Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M21
(418 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical ... 29 1.4
Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 28 3.1
AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively... 28 3.1
AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively... 28 3.1
AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively... 28 3.1
X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein. 27 4.1
U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled re... 27 4.1
U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled re... 27 4.1
U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter... 27 4.1
EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of g... 27 4.1
AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical ... 27 4.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 27 5.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 7.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 7.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 7.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 7.2
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 26 9.5
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 26 9.5
AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical... 26 9.5
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 26 9.5
>AC025722-2|AAK68508.1| 605|Caenorhabditis elegans Hypothetical
protein Y50D4C.3 protein.
Length = 605
Score = 29.1 bits (62), Expect = 1.4
Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Frame = +1
Query: 25 PRNGSMEGGTQVA-LPPGPAQQSPRG 99
PR G GG+Q PP P+Q PRG
Sbjct: 479 PRGGQFHGGSQQGPPPPPPSQHHPRG 504
>Z50029-6|CAD57714.1| 1072|Caenorhabditis elegans Hypothetical
protein ZC504.4d protein.
Length = 1072
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 236 SRPLILVHRLITGLLIYPTNPHLIDLAGSREQRGSAFELYRKPQAHAQY 382
SRP + H + +P PHL DLA ++R S E R+ + A +
Sbjct: 411 SRPRPVSHHQRSPQQSHPAAPHLADLANYEKRRRSEREERRERERQAHH 459
>Z50029-5|CAC42384.1| 1096|Caenorhabditis elegans Hypothetical
protein ZC504.4c protein.
Length = 1096
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 236 SRPLILVHRLITGLLIYPTNPHLIDLAGSREQRGSAFELYRKPQAHAQY 382
SRP + H + +P PHL DLA ++R S E R+ + A +
Sbjct: 426 SRPRPVSHHQRSPQQSHPAAPHLADLANYEKRRRSEREERRERERQAHH 474
>Z50029-3|CAB63416.1| 1087|Caenorhabditis elegans Hypothetical
protein ZC504.4a protein.
Length = 1087
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 236 SRPLILVHRLITGLLIYPTNPHLIDLAGSREQRGSAFELYRKPQAHAQY 382
SRP + H + +P PHL DLA ++R S E R+ + A +
Sbjct: 426 SRPRPVSHHQRSPQQSHPAAPHLADLANYEKRRRSEREERRERERQAHH 474
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 34 GSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
G GG Q PPGP Q R PG F G
Sbjct: 152 GPSPGGPQ---PPGPGQPQMRPGQPGMFQG 178
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +1
Query: 34 GSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
G GG Q PPGP Q R PG F G
Sbjct: 152 GPSPGGPQ---PPGPGQPQMRPGQPGMFQG 178
>AF087133-1|AAD14595.1| 728|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 728
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 236 SRPLILVHRLITGLLIYPTNPHLIDLAGSREQRGSAFELYRKPQAHAQY 382
SRP + H + +P PHL DLA ++R S E R+ + A +
Sbjct: 58 SRPRPVSHHQRSPQQSHPAAPHLADLANYEKRRRSEREERRERERQAHH 106
>AF087132-1|AAD14594.1| 792|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 792
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 236 SRPLILVHRLITGLLIYPTNPHLIDLAGSREQRGSAFELYRKPQAHAQY 382
SRP + H + +P PHL DLA ++R S E R+ + A +
Sbjct: 131 SRPRPVSHHQRSPQQSHPAAPHLADLANYEKRRRSEREERRERERQAHH 179
>AF087131-1|AAD14593.1| 1087|Caenorhabditis elegans alternatively
spliced serine/threonineprotein kinase MIG-15 protein.
Length = 1087
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 236 SRPLILVHRLITGLLIYPTNPHLIDLAGSREQRGSAFELYRKPQAHAQY 382
SRP + H + +P PHL DLA ++R S E R+ + A +
Sbjct: 426 SRPRPVSHHQRSPQQSHPAAPHLADLANYEKRRRSEREERRERERQAHH 474
>X64435-1|CAA45773.1| 318|Caenorhabditis elegans collagen protein.
Length = 318
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAF 117
G NG+ +N G PPGP PPG F
Sbjct: 230 GSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPF 266
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 4 RGDNGMH-PRNGSMEGGTQVALPPG-PAQQSPRGAPPGA 114
+G+ G+ P GGT + PPG P + P+G PPG+
Sbjct: 194 QGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKG-PPGS 231
>U46753-11|AAM98048.1| 425|Caenorhabditis elegans Dishevelled
related protein 1,isoform b protein.
Length = 425
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
G NGM NGS V LPP P PPGAF G
Sbjct: 375 GMNGMSAGNGS-----SVMLPP-PHLPGGMAGPPGAFKG 407
>U46753-10|AAM98049.1| 623|Caenorhabditis elegans Dishevelled
related protein 1,isoform c protein.
Length = 623
Score = 27.5 bits (58), Expect = 4.1
Identities = 18/39 (46%), Positives = 18/39 (46%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAFSG 123
G NGM NGS V LPP P PPGAF G
Sbjct: 507 GMNGMSAGNGS-----SVMLPP-PHLPGGMAGPPGAFKG 539
>U41624-3|AAF99944.1| 318|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 7 protein.
Length = 318
Score = 27.5 bits (58), Expect = 4.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = +1
Query: 7 GDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGAF 117
G NG+ +N G PPGP PPG F
Sbjct: 230 GSNGLPSQNSGPPGPIGEMGPPGPPGPRGEPGPPGPF 266
Score = 26.6 bits (56), Expect = 7.2
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = +1
Query: 4 RGDNGMH-PRNGSMEGGTQVALPPG-PAQQSPRGAPPGA 114
+G+ G+ P GGT + PPG P + P+G PPG+
Sbjct: 194 QGEPGIKGPPGDDSIGGTGIKGPPGPPGPRGPKG-PPGS 231
>EF378622-1|ABN54457.1| 1492|Caenorhabditis elegans enhancer of glp-1
protein.
Length = 1492
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +1
Query: 25 PRNGSMEGGTQVALPP----GPAQQSPRGAPPGAFSG 123
P G E ALPP P Q P GA PGA G
Sbjct: 1127 PPGGQFEAHGAAALPPTSHGAPTPQGPFGAAPGAQFG 1163
>AL117201-3|CAL64007.1| 1512|Caenorhabditis elegans Hypothetical
protein Y53H1C.2a protein.
Length = 1512
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +1
Query: 25 PRNGSMEGGTQVALPP----GPAQQSPRGAPPGAFSG 123
P G E ALPP P Q P GA PGA G
Sbjct: 1147 PPGGQFEAHGAAALPPTSHGAPTPQGPFGAAPGAQFG 1183
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 27.1 bits (57), Expect = 5.5
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 67 PPGPAQQSPRGAPPGAF 117
P GPA +P G PPG F
Sbjct: 553 PSGPAGPAPSGEPPGPF 569
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = -3
Query: 110 PGGAPRGDCCAGPGGRATCVPPSILPLRGCIPLSP 6
P P CC A C PP P C P P
Sbjct: 91 PPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPP 125
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPP 108
RG PR S E P GP + P G+PP
Sbjct: 383 RGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPP 417
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPP 108
RG PR S E P GP + P G+PP
Sbjct: 404 RGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPP 438
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPP 108
RG PR S E P GP + P G+PP
Sbjct: 389 RGGPRGGPRKSSEESSESREEPRGPRRSPPTGSPP 423
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 67 PPGPAQQSPRGAPPGAFSGG 126
PPG P PPG F GG
Sbjct: 764 PPGGCPPPPPPPPPGGFKGG 783
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 67 PPGPAQQSPRGAPPGAFSGG 126
PPG P PPG F GG
Sbjct: 764 PPGGCPPPPPPPPPGGFKGG 783
>AL132952-24|CAB61143.2| 351|Caenorhabditis elegans Hypothetical
protein Y51H4A.9 protein.
Length = 351
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = +1
Query: 4 RGDNGMHPRNGSMEGGTQVALPPGPAQQSPRGAPPGA 114
+G +G P GG+ + PPGPA R PG+
Sbjct: 222 KGPSGA-PGAPGQSGGSALPGPPGPAGSPGRSGQPGS 257
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 26.2 bits (55), Expect = 9.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 67 PPGPAQQSPRGAPPGAFSGG 126
PPG P PPG F GG
Sbjct: 347 PPGGCPPPPPPPPPGGFKGG 366
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,995,292
Number of Sequences: 27780
Number of extensions: 131973
Number of successful extensions: 639
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 543
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 636
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -