 246
            +    +F+E++ +R
Sbjct: 134 SE----AFIEKLPQR 144


>Z78062-3|CAB01496.1| 1232|Caenorhabditis elegans Hypothetical
           protein F16D3.4 protein.
          Length = 1232

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 16/42 (38%), Positives = 24/42 (57%)
 Frame = -3

Query: 297 LNYILINGFSHVYNLIPTLLDSFHK**VSNLVTVLTSNVIDV 172
           +NY+  +   H+Y   P LLD +    V+NLV ++T   IDV
Sbjct: 123 VNYLRYSRLLHLYQEQPRLLDKWIPEIVANLVDLVTLIGIDV 164


>Z93374-4|CAB07556.1|  834|Caenorhabditis elegans Hypothetical
           protein C06C6.6 protein.
          Length = 834

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +1

Query: 133 LKEYVSRMKENQKHIYYITGENRDQVANSSFVERVKKRGYEVVYM 267
           L + VSR+K N K    +     D V N S    V+K+  EV+Y+
Sbjct: 788 LNKDVSRLKANAKPSPIVMKSIMDVVENKSKTHEVEKKRSEVLYV 832


>U00035-3|AAA50645.1|  548|Caenorhabditis elegans Egg sterile
           (unfertilizable) protein2 protein.
          Length = 548

 Score = 27.5 bits (58), Expect = 7.2
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 184 CNRCVFGFLSCGKHTLSRSKLRRQMLKCGSGEGQ 83
           CN+C  G   CGK+ +  SK+   +  C  G  +
Sbjct: 251 CNKCQKGAHKCGKNCIKASKVCDGIPDCDDGSDE 284


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.130    0.365 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,730,234
Number of Sequences: 27780
Number of extensions: 216191
Number of successful extensions: 663
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)