Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M21
(418 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014642-1|AAH14642.1| 780|Homo sapiens hypothetical protein MG... 31 1.2
AK128330-1|BAC87387.1| 686|Homo sapiens protein ( Homo sapiens ... 31 1.2
AK093037-1|BAC04027.1| 555|Homo sapiens protein ( Homo sapiens ... 31 1.2
BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein. 30 2.7
AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease ... 30 2.7
AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens ... 30 2.7
AB048797-1|BAB39742.2| 537|Homo sapiens mosaic serine protease ... 30 2.7
AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic se... 30 2.7
U48252-1|AAC72246.1| 457|Homo sapiens protein kinase C-binding ... 29 4.7
U75651-1|AAB84228.1| 716|Homo sapiens dishevelled 3 protein. 29 6.2
U49262-1|AAB47447.1| 716|Homo sapiens dishevelled protein. 29 6.2
BC113524-1|AAI13525.1| 578|Homo sapiens IFT74 protein protein. 29 6.2
BC107742-1|AAI07743.1| 372|Homo sapiens IFT74 protein protein. 29 6.2
BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein. 29 6.2
BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein. 29 6.2
BC032459-1|AAH32459.1| 716|Homo sapiens dishevelled, dsh homolo... 29 6.2
BC018289-1|AAH18289.1| 608|Homo sapiens Unknown (protein for IM... 29 6.2
AY040325-1|AAK77221.1| 600|Homo sapiens capillary morphogenesis... 29 6.2
AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein. 29 6.2
AL356133-4|CAH72643.1| 600|Homo sapiens intraflagellar transpor... 29 6.2
AL110278-1|CAB53713.1| 548|Homo sapiens hypothetical protein pr... 29 6.2
AF006013-1|AAB65244.1| 716|Homo sapiens dishevelled 3 protein. 29 6.2
Z83844-2|CAB63037.1| 274|Homo sapiens golgi associated, gamma a... 29 8.2
Z83844-1|CAI20369.1| 639|Homo sapiens golgi associated, gamma a... 29 8.2
CR456493-1|CAG30379.1| 656|Homo sapiens GGA1 protein. 29 8.2
BC082760-1|AAH82760.1| 1062|Homo sapiens ATXN2L protein protein. 29 8.2
BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein. 29 8.2
BC044629-1|AAH44629.1| 552|Homo sapiens golgi associated, gamma... 29 8.2
BC016967-1|AAH16967.2| 545|Homo sapiens RNA pseudouridylate syn... 29 8.2
BC016064-1|AAH16064.1| 148|Homo sapiens proline rich 13 protein. 29 8.2
BC014257-1|AAH14257.1| 148|Homo sapiens proline rich 13 protein. 29 8.2
BC010239-1|AAH10239.1| 401|Homo sapiens ATXN2L protein protein. 29 8.2
BC007697-1|AAH07697.1| 554|Homo sapiens RPUSD2 protein protein. 29 8.2
BC000538-1|AAH00538.2| 365|Homo sapiens GGA1 protein protein. 29 8.2
AL035496-1|CAI20951.1| 639|Homo sapiens golgi associated, gamma... 29 8.2
AK075256-1|BAC11501.1| 639|Homo sapiens protein ( Homo sapiens ... 29 8.2
AK055971-1|BAB71059.1| 545|Homo sapiens protein ( Homo sapiens ... 29 8.2
AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain... 29 8.2
AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain... 29 8.2
AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain... 29 8.2
AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain... 29 8.2
AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain... 29 8.2
AF233521-1|AAF35393.1| 639|Homo sapiens gamma-adaptin related p... 29 8.2
AF218584-1|AAF42847.1| 639|Homo sapiens GGA1 protein. 29 8.2
AF190862-1|AAF05707.1| 639|Homo sapiens ADP-ribosylation factor... 29 8.2
>BC014642-1|AAH14642.1| 780|Homo sapiens hypothetical protein
MGC15523 protein.
Length = 780
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
GD G+HPR ++ Q L G +++ G PPG +G
Sbjct: 599 GDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAG 637
>AK128330-1|BAC87387.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ46472 fis, clone THYMU3023400. ).
Length = 686
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
GD G+HPR ++ Q L G +++ G PPG +G
Sbjct: 517 GDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAG 555
>AK093037-1|BAC04027.1| 555|Homo sapiens protein ( Homo sapiens
cDNA FLJ35718 fis, clone TESTI2000616. ).
Length = 555
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
GD G+HPR ++ Q L G +++ G PPG +G
Sbjct: 374 GDRGLHPRPQAVLSEQQNGLAVGGGEKAKGGPPPGNAAG 412
>BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein.
Length = 562
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 25 PRNGSMEGGTQVALPPG---PAQQSPRGAPPGAFSGG 126
P S + PPG PAQ SP G PPG S G
Sbjct: 36 PAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPG 72
>AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease
serine 6 protein.
Length = 558
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 25 PRNGSMEGGTQVALPPG---PAQQSPRGAPPGAFSGG 126
P S + PPG PAQ SP G PPG S G
Sbjct: 36 PAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPG 72
>AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
Length = 491
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 25 PRNGSMEGGTQVALPPG---PAQQSPRGAPPGAFSGG 126
P S + PPG PAQ SP G PPG S G
Sbjct: 36 PAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPG 72
>AB048797-1|BAB39742.2| 537|Homo sapiens mosaic serine protease
protein.
Length = 537
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 25 PRNGSMEGGTQVALPPG---PAQQSPRGAPPGAFSGG 126
P S + PPG PAQ SP G PPG S G
Sbjct: 36 PAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPG 72
>AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic
serine protease protein.
Length = 581
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Frame = +1
Query: 25 PRNGSMEGGTQVALPPG---PAQQSPRGAPPGAFSGG 126
P S + PPG PAQ SP G PPG S G
Sbjct: 36 PAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPG 72
>U48252-1|AAC72246.1| 457|Homo sapiens protein kinase C-binding
protein RACK8 protein.
Length = 457
Score = 29.5 bits (63), Expect = 4.7
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 46 GGTQVALPPGPAQQSPRGAPPGAFSG 123
G + +PP PA P GAPPG G
Sbjct: 411 GPPMLMMPPPPAAMGPPGAPPGRDPG 436
>U75651-1|AAB84228.1| 716|Homo sapiens dishevelled 3 protein.
Length = 716
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 46 GGTQVALPPGPAQQSPRGAPPG 111
G + +PP PA P GAPPG
Sbjct: 663 GPPMLMMPPPPAAMGPPGAPPG 684
>U49262-1|AAB47447.1| 716|Homo sapiens dishevelled protein.
Length = 716
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 46 GGTQVALPPGPAQQSPRGAPPG 111
G + +PP PA P GAPPG
Sbjct: 663 GPPMLMMPPPPAAMGPPGAPPG 684
>BC113524-1|AAI13525.1| 578|Homo sapiens IFT74 protein protein.
Length = 578
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPG 111
R +G+ P +G++ T A+PPG A+ RG P G
Sbjct: 1 RPPSGIRPLSGNIRVAT--AMPPGTARPGSRGCPIG 34
>BC107742-1|AAI07743.1| 372|Homo sapiens IFT74 protein protein.
Length = 372
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPG 111
R +G+ P +G++ T A+PPG A+ RG P G
Sbjct: 23 RPPSGIRPLSGNIRVAT--AMPPGTARPGSRGCPIG 56
>BC090853-1|AAH90853.1| 289|Homo sapiens HOXD8 protein protein.
Length = 289
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPP 108
RG HP GS Q A PP P P PP
Sbjct: 89 RGQEYFHPGGGSPAAAYQAAPPPPPHPPPPPPPPP 123
>BC038709-1|AAH38709.1| 289|Homo sapiens homeobox D8 protein.
Length = 289
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPP 108
RG HP GS Q A PP P P PP
Sbjct: 89 RGQEYFHPGGGSPAAAYQAAPPPPPHPPPPPPPPP 123
>BC032459-1|AAH32459.1| 716|Homo sapiens dishevelled, dsh homolog 3
(Drosophila) protein.
Length = 716
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 46 GGTQVALPPGPAQQSPRGAPPG 111
G + +PP PA P GAPPG
Sbjct: 663 GPPMLMMPPPPAAMGPPGAPPG 684
>BC018289-1|AAH18289.1| 608|Homo sapiens Unknown (protein for
IMAGE:3454067) protein.
Length = 608
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 46 GGTQVALPPGPAQQSPRGAPPG 111
G + +PP PA P GAPPG
Sbjct: 555 GPPMLMMPPPPAAMGPPGAPPG 576
>AY040325-1|AAK77221.1| 600|Homo sapiens capillary morphogenesis
protein-1 protein.
Length = 600
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPG 111
R +G+ P +G++ T A+PPG A+ RG P G
Sbjct: 23 RPPSGIRPLSGNIRVAT--AMPPGTARPGSRGCPIG 56
>AY014304-1|AAG42152.1| 290|Homo sapiens HOXD8 protein.
Length = 290
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPP 108
RG HP GS Q A PP P P PP
Sbjct: 89 RGQEYFHPGGGSPAAAYQAAPPPPPHPPPPPPPPP 123
>AL356133-4|CAH72643.1| 600|Homo sapiens intraflagellar transport
74 homolog (Chlamydomonas) protein.
Length = 600
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPG 111
R +G+ P +G++ T A+PPG A+ RG P G
Sbjct: 23 RPPSGIRPLSGNIRVAT--AMPPGTARPGSRGCPIG 56
>AL110278-1|CAB53713.1| 548|Homo sapiens hypothetical protein
protein.
Length = 548
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 46 GGTQVALPPGPAQQSPRGAPPG 111
G + +PP PA P GAPPG
Sbjct: 495 GPPMLMMPPPPAAMGPPGAPPG 516
>AF006013-1|AAB65244.1| 716|Homo sapiens dishevelled 3 protein.
Length = 716
Score = 29.1 bits (62), Expect = 6.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +1
Query: 46 GGTQVALPPGPAQQSPRGAPPG 111
G + +PP PA P GAPPG
Sbjct: 663 GPPMLMMPPPPAAMGPPGAPPG 684
>Z83844-2|CAB63037.1| 274|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 274
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 69 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 101
>Z83844-1|CAI20369.1| 639|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 639
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 434 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 466
>CR456493-1|CAG30379.1| 656|Homo sapiens GGA1 protein.
Length = 656
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 451 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 483
>BC082760-1|AAH82760.1| 1062|Homo sapiens ATXN2L protein protein.
Length = 1062
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 49 GTQVALPPGPAQQSPRGAPP 108
GT +LPPGP+ QSP+ + P
Sbjct: 921 GTPPSLPPGPSAQSPQSSFP 940
>BC068012-1|AAH68012.1| 1098|Homo sapiens ATXN2L protein protein.
Length = 1098
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 49 GTQVALPPGPAQQSPRGAPP 108
GT +LPPGP+ QSP+ + P
Sbjct: 944 GTPPSLPPGPSAQSPQSSFP 963
>BC044629-1|AAH44629.1| 552|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 552
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 347 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 379
>BC016967-1|AAH16967.2| 545|Homo sapiens RNA pseudouridylate
synthase domain containing 2 protein.
Length = 545
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
G H +NG G +V L PGP + + R P G
Sbjct: 48 GLRASHQQNGDAGGDAKVELSPGPPKPAGREVEPAPVGG 86
>BC016064-1|AAH16064.1| 148|Homo sapiens proline rich 13 protein.
Length = 148
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 110 PGGAPRGDCCAGPGGRATCVPPSILPLRGCIPLSP 6
P GAP G+ PGG VP P GC PL P
Sbjct: 44 PPGAPHGNPAFPPGGPPHPVPQPGYP--GCQPLGP 76
>BC014257-1|AAH14257.1| 148|Homo sapiens proline rich 13 protein.
Length = 148
Score = 28.7 bits (61), Expect = 8.2
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = -3
Query: 110 PGGAPRGDCCAGPGGRATCVPPSILPLRGCIPLSP 6
P GAP G+ PGG VP P GC PL P
Sbjct: 44 PPGAPHGNPAFPPGGPPHPVPQPGYP--GCQPLGP 76
>BC010239-1|AAH10239.1| 401|Homo sapiens ATXN2L protein protein.
Length = 401
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 49 GTQVALPPGPAQQSPRGAPP 108
GT +LPPGP+ QSP+ + P
Sbjct: 247 GTPPSLPPGPSAQSPQSSFP 266
>BC007697-1|AAH07697.1| 554|Homo sapiens RPUSD2 protein protein.
Length = 554
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
G H +NG G +V L PGP + + R P G
Sbjct: 57 GLRASHQQNGDAGGDAKVELSPGPPKPAGREVEPAPVGG 95
>BC000538-1|AAH00538.2| 365|Homo sapiens GGA1 protein protein.
Length = 365
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 160 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 192
>AL035496-1|CAI20951.1| 639|Homo sapiens golgi associated, gamma
adaptin ear containing, ARF binding protein 1 protein.
Length = 639
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 434 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 466
>AK075256-1|BAC11501.1| 639|Homo sapiens protein ( Homo sapiens
cDNA FLJ90775 fis, clone THYRO1001071, highly similar to
ADP-ribosylation factor binding protein GGA1. ).
Length = 639
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 434 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 466
>AK055971-1|BAB71059.1| 545|Homo sapiens protein ( Homo sapiens
cDNA FLJ31409 fis, clone NT2NE2000174. ).
Length = 545
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
G H +NG G +V L PGP + + R P G
Sbjct: 48 GLRASHQQNGDAGGDAKVELSPGPPKPAGREVEPAPVGG 86
>AJ317974-1|CAC38072.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 49 GTQVALPPGPAQQSPRGAPP 108
GT +LPPGP+ QSP+ + P
Sbjct: 921 GTPPSLPPGPSAQSPQSSFP 940
>AJ317973-1|CAC38071.3| 1044|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1044
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 49 GTQVALPPGPAQQSPRGAPP 108
GT +LPPGP+ QSP+ + P
Sbjct: 921 GTPPSLPPGPSAQSPQSSFP 940
>AJ317972-1|CAC38070.3| 1097|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1097
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 49 GTQVALPPGPAQQSPRGAPP 108
GT +LPPGP+ QSP+ + P
Sbjct: 921 GTPPSLPPGPSAQSPQSSFP 940
>AJ317971-1|CAC38069.3| 1062|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1062
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 49 GTQVALPPGPAQQSPRGAPP 108
GT +LPPGP+ QSP+ + P
Sbjct: 921 GTPPSLPPGPSAQSPQSSFP 940
>AJ317970-1|CAC38068.1| 1075|Homo sapiens ataxin-2 related domain
protein protein.
Length = 1075
Score = 28.7 bits (61), Expect = 8.2
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +1
Query: 49 GTQVALPPGPAQQSPRGAPP 108
GT +LPPGP+ QSP+ + P
Sbjct: 921 GTPPSLPPGPSAQSPQSSFP 940
>AF233521-1|AAF35393.1| 639|Homo sapiens gamma-adaptin related
protein, GGA1 protein.
Length = 639
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 434 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 466
>AF218584-1|AAF42847.1| 639|Homo sapiens GGA1 protein.
Length = 639
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 434 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 466
>AF190862-1|AAF05707.1| 639|Homo sapiens ADP-ribosylation factor
binding protein GGA1 protein.
Length = 639
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 280 NLPHKSSPYRFSWQQRTTRFGVRTIQKTSSTCT 378
+LP +S R+ QQ T R +R +Q SS+C+
Sbjct: 434 SLPPESQQVRWEKQQPTPRLTLRDLQNKSSSCS 466
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,314,580
Number of Sequences: 237096
Number of extensions: 946637
Number of successful extensions: 4916
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 4359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4908
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3144905170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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