Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M24
(600 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U88308-6|AAB42320.1| 180|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AL032630-1|CAA21558.1| 366|Caenorhabditis elegans Hypothetical ... 31 0.83
Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical p... 30 1.5
AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effe... 30 1.5
AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical... 29 1.9
Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 29 3.3
Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical pr... 29 3.3
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 29 3.3
AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein. 29 3.3
Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 28 4.4
U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain (pr... 28 4.4
Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical p... 28 5.9
Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical p... 28 5.9
Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical p... 28 5.9
Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical p... 28 5.9
X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein. 28 5.9
AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical ... 28 5.9
AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical ... 28 5.9
AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical ... 28 5.9
AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical ... 28 5.9
AF067944-2|AAY86264.1| 97|Caenorhabditis elegans Hypothetical ... 28 5.9
AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical ... 28 5.9
Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical p... 27 7.7
Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical pr... 27 7.7
AF016444-11|AAB65922.1| 203|Caenorhabditis elegans Hypothetical... 27 7.7
>U88308-6|AAB42320.1| 180|Caenorhabditis elegans Hypothetical
protein C32E8.3 protein.
Length = 180
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/102 (33%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Frame = +1
Query: 277 KDAFKAFSKFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKI--KSVKIG 450
K + AF+KFG + +T DKW+K A V+D K IT T T I F K+ K
Sbjct: 15 KKRWDAFTKFG--AATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPKKKAT 72
Query: 451 IEDYQKFL----DDLAKNKKV----ELDDFKKKLTTCGQPGI 552
++ +K L +D A+ K ELD +KL P +
Sbjct: 73 FDETKKVLAFVAEDRARQSKKPIQDELDAITEKLAKLEAPSV 114
>AL032630-1|CAA21558.1| 366|Caenorhabditis elegans Hypothetical
protein Y62H9A.1 protein.
Length = 366
Score = 30.7 bits (66), Expect = 0.83
Identities = 25/72 (34%), Positives = 37/72 (51%)
Frame = -2
Query: 416 IAVSVVVIFFPSITFACFIHLSLCDRVMSLPSDLGSPNFENALKASLNGTPLSLLLFGVP 237
I +S+VVI P ITF + LS +++S + + +NAL SL LL FGV
Sbjct: 214 IGISIVVIIIPLITFKSYTTLSKIHKMISKQTLI---QLKNALAISL----WYLLQFGVL 266
Query: 236 LVASAAVPFSIL 201
+ AA ++L
Sbjct: 267 VGIPAATAMALL 278
>Z83120-9|CAB05589.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 310 DPKSDGKLIT----LSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLD 477
+P++DGK+ + S + K + + V D ++I + I+F K + K+ IED ++
Sbjct: 345 NPENDGKMCSGNCWKSVTMKEVSEVLVPDSEEILQKEVKIYFMKSRIAKMPIEDGALIVN 404
Query: 478 DLAKNKKVELDDFKKK 525
N + +F KK
Sbjct: 405 IYVFNTYIPFCEFVKK 420
>Z81515-11|CAB04199.2| 773|Caenorhabditis elegans Hypothetical
protein R06A4.7 protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 310 DPKSDGKLIT----LSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLD 477
+P++DGK+ + S + K + + V D ++I + I+F K + K+ IED ++
Sbjct: 345 NPENDGKMCSGNCWKSVTMKEVSEVLVPDSEEILQKEVKIYFMKSRIAKMPIEDGALIVN 404
Query: 478 DLAKNKKVELDDFKKK 525
N + +F KK
Sbjct: 405 IYVFNTYIPFCEFVKK 420
>AF011893-1|AAC27124.1| 773|Caenorhabditis elegans maternal-effect
sterile 2 protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = +1
Query: 310 DPKSDGKLIT----LSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLD 477
+P++DGK+ + S + K + + V D ++I + I+F K + K+ IED ++
Sbjct: 345 NPENDGKMCSGNCWKSVTMKEVSEVLVPDSEEILQKEVKIYFMKSRIAKMPIEDGALIVN 404
Query: 478 DLAKNKKVELDDFKKK 525
N + +F KK
Sbjct: 405 IYVFNTYIPFCEFVKK 420
>AC006712-10|AAK39322.2| 273|Caenorhabditis elegans Hypothetical
protein Y119C1B.1 protein.
Length = 273
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/100 (18%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Frame = +3
Query: 105 ITSPKYIVCEYVCXXXXXXXXXXASDAGC-EGCQDRERNSCGSNQRNAEQKQRQRRTVQG 281
+ SP+++ +Y+C A GC G ++ R SN + +++ + R++++
Sbjct: 2 VLSPEHLGSDYLCFVATATITSVAITLGCTAGHREIFRRRSSSNSKKSKKSMKSRKSMKS 61
Query: 282 CLQSILKIR*SQVRWQTHNSITERQMDETSESY*REENHD 401
R + + N ++ R M + + R + D
Sbjct: 62 KRDRRTSER-ERKSSRDRNKVSRRSMKSSRDRKSRRSSKD 100
>Z93385-5|CAB07639.1| 734|Caenorhabditis elegans Hypothetical
protein M01E5.5b protein.
Length = 734
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/112 (22%), Positives = 47/112 (41%)
Frame = +1
Query: 121 ILCVNMSADAEGVNSAVEQVTQDVKDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFS 300
ILC + A ++G + +++++ Q +KD K E A A + KA
Sbjct: 605 ILCNHQRAVSKGFDESMQKLEQKIKDKKKEVKEAEAALKSARGAEKE---------KAQK 655
Query: 301 KFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIE 456
K+ K K + +S++DK + + K+ D I K ++ +E
Sbjct: 656 KYDRLKEQLKKLKISRTDKDENKQIALGTSKLNYIDPRITVAWCKKFEVPLE 707
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/112 (22%), Positives = 47/112 (41%)
Frame = +1
Query: 121 ILCVNMSADAEGVNSAVEQVTQDVKDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFS 300
ILC + A ++G + +++++ Q +KD K E A A + KA
Sbjct: 677 ILCNHQRAVSKGFDESMQKLEQKIKDKKKEVKEAEAALKSARGAEKE---------KAQK 727
Query: 301 KFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIE 456
K+ K K + +S++DK + + K+ D I K ++ +E
Sbjct: 728 KYDRLKEQLKKLKISRTDKDENKQIALGTSKLNYIDPRITVAWCKKFEVPLE 779
>Z92828-5|CAB07332.2| 586|Caenorhabditis elegans Hypothetical
protein C37A5.9 protein.
Length = 586
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 475 DDLAK-NKKVELDDF-KKKLTTCGQPGITSHVTKSPA 579
DDL K ++ ELDD+ K K+T Q G T+ K PA
Sbjct: 325 DDLGKIDEDEELDDYLKMKMTDDSQKGSTNRSPKGPA 361
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 28.7 bits (61), Expect = 3.3
Identities = 25/112 (22%), Positives = 47/112 (41%)
Frame = +1
Query: 121 ILCVNMSADAEGVNSAVEQVTQDVKDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFS 300
ILC + A ++G + +++++ Q +KD K E A A + KA
Sbjct: 677 ILCNHQRAVSKGFDESMQKLEQKIKDKKKEVKEAEAALKSARGAEKE---------KAQK 727
Query: 301 KFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIE 456
K+ K K + +S++DK + + K+ D I K ++ +E
Sbjct: 728 KYDRLKEQLKKLKISRTDKDENKQIALGTSKLNYIDPRITVAWCKKFEVPLE 779
>AF468834-1|AAL77082.1| 586|Caenorhabditis elegans PRY-1 protein.
Length = 586
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +1
Query: 475 DDLAK-NKKVELDDF-KKKLTTCGQPGITSHVTKSPA 579
DDL K ++ ELDD+ K K+T Q G T+ K PA
Sbjct: 325 DDLGKIDEDEELDDYLKMKMTDDSQKGSTNRSPKGPA 361
>Z83223-6|CAB05719.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 28.3 bits (60), Expect = 4.4
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Frame = +1
Query: 139 SADAEGVNS--AVEQVTQDVKDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFSKFGD 312
+ DA V + AVE+ T++V + E A EA T +S++ V + + +
Sbjct: 300 TTDASEVTTTKAVEEATEEVTEEATE---ATEAPVATTKESSEMHV---NTIRNMIRSAS 353
Query: 313 PKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIED-YQKFLDDLAK 489
K K +TL K+ + ++ + KK+T T +K+ S ++D + L + K
Sbjct: 354 EKDLSKYVTLISEGKFSELFELAEQKKLTLTSK--FDEKLSSKMAKLKDLINEALSEKEK 411
Query: 490 NKKVE--LDDFKK 522
+ ++E ++ F+K
Sbjct: 412 SGEIEQAMEKFEK 424
>Z81538-6|CAB04387.1| 884|Caenorhabditis elegans Hypothetical
protein E01G4.6 protein.
Length = 884
Score = 28.3 bits (60), Expect = 4.4
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Frame = +1
Query: 139 SADAEGVNS--AVEQVTQDVKDVKIENGTAAEATNGTPNKSNDNGVPFKDAFKAFSKFGD 312
+ DA V + AVE+ T++V + E A EA T +S++ V + + +
Sbjct: 300 TTDASEVTTTKAVEEATEEVTEEATE---ATEAPVATTKESSEMHV---NTIRNMIRSAS 353
Query: 313 PKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIED-YQKFLDDLAK 489
K K +TL K+ + ++ + KK+T T +K+ S ++D + L + K
Sbjct: 354 EKDLSKYVTLISEGKFSELFELAEQKKLTLTSK--FDEKLSSKMAKLKDLINEALSEKEK 411
Query: 490 NKKVE--LDDFKK 522
+ ++E ++ F+K
Sbjct: 412 SGEIEQAMEKFEK 424
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 28.3 bits (60), Expect = 4.4
Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 7/100 (7%)
Frame = +1
Query: 250 KSNDNGVPFKDAFKAFSKFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIH--- 420
KSN N V KD K ++ K D L +S K +++ G KI T AI
Sbjct: 325 KSNVNEVK-KDVEKNIAE----KVDDITKELEKSAKSLEETTDKIGSKIDNTSQAIKSNL 379
Query: 421 ----FKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKL 528
K KSV ++ +K + DLA K D ++KL
Sbjct: 380 EEASLKTEKSVNDAVKSGEKLIGDLASEAKKTFDSAEQKL 419
>U00058-4|AAD31932.3| 249|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 24 protein.
Length = 249
Score = 28.3 bits (60), Expect = 4.4
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +1
Query: 277 KDAFKAFSKFGDPKSDGKLITLSQSDKWMKQAKVIDGKKITT 402
K+ F +F P GK T+ ++ K++DGKKI T
Sbjct: 173 KNTFSTVIRFSSPTEPGKNATVRKTST---STKLVDGKKIVT 211
>Z70271-2|CAA94236.2| 1256|Caenorhabditis elegans Hypothetical
protein W08D2.5 protein.
Length = 1256
Score = 27.9 bits (59), Expect = 5.9
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Frame = +1
Query: 112 ALNILCVNMSA-------DAEGVNSAVEQVTQDVKDVKIENGTAAEATNGTPNKSNDNGV 270
A+N++C + + D V + V Q+++ VK+E E ++ NG+
Sbjct: 458 AINVVCFDKTGTLTEDGLDFHVVRPVMSAVNQEIQKVKLEKSNRTEFMGEMTELTSRNGL 517
Query: 271 PFK-DAFKAFS 300
PF D KA +
Sbjct: 518 PFDGDLVKAIA 528
>Z68760-15|CAL44969.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 361 MKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCG 540
++ I + I DT H+K + V++ +Y +D + + + K TC
Sbjct: 362 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 421
Query: 541 QPGIT 555
P T
Sbjct: 422 PPAHT 426
>Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 361 MKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCG 540
++ I + I DT H+K + V++ +Y +D + + + K TC
Sbjct: 323 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 382
Query: 541 QPGIT 555
P T
Sbjct: 383 PPAHT 387
>Z68760-12|CAD27623.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 361 MKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCG 540
++ I + I DT H+K + V++ +Y +D + + + K TC
Sbjct: 336 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 395
Query: 541 QPGIT 555
P T
Sbjct: 396 PPAHT 400
>Z68760-11|CAA92997.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 361 MKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCG 540
++ I + I DT H+K + V++ +Y +D + + + K TC
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397
Query: 541 QPGIT 555
P T
Sbjct: 398 PPAHT 402
>X68070-1|CAA48207.1| 438|Caenorhabditis elegans Lin-3 protein.
Length = 438
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 361 MKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCG 540
++ I + I DT H+K + V++ +Y +D + + + K TC
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397
Query: 541 QPGIT 555
P T
Sbjct: 398 PPAHT 402
>AL032641-9|CAL44964.1| 462|Caenorhabditis elegans Hypothetical
protein F36H1.4d protein.
Length = 462
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 361 MKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCG 540
++ I + I DT H+K + V++ +Y +D + + + K TC
Sbjct: 362 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 421
Query: 541 QPGIT 555
P T
Sbjct: 422 PPAHT 426
>AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 361 MKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCG 540
++ I + I DT H+K + V++ +Y +D + + + K TC
Sbjct: 323 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 382
Query: 541 QPGIT 555
P T
Sbjct: 383 PPAHT 387
>AL032641-6|CAD27613.1| 436|Caenorhabditis elegans Hypothetical
protein F36H1.4b protein.
Length = 436
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 361 MKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCG 540
++ I + I DT H+K + V++ +Y +D + + + K TC
Sbjct: 336 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 395
Query: 541 QPGIT 555
P T
Sbjct: 396 PPAHT 400
>AL032641-5|CAA21649.2| 438|Caenorhabditis elegans Hypothetical
protein F36H1.4a protein.
Length = 438
Score = 27.9 bits (59), Expect = 5.9
Identities = 14/65 (21%), Positives = 26/65 (40%)
Frame = +1
Query: 361 MKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCG 540
++ I + I DT H+K + V++ +Y +D + + + K TC
Sbjct: 338 LRSQGTIPSRSINDDDTPKHYKSVPRVEVSAINYSGHIDFSTVSYQSTESEVSKASVTCP 397
Query: 541 QPGIT 555
P T
Sbjct: 398 PPAHT 402
>AF067944-2|AAY86264.1| 97|Caenorhabditis elegans Hypothetical
protein K10C9.9 protein.
Length = 97
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/56 (30%), Positives = 31/56 (55%)
Frame = +1
Query: 391 KITTTDTAIHFKKIKSVKIGIEDYQKFLDDLAKNKKVELDDFKKKLTTCGQPGITS 558
K T+ + A+ + +++GI +Q LD+L N K +L D+KK+ + G +S
Sbjct: 32 KCTSQEEAVRAVQACIMRLGIFLHQ--LDELHMNNKTDLADYKKECQSIKFIGFSS 85
>AF036700-2|AAB88365.1| 550|Caenorhabditis elegans Hypothetical
protein M04G7.2 protein.
Length = 550
Score = 27.9 bits (59), Expect = 5.9
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 325 GKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDLA-KNKKV 501
GKL S S + + +K ++ TT+ +I + + E Y+K D A ++K+
Sbjct: 207 GKLTADSPSSR--RTSKSLEENSSETTNDSISLADDEETR---EAYRKLFKDFAMSSQKM 261
Query: 502 ELDDFKKKLTTC-GQP 546
LDDFK++ + G P
Sbjct: 262 TLDDFKQEFSNLPGDP 277
>Z78413-1|CAB01663.1| 727|Caenorhabditis elegans Hypothetical
protein T01C3.1 protein.
Length = 727
Score = 27.5 bits (58), Expect = 7.7
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 1/85 (1%)
Frame = -2
Query: 332 SLPSDLGSPNFENALKASLNGTPLSLLLFGVPLVASAAVPFSILTSFTSCVTCSTAELTP 153
S+PS+ SP F + + + T S+ L+ AS +P +L +T + S T
Sbjct: 297 SVPSESVSPKFLVSHQLRKSQTNKSITLWHSMSCASTTLPTHVLDQYTKNLELSVNSYTG 356
Query: 152 SASADIFTHNIFRACD-I*DQIRCG 81
+ + +T AC + D I CG
Sbjct: 357 ATIHNFYTQ---VACSPVSDVIACG 378
>Z75531-10|CAJ85759.1| 500|Caenorhabditis elegans Hypothetical
protein C54D10.12 protein.
Length = 500
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 321 RWQTHNSITERQMDETSESY*REENHDD-*YRDSL-*KDKIS*DRHRGLSEVPRRSCQE* 494
RW+ N E+Q +E E REE ++ +++SL D+ ++ R L E+ R +E
Sbjct: 47 RWEEENRRFEKQKNEAREKRKREEEQEERQFKESLKLLDESRREKERKLQELLLRQKEEA 106
Query: 495 EGRA 506
E A
Sbjct: 107 EEEA 110
>Z75531-6|CAA99807.1| 1144|Caenorhabditis elegans Hypothetical
protein C54D10.7 protein.
Length = 1144
Score = 27.5 bits (58), Expect = 7.7
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +3
Query: 321 RWQTHNSITERQMDETSESY*REENHDD-*YRDSL-*KDKIS*DRHRGLSEVPRRSCQE* 494
RW+ N E+Q +E E REE ++ +++SL D+ ++ R L E+ R +E
Sbjct: 752 RWEEENRRFEKQKNEAREKRKREEEQEERQFKESLKLLDESRREKERKLQELLLRQKEEA 811
Query: 495 EGRA 506
E A
Sbjct: 812 EEEA 815
>Z70287-1|CAA94302.3| 294|Caenorhabditis elegans Hypothetical
protein R09E10.1 protein.
Length = 294
Score = 27.5 bits (58), Expect = 7.7
Identities = 23/105 (21%), Positives = 41/105 (39%), Gaps = 6/105 (5%)
Frame = +1
Query: 304 FGDPKSDGKLITLSQSDKWMKQAKVIDGKKITTTDTAIHFKKIKSVKIGIEDYQKFLDDL 483
F PK + ++ L + K A++++ KI + G D + + D
Sbjct: 96 FSLPKDEPEITALQLDAELTKSARLMEEYKIALEQIITTLVSMMRRGNGTVDMENIVSDK 155
Query: 484 AK------NKKVELDDFKKKLTTCGQPGITSHVTKSPAAAAAVDR 600
+ NK+V+L K T QP + + K+ AA +R
Sbjct: 156 GQTAAEKLNKEVQLTQNYWKTDTKLQPAMNDAIAKNTVVLAAAER 200
>AF016444-11|AAB65922.1| 203|Caenorhabditis elegans Hypothetical
protein C36C5.15 protein.
Length = 203
Score = 27.5 bits (58), Expect = 7.7
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 451 IEDYQKFLDDLAKNKKVELDDFKKKLTT 534
++D+ K +D+L N K EL +FKK T
Sbjct: 48 MKDFVKEIDELDMNDKDELKEFKKSCDT 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,037,338
Number of Sequences: 27780
Number of extensions: 255311
Number of successful extensions: 1087
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1087
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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