Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M23
(546 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC045618-1|AAH45618.1| 561|Homo sapiens FLJ14803 protein protein. 82 1e-15
AK027709-1|BAB55314.1| 561|Homo sapiens protein ( Homo sapiens ... 82 1e-15
AK074732-1|BAC11168.1| 561|Homo sapiens protein ( Homo sapiens ... 82 1e-15
BC057784-1|AAH57784.1| 519|Homo sapiens FLJ14803 protein protein. 53 3e-08
AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein. 30 4.6
BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome proliferator... 29 8.0
BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein. 29 8.0
BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein. 29 8.0
AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome proliferator... 29 8.0
AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome proliferator... 29 8.0
AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activa... 29 8.0
AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein. 29 8.0
>BC045618-1|AAH45618.1| 561|Homo sapiens FLJ14803 protein protein.
Length = 561
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Frame = +2
Query: 197 RLWIHVTILERLVSEMERLDATLAAAGA-EPRLGTASLERVXXXXXXXXXXXXXXXXXQP 373
R WI+ TIL LV E+E + + G E ++G AS+ +
Sbjct: 340 RNWINETILVPLVQEIESVSTQMRRMGCPELQIGEASITSLKQAALVKAPLIPTLNTIVQ 399
Query: 374 FLEPFPDQRYVVQRVRELARGGCLSGYRWDGG----GAEWEESRPTDAELVLHLFASYLD 541
+L+ P+Q Y+ +R++EL++GGC+S +RW+ G G +W+ PTD+ +++H+F +YLD
Sbjct: 400 YLDLTPNQEYLFERIKELSQGGCMSSFRWNRGGDFKGRKWDTDLPTDSAIIMHVFCTYLD 459
>AK027709-1|BAB55314.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ14803 fis, clone NT2RP4001442. ).
Length = 561
Score = 82.2 bits (194), Expect = 1e-15
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Frame = +2
Query: 197 RLWIHVTILERLVSEMERLDATLAAAGA-EPRLGTASLERVXXXXXXXXXXXXXXXXXQP 373
R WI+ TIL LV E+E + + G E ++G AS+ +
Sbjct: 340 RNWINETILVPLVQEIESVSTQMRRMGCPELQIGEASITSLKQAALVKAPLIPTLDTIVQ 399
Query: 374 FLEPFPDQRYVVQRVRELARGGCLSGYRWDGG----GAEWEESRPTDAELVLHLFASYLD 541
+L+ P+Q Y+ +R++EL++GGC+S +RW+ G G +W+ PTD+ +++H+F +YLD
Sbjct: 400 YLDLTPNQEYLFERIKELSQGGCMSSFRWNRGGDFKGRKWDTDLPTDSAIIMHVFCTYLD 459
>AK074732-1|BAC11168.1| 561|Homo sapiens protein ( Homo sapiens
cDNA FLJ90251 fis, clone NT2RM4000115. ).
Length = 561
Score = 81.8 bits (193), Expect = 1e-15
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Frame = +2
Query: 197 RLWIHVTILERLVSEMERLDATLAAAGA-EPRLGTASLERVXXXXXXXXXXXXXXXXXQP 373
R WI+ TIL LV E+E + + G E ++G AS+ +
Sbjct: 340 RNWINETILVPLVQEIESVSTQMRRMGCPELQIGEASITGLKQAALVKAPLIPTLNTIVQ 399
Query: 374 FLEPFPDQRYVVQRVRELARGGCLSGYRWDGG----GAEWEESRPTDAELVLHLFASYLD 541
+L+ P+Q Y+ +R++EL++GGC+S +RW+ G G +W+ PTD+ +++H+F +YLD
Sbjct: 400 YLDLTPNQEYLFERIKELSQGGCMSSFRWNRGGDFKGRKWDTDLPTDSAIIMHVFCTYLD 459
>BC057784-1|AAH57784.1| 519|Homo sapiens FLJ14803 protein protein.
Length = 519
Score = 52.8 bits (121), Expect(2) = 3e-08
Identities = 19/47 (40%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Frame = +2
Query: 413 RVRELARGGCLSGYRWDGGG----AEWEESRPTDAELVLHLFASYLD 541
++ EL++GGC+S +RW+ GG +W+ PTD+ +++H+F +YLD
Sbjct: 371 QIGELSQGGCMSSFRWNRGGDFKGRKWDTDLPTDSAIIMHVFCTYLD 417
Score = 24.2 bits (50), Expect(2) = 3e-08
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 197 RLWIHVTILERLVSEMERLDATLAAAGA-EPRLGTAS 304
R WI+ TIL LV E+E + + G E ++G S
Sbjct: 340 RNWINETILVPLVQEIESVSTQMRRMGCPELQIGELS 376
>AK122582-1|BAC56923.1| 1383|Homo sapiens FLJ00269 protein protein.
Length = 1383
Score = 30.3 bits (65), Expect = 4.6
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +2
Query: 47 PLDNECAPAAGDSSPEGPREE 109
P +PAAG +SPEGPRE+
Sbjct: 1164 PAGGTLSPAAGPASPEGPREK 1184
>BC063829-1|AAH63829.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,
coactivator-related 1 protein.
Length = 1664
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 546 CTSR*EANRCSTSSASVGRDSSHSAPPPSHRYPLRQP-PR 430
C+S + RCS+SS+S SS S+ S R R P PR
Sbjct: 1470 CSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPR 1509
>BC063806-1|AAH63806.1| 1542|Homo sapiens PPRC1 protein protein.
Length = 1542
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 546 CTSR*EANRCSTSSASVGRDSSHSAPPPSHRYPLRQP-PR 430
C+S + RCS+SS+S SS S+ S R R P PR
Sbjct: 1350 CSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPR 1389
>BC002561-1|AAH02561.2| 659|Homo sapiens PPRC1 protein protein.
Length = 659
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 546 CTSR*EANRCSTSSASVGRDSSHSAPPPSHRYPLRQP-PR 430
C+S + RCS+SS+S SS S+ S R R P PR
Sbjct: 475 CSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPR 514
>AL500527-6|CAH72219.1| 631|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 631
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 546 CTSR*EANRCSTSSASVGRDSSHSAPPPSHRYPLRQP-PR 430
C+S + RCS+SS+S SS S+ S R R P PR
Sbjct: 437 CSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPR 476
>AL500527-5|CAH72218.1| 1664|Homo sapiens peroxisome
proliferator-activated receptor gamma,pus laevis)
protein.
Length = 1664
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 546 CTSR*EANRCSTSSASVGRDSSHSAPPPSHRYPLRQP-PR 430
C+S + RCS+SS+S SS S+ S R R P PR
Sbjct: 1470 CSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPR 1509
>AF325193-1|AAK11573.1| 1664|Homo sapiens PGC-1 related co-activator
protein.
Length = 1664
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 546 CTSR*EANRCSTSSASVGRDSSHSAPPPSHRYPLRQP-PR 430
C+S + RCS+SS+S SS S+ S R R P PR
Sbjct: 1470 CSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPR 1509
>AB011167-1|BAA25521.2| 1666|Homo sapiens KIAA0595 protein protein.
Length = 1666
Score = 29.5 bits (63), Expect = 8.0
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -1
Query: 546 CTSR*EANRCSTSSASVGRDSSHSAPPPSHRYPLRQP-PR 430
C+S + RCS+SS+S SS S+ S R R P PR
Sbjct: 1472 CSSSGRSRRCSSSSSSSSSSSSSSSSSSSSRSRSRSPSPR 1511
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,714,363
Number of Sequences: 237096
Number of extensions: 669961
Number of successful extensions: 3072
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2925
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3059
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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