Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_M24
         (600 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    25   0.75 
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   1.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   5.3  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.0  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    21   7.0  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   9.2  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 24.6 bits (51), Expect = 0.75
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 69  VSIPPTPNLISYITS 113
           ++ PPTPNL+ Y  S
Sbjct: 824 ITTPPTPNLLRYFAS 838


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = -2

Query: 308 PNFENALKASLNGTPLSLLLFGVPLVASAAVPFSILTSFTSCVTCSTA 165
           PN+ + + A L    + + + G  LV +A +    L S T+C   S A
Sbjct: 33  PNWTDLVLAGLFTMLIIVTIVGNTLVIAAVITTRRLRSVTNCFVSSLA 80


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = -2

Query: 299 ENALKASLNGTPLSLLLFGVPLVASAAVPFSILTSFTSCVTCSTAELTPSASA 141
           E    ASL+ T       G P      +  +  T+ T+  T +T   T +ASA
Sbjct: 634 ERERDASLSSTHSHPHEPGAPATTITTITTTTTTTTTTTTTTTTPNTTQNASA 686


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 567 CHVRCYTRLA 538
           CH RC  RLA
Sbjct: 481 CHARCIARLA 490


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 567 CHVRCYTRLA 538
           CH RC  RLA
Sbjct: 481 CHARCIARLA 490


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 505 LDDFKKKLTTCGQPGITSHVTKS 573
           +D    KLT   QPG+T+ +  S
Sbjct: 641 MDAICTKLTADCQPGVTAFIVTS 663


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,295
Number of Sequences: 438
Number of extensions: 3017
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)