Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_M18
         (237 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    21   4.6  
AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome convers...    21   6.0  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    21   6.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          21   8.0  

>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 21.4 bits (43), Expect = 4.6
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 14  VEGTCPFPGCGYEDARG 64
           V G  PFPG  Y    G
Sbjct: 220 VMGEVPFPGIAYRKGHG 236


>AJ459959-1|CAD31058.1|  462|Anopheles gambiae dopachrome conversion
           enzyme protein.
          Length = 462

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/36 (22%), Positives = 13/36 (36%)
 Frame = +2

Query: 29  PFPGCGYEDARGDQCDKCGKLINAIELIRPRCKSLW 136
           P+P     + R D      +++        RC  LW
Sbjct: 97  PYPNFALNELRADLQPDANRIVTVYRPRVDRCDRLW 132


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +2

Query: 41  CGYEDARGDQCDKCGK 88
           C +  A GD CD+C K
Sbjct: 745 CQHNTA-GDTCDQCAK 759


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 20.6 bits (41), Expect = 8.0
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 20  GTCPFPGCGYEDARGDQ 70
           GT  +PG GY+  +  Q
Sbjct: 115 GTMNYPGMGYQQQQQQQ 131


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,568
Number of Sequences: 2352
Number of extensions: 2720
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 52
effective length of database: 441,675
effective search space used: 11483550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)