Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M18
(237 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 25 0.17
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 25 0.17
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 25 0.17
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 21 2.0
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 20 3.6
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 20 3.6
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 20 3.6
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 20 3.6
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 20 3.6
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 20 3.6
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 20 3.6
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 3.6
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 3.6
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 3.6
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 3.6
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 3.6
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 3.6
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 3.6
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 3.6
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 3.6
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 20 3.6
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 20 4.7
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 20 4.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 19 6.2
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 19 6.2
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 19 6.2
AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly pro... 19 8.3
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 19 8.3
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 19 8.3
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.17
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 47 YEDARGDQCDKCGKLINAIELIRPRCKSLWALAHCQALANN 169
Y D + D C +++A +L +C LW L L NN
Sbjct: 107 YPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLD--SGLVNN 145
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.17
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 47 YEDARGDQCDKCGKLINAIELIRPRCKSLWALAHCQALANN 169
Y D + D C +++A +L +C LW L L NN
Sbjct: 107 YPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLD--SGLVNN 145
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 24.6 bits (51), Expect = 0.17
Identities = 13/41 (31%), Positives = 19/41 (46%)
Frame = +2
Query: 47 YEDARGDQCDKCGKLINAIELIRPRCKSLWALAHCQALANN 169
Y D + D C +++A +L +C LW L L NN
Sbjct: 107 YPDWSFAKYDDCSGIVSASKLAIDKCDRLWVLD--SGLVNN 145
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 21.0 bits (42), Expect = 2.0
Identities = 6/35 (17%), Positives = 18/35 (51%)
Frame = +2
Query: 68 QCDKCGKLINAIELIRPRCKSLWALAHCQALANNC 172
+C+ C K++ ++ +R +++ + + N C
Sbjct: 4 RCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNIC 38
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 134 PPDMYRLRPPPNPRF 148
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 134 PPDMYRLRPPPNPRF 148
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 134 PPDMYRLRPPPNPRF 148
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 134 PPDMYRLRPPPNPRF 148
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 134 PPDMYRLRPPPNPRF 148
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 134 PPDMYRLRPPPNPRF 148
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 134 PPDMYRLRPPPNPRF 148
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 383 PPDMYRLRPPPNPRF 397
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 383 PPDMYRLRPPPNPRF 397
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 383 PPDMYRLRPPPNPRF 397
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 383 PPDMYRLRPPPNPRF 397
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 383 PPDMYRLRPPPNPRF 397
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 383 PPDMYRLRPPPNPRF 397
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 382 PPDMYRLRPPPNPRF 396
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 367 PPDMYRLRPPPNPRF 381
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 3.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -1
Query: 237 PPTLHRRDPRPDRRF 193
PP ++R P P+ RF
Sbjct: 383 PPDMYRLRPPPNPRF 397
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 20.2 bits (40), Expect = 3.6
Identities = 8/32 (25%), Positives = 15/32 (46%)
Frame = +2
Query: 47 YEDARGDQCDKCGKLINAIELIRPRCKSLWAL 142
Y D + C K+++A ++ + LW L
Sbjct: 108 YPDWSFAEFKDCSKIVSAFKIAIDKFDRLWVL 139
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 19.8 bits (39), Expect = 4.7
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = -2
Query: 233 PPSTVEIHVLI 201
PP+TVE+ +++
Sbjct: 28 PPATVEVDIMV 38
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl
cyclase alpha 1 subunit protein.
Length = 699
Score = 19.8 bits (39), Expect = 4.7
Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 6/20 (30%)
Frame = +2
Query: 26 CPF------PGCGYEDARGD 67
CPF PGC + +RGD
Sbjct: 3 CPFSRDLSKPGCDEQTSRGD 22
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 19.4 bits (38), Expect = 6.2
Identities = 5/8 (62%), Positives = 7/8 (87%)
Frame = -1
Query: 51 SYPHPGKG 28
++PHPG G
Sbjct: 1747 TFPHPGNG 1754
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 19.4 bits (38), Expect = 6.2
Identities = 5/21 (23%), Positives = 10/21 (47%)
Frame = +2
Query: 74 DKCGKLINAIELIRPRCKSLW 136
D C K+ N + ++ +W
Sbjct: 121 DNCNKIYNLAKCVQESAPDVW 141
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 19.4 bits (38), Expect = 6.2
Identities = 5/21 (23%), Positives = 10/21 (47%)
Frame = +2
Query: 74 DKCGKLINAIELIRPRCKSLW 136
D C K+ N + ++ +W
Sbjct: 121 DNCNKIYNLAKCVQESAPDVW 141
>AY398690-1|AAR83734.1| 416|Apis mellifera major royal jelly
protein 8 protein.
Length = 416
Score = 19.0 bits (37), Expect = 8.3
Identities = 8/32 (25%), Positives = 14/32 (43%)
Frame = +2
Query: 47 YEDARGDQCDKCGKLINAIELIRPRCKSLWAL 142
Y D + + C + +A ++ C LW L
Sbjct: 105 YPDWTWAKNENCSGITSAYKIEIDMCDRLWVL 136
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 19.0 bits (37), Expect = 8.3
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = -1
Query: 231 TLHRRDPRPDRRFQLXE 181
TLH +DP+ + F E
Sbjct: 515 TLHFKDPKVESAFHNAE 531
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 19.0 bits (37), Expect = 8.3
Identities = 5/8 (62%), Positives = 6/8 (75%)
Frame = +2
Query: 20 GTCPFPGC 43
G C +PGC
Sbjct: 281 GVCKWPGC 288
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,692
Number of Sequences: 438
Number of extensions: 594
Number of successful extensions: 35
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 3898467
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)
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