Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M20
(592 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 338 2e-93
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 338 2e-93
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 338 2e-93
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 338 2e-93
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 338 2e-93
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 338 2e-93
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 337 4e-93
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 335 1e-92
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 333 6e-92
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 308 2e-84
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 254 5e-68
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 214 5e-56
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 177 4e-45
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 177 4e-45
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 176 8e-45
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 171 4e-43
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 168 3e-42
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 141 4e-34
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 97 6e-21
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 51 5e-07
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 34 0.087
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 33 0.20
U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protei... 30 1.4
U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir relat... 29 3.3
AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical ... 28 4.3
AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical ... 28 5.7
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 27 7.5
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 7.5
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 7.5
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 7.5
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 7.5
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 7.5
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 10.0
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 27 10.0
AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain (... 27 10.0
AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain (... 27 10.0
AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain (... 27 10.0
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 338 bits (830), Expect = 2e-93
Identities = 157/162 (96%), Positives = 159/162 (98%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIM 464
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PKANRE MTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 465 FETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
FETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGDGV+HTVPI
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 338 bits (830), Expect = 2e-93
Identities = 157/162 (96%), Positives = 159/162 (98%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIM 464
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PKANRE MTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 465 FETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
FETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGDGV+HTVPI
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 338 bits (830), Expect = 2e-93
Identities = 157/162 (96%), Positives = 159/162 (98%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIM 464
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PKANRE MTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 465 FETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
FETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGDGV+HTVPI
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 338 bits (830), Expect = 2e-93
Identities = 157/162 (96%), Positives = 159/162 (98%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIM 464
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PKANRE MTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 465 FETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
FETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGDGV+HTVPI
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 338 bits (830), Expect = 2e-93
Identities = 157/162 (96%), Positives = 159/162 (98%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIM 464
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PKANRE MTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 465 FETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
FETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGDGV+HTVPI
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 338 bits (830), Expect = 2e-93
Identities = 157/162 (96%), Positives = 159/162 (98%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIM 464
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PKANRE MTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 465 FETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
FETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGDGV+HTVPI
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPI 166
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 337 bits (828), Expect = 4e-93
Identities = 157/162 (96%), Positives = 159/162 (98%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIM 464
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PKANRE MTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 465 FETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
FETFNTPAMYVAIQAVLSLYA GRTTGIVLDSGDGV+HTVPI
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPI 166
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 335 bits (824), Expect = 1e-92
Identities = 155/162 (95%), Positives = 159/162 (98%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
+VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 DVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIM 464
ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PKANRE MTQIM
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIM 124
Query: 465 FETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
FETFNTPAMYVAIQAVLSLYA GRTTGIVLDSGDGV+HTVPI
Sbjct: 125 FETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPI 166
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 333 bits (818), Expect = 6e-92
Identities = 153/163 (93%), Positives = 159/163 (97%)
Frame = +3
Query: 102 KEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 281
+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR
Sbjct: 3 EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 62
Query: 282 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQI 461
GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPL PK+NRE MTQI
Sbjct: 63 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREKMTQI 122
Query: 462 MFETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
MFETFNTPAMYV IQAVLSLYA GRTTGIVLD+GDGV+HTVPI
Sbjct: 123 MFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPI 165
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 308 bits (756), Expect = 2e-84
Identities = 142/148 (95%), Positives = 145/148 (97%)
Frame = +3
Query: 147 KAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 326
+AGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVT 64
Query: 327 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIMFETFNTPAMYVAIQ 506
NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL PKANRE MTQIMFETFNTPAMYVAIQ
Sbjct: 65 NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQ 124
Query: 507 AVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
AVLSLYA GRTTG+VLDSGDGV+HTVPI
Sbjct: 125 AVLSLYASGRTTGVVLDSGDGVTHTVPI 152
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 254 bits (621), Expect = 5e-68
Identities = 117/122 (95%), Positives = 119/122 (97%)
Frame = +3
Query: 225 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 404
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 405 LLTEAPLKPKANRETMTQIMFETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTV 584
LLTEAPL PKANRE MTQIMFETFNTPAMYVAIQAVLSLYA GRTTG+VLDSGDGV+HTV
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 585 PI 590
PI
Sbjct: 121 PI 122
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 214 bits (522), Expect = 5e-56
Identities = 94/159 (59%), Positives = 123/159 (77%), Gaps = 1/159 (0%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 296
+V+DNGSG+ KAGFAG+ P+ F + VGRP++ VM G D ++G +A+S RG+ ++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKYHRVMAGGLDGDIFIGPKAESNRGLFSI 70
Query: 297 KYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLKPKANRETMTQIMFET 473
+YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APL P NRE +I FET
Sbjct: 71 EYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRERSAEIFFET 130
Query: 474 FNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
FN PA+Y+ +QAVLSLYA GRTTG+VLDSGDGV+H VPI
Sbjct: 131 FNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPI 169
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 177 bits (432), Expect = 4e-45
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKI 350
ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 177 bits (432), Expect = 4e-45
Identities = 82/82 (100%), Positives = 82/82 (100%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKI 350
ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 176 bits (429), Expect = 8e-45
Identities = 81/82 (98%), Positives = 82/82 (100%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDMEKI 350
ILTLKYPIEHGIVTNWDDMEKI
Sbjct: 65 ILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 171 bits (415), Expect = 4e-43
Identities = 78/79 (98%), Positives = 79/79 (100%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 284
+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG
Sbjct: 5 DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 64
Query: 285 ILTLKYPIEHGIVTNWDDM 341
ILTLKYPIEHGIVTNWDDM
Sbjct: 65 ILTLKYPIEHGIVTNWDDM 83
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 168 bits (408), Expect = 3e-42
Identities = 82/161 (50%), Positives = 111/161 (68%), Gaps = 3/161 (1%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVM-VGMGQ-KDSYVGDEAQSKRGIL 290
+VVDNG+G K G+AG + P +FPS+VGRP + VG + KD VG+E R +L
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRPIVRSTQRVGNIEIKDLMVGEECSQLRQML 68
Query: 291 TLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLKPKANRETMTQIMF 467
+ YP+++GIV NWDDM +W HTF E L + P+E +LLTE PL P +NRE M Q+MF
Sbjct: 69 DINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMFQVMF 128
Query: 468 ETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
E + ++YVA+QAVL+LYA G TG+V+DSGDGV+H P+
Sbjct: 129 EQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGDGVTHICPV 169
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 141 bits (341), Expect = 4e-34
Identities = 77/183 (42%), Positives = 105/183 (57%), Gaps = 21/183 (11%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSI------VGRPRHQG------VMVGMGQKD 248
++ A V+DNG+G K G+AG+ P+ + PS V Q V G+ D
Sbjct: 5 QLPACVIDNGTGYTKLGYAGNTEPQFIIPSAIAVKDKVASSNSQAMRWNNRVGAGIDDLD 64
Query: 249 SYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 425
++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PL
Sbjct: 65 FFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPL 124
Query: 426 KPKANRETMTQIMFETFNTPAMYVAIQAVLSLYAFGRT--------TGIVLDSGDGVSHT 581
NRE +IMFE+FN P +Y+A+QAVL+L A + TG+V+DSGDGV+H
Sbjct: 125 NTPENREYTAEIMFESFNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHC 184
Query: 582 VPI 590
+P+
Sbjct: 185 IPV 187
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 97.5 bits (232), Expect = 6e-21
Identities = 62/179 (34%), Positives = 93/179 (51%), Gaps = 17/179 (9%)
Frame = +3
Query: 105 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEA--QSK 278
EV+ LV D GS + GFAG++ P+ PS + Q+ GD + Q+K
Sbjct: 10 EVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYIAVQEALPDDTIEKQEAMEEGDNSKVQTK 69
Query: 279 R------GILTLKYP---------IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 413
R G + P ++ G++ +W+ EKI H++ N L P EHPVL +
Sbjct: 70 REKNFFIGTTKIIVPRARTNMESFMKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFS 129
Query: 414 EAPLKPKANRETMTQIMFETFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
E+ +A RE +T+IMFE F PA Y++ VLS +A GRT G+++DSG + VP+
Sbjct: 130 ESSWNDRARREKLTEIMFEKFQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPV 188
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 51.2 bits (117), Expect = 5e-07
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +3
Query: 108 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 287
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 288 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIMF 467
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 468 ETF 476
+ F
Sbjct: 116 DYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 51.2 bits (117), Expect = 5e-07
Identities = 34/123 (27%), Positives = 58/123 (47%)
Frame = +3
Query: 108 VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGI 287
+ ++ DNG K G ++PR V SIV + +H+ V + + +E K +
Sbjct: 3 LTTIIFDNGGHNMKIGTIDSESPRLVPNSIV-KAKHEKKRVFVAHEQ----EECSDKFSL 57
Query: 288 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIMF 467
++ PIE G V NWD ++IW TF + V + LT+ A + ++I+F
Sbjct: 58 FYVR-PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILF 115
Query: 468 ETF 476
+ F
Sbjct: 116 DYF 118
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 43.2 bits (97), Expect = 1e-04
Identities = 42/160 (26%), Positives = 68/160 (42%), Gaps = 2/160 (1%)
Frame = +3
Query: 117 LVVDNGSGMCKAGFAGDDA--PRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 290
L+++ GS +AG + P++ FP+I R + VG + R I
Sbjct: 181 LILELGSCSIRAGVLTTEPSLPQSFFPAIAVRTDDGKIFVGEDAYRPEIRHNGDFVRPIS 240
Query: 291 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRETMTQIMFE 470
+E + D+ K EL+V P ++ VLL+ P + QI E
Sbjct: 241 ATDPSVERYSIDK--DVLKAVIGKVTKELKVEPWKYKVLLSIPQNIPTVLIGELLQICLE 298
Query: 471 TFNTPAMYVAIQAVLSLYAFGRTTGIVLDSGDGVSHTVPI 590
+ + Q L LYA+ TTG+V+D G+ V + VP+
Sbjct: 299 DIKFQSAGITRQPSLILYAYDVTTGVVVDIGERV-NIVPV 337
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 33.9 bits (74), Expect = 0.087
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = -1
Query: 238 PMPTMTPW*RGRPTIEGNTARGASSPAKPALHIPDPL 128
P T TP RGRP I + ++ P P PDPL
Sbjct: 336 PPATQTPRSRGRPRIHSSASKKTEKPETPRAESPDPL 372
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 571 TPSPESSTIPVVRPNAYSESTAWIATYMAGVL 476
TP P SST+PVV P+ ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>U42439-7|AAA83511.1| 304|Caenorhabditis elegans Collagen protein
110 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.4
Identities = 10/16 (62%), Positives = 13/16 (81%)
Frame = +2
Query: 200 GATSSPGRHGRHGSEG 247
G + +PGRHGRHG+ G
Sbjct: 109 GPSGTPGRHGRHGAPG 124
>U97193-7|AAK68163.1| 299|Caenorhabditis elegans Yeast sir related
protein 2.4 protein.
Length = 299
Score = 28.7 bits (61), Expect = 3.3
Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +3
Query: 258 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKA 437
G + K TL + E + + D + K W T + L + + + PL K+
Sbjct: 183 GRSCRGKLRDATLDWDTEISL-NHLDRIRKAWKQTSHL-LCIGTSLEIIPMGSLPLDAKS 240
Query: 438 NRETMTQIMF-ETFNTPAMYVAIQA--VLSLYAFGRTTGIVLDSGDGVSHTVPI 590
T I + ET + + AI A L LY+ G+ +D GD + VPI
Sbjct: 241 KGIKTTTINYQETAHEKIVETAIHADVKLILYSLCNALGVNVDLGDDLPDEVPI 294
>AF125964-1|AAD14753.1| 471|Caenorhabditis elegans Hypothetical
protein W03G1.5 protein.
Length = 471
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/51 (39%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +2
Query: 200 GATSSPGRHGRHGSEGLLRR**G-TEQEGYPHTQIPH----RTRHRHQLGR 337
G PGRHGRHGS R G + G PH H H H GR
Sbjct: 358 GPPHCPGRHGRHGSRSHSPRGHGHGGRHGPPHCPGRHGHHGPPHHHHHDGR 408
>AF025453-5|AAY55851.1| 279|Caenorhabditis elegans Hypothetical
protein C08F1.11 protein.
Length = 279
Score = 27.9 bits (59), Expect = 5.7
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = +3
Query: 147 KAGFAGDDAPRAVFPSIVGRPRHQG 221
KA + G D P+A F I+G ++G
Sbjct: 44 KASYLGHDTPQATFREIIGNKEYRG 68
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical
protein F36F2.3a protein.
Length = 1128
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 383 SSRGAPSLAHRSSPQAQSQQRDDDTDYVRDLQHT-RHVRSYPGRALTVRVRSYHR 544
SS+ S+ +A +RD D D RD + R VRS GR+ ++ S HR
Sbjct: 531 SSKKRRSVEKERPRRADEHRRDRDRDRERDRDRSHRDVRS-SGRSKDIKASSSHR 584
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 211 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSFV 98
R P +E + +SSPA P++ P P +T++ +TS +
Sbjct: 641 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSSI 676
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 211 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSFV 98
R P +E + +SSPA P++ P P +T++ +TS +
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSSI 677
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 211 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSFV 98
R P +E + +SSPA P++ P P +T++ +TS +
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSSI 677
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -1
Query: 211 RGRPTIEGNTARGASSPAKPALHIPDPLSTTNAATSFV 98
R P +E + +SSPA P++ P P +T++ +TS +
Sbjct: 642 RAHPEVEQPVS--SSSPATPSISGPPPCATSSGSTSSI 677
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +2
Query: 536 YHRYRAGFRRWCIP 577
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 413 RSSPQAQSQQRDDDTDYVRD 472
RSSPQ QS++ DD D V D
Sbjct: 30 RSSPQRQSKESDDQEDSVVD 49
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 300 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 401
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 300 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 401
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 413 RSSPQAQSQQRDDDTDYVRD 472
RSSPQ QS++ DD D V D
Sbjct: 30 RSSPQRQSKESDDQEDSVVD 49
>AF099923-3|AAN63403.1| 784|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform c protein.
Length = 784
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 294 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRE 446
L Y + + N DM+ N +R A EE + + + P +PK++R+
Sbjct: 130 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-2|AAM48544.1| 814|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform a protein.
Length = 814
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 294 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRE 446
L Y + + N DM+ N +R A EE + + + P +PK++R+
Sbjct: 130 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 180
>AF099923-1|AAM48545.1| 853|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 8,
isoform b protein.
Length = 853
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 294 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLKPKANRE 446
L Y + + N DM+ N +R A EE + + + P +PK++R+
Sbjct: 169 LLYANDQILEVNGLDMQNETKDNVVNAVRAAKEELQITVQQLPQRPKSSRK 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,743,234
Number of Sequences: 27780
Number of extensions: 332615
Number of successful extensions: 1252
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1157
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1240
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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