Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M24
(600 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT020035-1|AAV38838.1| 219|Homo sapiens brain-specific protein ... 53 9e-07
BC131506-1|AAI31507.1| 219|Homo sapiens tubulin polymerization ... 53 9e-07
BC040496-1|AAH40496.1| 234|Homo sapiens TPPP protein protein. 53 9e-07
AY319261-1|AAQ96657.1| 219|Homo sapiens fibroblast growth facto... 53 9e-07
AB017016-1|BAA36164.1| 219|Homo sapiens p25 alpha protein. 53 9e-07
BC037798-1|AAH37798.1| 176|Homo sapiens TPPP3 protein protein. 52 2e-06
BC000691-1|AAH00691.1| 176|Homo sapiens brain specific protein ... 52 2e-06
AF132972-1|AAD27747.1| 176|Homo sapiens CGI-38 protein protein. 52 2e-06
BC038970-1|AAH38970.1| 170|Homo sapiens tubulin polymerization-... 42 0.002
AY173946-1|AAO49716.1| 170|Homo sapiens brain-specific protein ... 42 0.002
AY072034-1|AAL62338.1| 170|Homo sapiens p25 beta protein. 42 0.002
D87440-1|BAA13382.2| 702|Homo sapiens KIAA0252 protein. 29 9.4
BC015052-1|AAH15052.1| 585|Homo sapiens Rtf1, Paf1/RNA polymera... 29 9.4
>BT020035-1|AAV38838.1| 219|Homo sapiens brain-specific protein p25
alpha protein.
Length = 219
Score = 52.8 bits (121), Expect = 9e-07
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 193 KDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFSKFGDPKSDGKLITLSQSDKWMKQA 372
K + +E+ A E +P S ++AF+ F+ GD ++ G+ + K K
Sbjct: 29 KRLSLESEGAGEGAAASPELS-----ALEEAFRRFAVHGDARATGREMHGKNWSKLCKDC 83
Query: 373 KVIDGKKITTTDTAIHFKKIKSVK---IGIEDYQKFLDDLAKNK 495
+VIDG+ +T TD I F KIK I E +Q+ L++LAK +
Sbjct: 84 QVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALEELAKKR 127
>BC131506-1|AAI31507.1| 219|Homo sapiens tubulin polymerization
promoting protein protein.
Length = 219
Score = 52.8 bits (121), Expect = 9e-07
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 193 KDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFSKFGDPKSDGKLITLSQSDKWMKQA 372
K + +E+ A E +P S ++AF+ F+ GD ++ G+ + K K
Sbjct: 29 KRLSLESEGAGEGAAASPELS-----ALEEAFRRFAVHGDARATGREMHGKNWSKLCKDC 83
Query: 373 KVIDGKKITTTDTAIHFKKIKSVK---IGIEDYQKFLDDLAKNK 495
+VIDG+ +T TD I F KIK I E +Q+ L++LAK +
Sbjct: 84 QVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALEELAKKR 127
>BC040496-1|AAH40496.1| 234|Homo sapiens TPPP protein protein.
Length = 234
Score = 52.8 bits (121), Expect = 9e-07
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 193 KDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFSKFGDPKSDGKLITLSQSDKWMKQA 372
K + +E+ A E +P S ++AF+ F+ GD ++ G+ + K K
Sbjct: 44 KRLSLESEGAGEGAAASPELS-----ALEEAFRRFAVHGDARATGREMHGKNWSKLCKDC 98
Query: 373 KVIDGKKITTTDTAIHFKKIKSVK---IGIEDYQKFLDDLAKNK 495
+VIDG+ +T TD I F KIK I E +Q+ L++LAK +
Sbjct: 99 QVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALEELAKKR 142
>AY319261-1|AAQ96657.1| 219|Homo sapiens fibroblast growth factor-2
repression protein-1 protein.
Length = 219
Score = 52.8 bits (121), Expect = 9e-07
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 193 KDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFSKFGDPKSDGKLITLSQSDKWMKQA 372
K + +E+ A E +P S ++AF+ F+ GD ++ G+ + K K
Sbjct: 29 KRLSLESEGAGEGAAASPELS-----ALEEAFRRFAVHGDARATGREMHGKNWSKLCKDC 83
Query: 373 KVIDGKKITTTDTAIHFKKIKSVK---IGIEDYQKFLDDLAKNK 495
+VIDG+ +T TD I F KIK I E +Q+ L++LAK +
Sbjct: 84 QVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALEELAKKR 127
>AB017016-1|BAA36164.1| 219|Homo sapiens p25 alpha protein.
Length = 219
Score = 52.8 bits (121), Expect = 9e-07
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 3/104 (2%)
Frame = +1
Query: 193 KDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFSKFGDPKSDGKLITLSQSDKWMKQA 372
K + +E+ A E +P S ++AF+ F+ GD ++ G+ + K K
Sbjct: 29 KRLSLESEGAGEGAAASPELS-----ALEEAFRRFAVHGDARATGREMHGKNWSKLCKDC 83
Query: 373 KVIDGKKITTTDTAIHFKKIKSVK---IGIEDYQKFLDDLAKNK 495
+VIDG+ +T TD I F KIK I E +Q+ L++LAK +
Sbjct: 84 QVIDGRNVTVTDVDIVFSKIKGKSCRTITFEQFQEALEELAKKR 127
>BC037798-1|AAH37798.1| 176|Homo sapiens TPPP3 protein protein.
Length = 176
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +1
Query: 277 KDAFKAFSKFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVK---I 447
+++F+ F+ GDPK+ G+ + K K KV DGK +T TD I F K+K I
Sbjct: 11 EESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVI 70
Query: 448 GIEDYQKFLDDLAKNK 495
E+++K L++LA +
Sbjct: 71 NYEEFKKALEELATKR 86
>BC000691-1|AAH00691.1| 176|Homo sapiens brain specific protein
protein.
Length = 176
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +1
Query: 277 KDAFKAFSKFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVK---I 447
+++F+ F+ GDPK+ G+ + K K KV DGK +T TD I F K+K I
Sbjct: 11 EESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVI 70
Query: 448 GIEDYQKFLDDLAKNK 495
E+++K L++LA +
Sbjct: 71 NYEEFKKALEELATKR 86
>AF132972-1|AAD27747.1| 176|Homo sapiens CGI-38 protein protein.
Length = 176
Score = 52.0 bits (119), Expect = 2e-06
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 3/76 (3%)
Frame = +1
Query: 277 KDAFKAFSKFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVK---I 447
+++F+ F+ GDPK+ G+ + K K KV DGK +T TD I F K+K I
Sbjct: 11 EESFRKFAIHGDPKASGQEMNGKNWAKLCKDCKVADGKSVTGTDVDIVFSKVKGKSARVI 70
Query: 448 GIEDYQKFLDDLAKNK 495
E+++K L++LA +
Sbjct: 71 NYEEFKKALEELATKR 86
>BC038970-1|AAH38970.1| 170|Homo sapiens tubulin
polymerization-promoting protein family member 2
protein.
Length = 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 286 FKAFSKFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQ 465
F F+ FG+ S G + K K ++DGK +T+TD I F K+K+ +Q
Sbjct: 9 FHRFAAFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQ 68
Query: 466 KF 471
+F
Sbjct: 69 QF 70
>AY173946-1|AAO49716.1| 170|Homo sapiens brain-specific protein
p25-like protein protein.
Length = 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 286 FKAFSKFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQ 465
F F+ FG+ S G + K K ++DGK +T+TD I F K+K+ +Q
Sbjct: 9 FHRFAAFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQ 68
Query: 466 KF 471
+F
Sbjct: 69 QF 70
>AY072034-1|AAL62338.1| 170|Homo sapiens p25 beta protein.
Length = 170
Score = 41.9 bits (94), Expect = 0.002
Identities = 20/62 (32%), Positives = 31/62 (50%)
Frame = +1
Query: 286 FKAFSKFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQ 465
F F+ FG+ S G + K K ++DGK +T+TD I F K+K+ +Q
Sbjct: 9 FHRFAAFGESSSSGTEMNNKNFSKLCKDCGIMDGKTVTSTDVDIVFSKVKAKNARTITFQ 68
Query: 466 KF 471
+F
Sbjct: 69 QF 70
>D87440-1|BAA13382.2| 702|Homo sapiens KIAA0252 protein.
Length = 702
Score = 29.5 bits (63), Expect = 9.4
Identities = 30/141 (21%), Positives = 64/141 (45%)
Frame = +1
Query: 139 SADAEGVNSAVEQVTQDVKDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFSKFGDPK 318
S+ + +S+ E + +V + ++ +++ + + S D F D + GD +
Sbjct: 127 SSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDE--EFHDGYGE-DLMGDEE 183
Query: 319 SDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKK 498
+L +++ ++ + I+ +++ I KK+K+ K +K + K KK
Sbjct: 184 DRARLEQMTEKEREQELFNRIEKREVLKRRFEIK-KKLKTAK------KK--EKKEKKKK 234
Query: 499 VELDDFKKKLTTCGQPGITSH 561
E + KKKLT + +TSH
Sbjct: 235 QEEEQEKKKLTQIQESQVTSH 255
>BC015052-1|AAH15052.1| 585|Homo sapiens Rtf1, Paf1/RNA polymerase
II complex component, homolog (S. cerevisiae) protein.
Length = 585
Score = 29.5 bits (63), Expect = 9.4
Identities = 30/141 (21%), Positives = 64/141 (45%)
Frame = +1
Query: 139 SADAEGVNSAVEQVTQDVKDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFSKFGDPK 318
S+ + +S+ E + +V + ++ +++ + + S D F D + GD +
Sbjct: 10 SSGSSDKDSSAESSAPEEGEVSDSDSNSSSSSSDSDSSSEDE--EFHDGYGE-DLMGDEE 66
Query: 319 SDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKK 498
+L +++ ++ + I+ +++ I KK+K+ K +K + K KK
Sbjct: 67 DRARLEQMTEKEREQELFNRIEKREVLKRRFEIK-KKLKTAK------KK--EKKEKKKK 117
Query: 499 VELDDFKKKLTTCGQPGITSH 561
E + KKKLT + +TSH
Sbjct: 118 QEEEQEKKKLTQIQESQVTSH 138
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,535,263
Number of Sequences: 237096
Number of extensions: 1549398
Number of successful extensions: 4029
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4029
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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