Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M16
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical pr... 200 2e-52
X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein. 200 2e-52
Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical pr... 200 3e-52
X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein. 200 3e-52
X04818-1|CAA28504.1| 341|Caenorhabditis elegans glyceraldehyde-... 200 3e-52
X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene prod... 198 1e-51
X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene prod... 198 1e-51
U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd (glyceralde... 198 1e-51
U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd (glyceralde... 198 1e-51
X69016-1|CAA48781.1| 549|Caenorhabditis elegans ced-4 protein. 29 1.7
U21324-2|AAX22294.1| 571|Caenorhabditis elegans Cell death abno... 29 1.7
U21324-1|AAA62564.1| 549|Caenorhabditis elegans Cell death abno... 29 1.7
Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical p... 27 5.1
Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical p... 27 5.1
Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical pr... 27 5.1
Z81040-1|CAB02781.1| 145|Caenorhabditis elegans Hypothetical pr... 27 6.8
>Z48783-3|CAA88697.1| 341|Caenorhabditis elegans Hypothetical
protein F33H1.2 protein.
Length = 341
Score = 200 bits (489), Expect = 2e-52
Identities = 101/129 (78%), Positives = 105/129 (81%), Gaps = 1/129 (0%)
Frame = +3
Query: 21 SADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXX 197
SADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF IIEGLM
Sbjct: 130 SADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTA 189
Query: 198 XXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVANVSVV 377
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP+LNGKLTGMAFRVP +VSVV
Sbjct: 190 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVV 249
Query: 378 DLTVRLGKP 404
DLTVRL KP
Sbjct: 250 DLTVRLEKP 258
>X52673-1|CAA36899.1| 341|Caenorhabditis elegans gpd-4 protein.
Length = 341
Score = 200 bits (489), Expect = 2e-52
Identities = 101/129 (78%), Positives = 105/129 (81%), Gaps = 1/129 (0%)
Frame = +3
Query: 21 SADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXX 197
SADAPM+VVGVN E YD S VISNASCTTNCLAPLAKVI+DNF IIEGLM
Sbjct: 130 SADAPMYVVGVNHEKYDASNDHVISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTA 189
Query: 198 XXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVANVSVV 377
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP+LNGKLTGMAFRVP +VSVV
Sbjct: 190 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVV 249
Query: 378 DLTVRLGKP 404
DLTVRL KP
Sbjct: 250 DLTVRLEKP 258
>Z49070-2|CAA88870.1| 341|Caenorhabditis elegans Hypothetical
protein T09F3.3 protein.
Length = 341
Score = 200 bits (488), Expect = 3e-52
Identities = 100/129 (77%), Positives = 105/129 (81%), Gaps = 1/129 (0%)
Frame = +3
Query: 21 SADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXX 197
SADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF IIEGLM
Sbjct: 130 SADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTA 189
Query: 198 XXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVANVSVV 377
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP+LNGKLTGMAFRVP +VSVV
Sbjct: 190 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVV 249
Query: 378 DLTVRLGKP 404
DLTVRL KP
Sbjct: 250 DLTVRLEKP 258
>X52674-1|CAA36900.1| 341|Caenorhabditis elegans gpd-1 protein.
Length = 341
Score = 200 bits (488), Expect = 3e-52
Identities = 100/129 (77%), Positives = 105/129 (81%), Gaps = 1/129 (0%)
Frame = +3
Query: 21 SADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXX 197
SADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF IIEGLM
Sbjct: 130 SADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTA 189
Query: 198 XXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVANVSVV 377
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP+LNGKLTGMAFRVP +VSVV
Sbjct: 190 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVV 249
Query: 378 DLTVRLGKP 404
DLTVRL KP
Sbjct: 250 DLTVRLEKP 258
>X04818-1|CAA28504.1| 341|Caenorhabditis elegans
glyceraldehyde-3-phosphate dehydrogenaseprotein.
Length = 341
Score = 200 bits (488), Expect = 3e-52
Identities = 100/129 (77%), Positives = 105/129 (81%), Gaps = 1/129 (0%)
Frame = +3
Query: 21 SADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXX 197
SADAPM+VVGVN E YD S V+SNASCTTNCLAPLAKVI+DNF IIEGLM
Sbjct: 130 SADAPMYVVGVNHEKYDASNDHVVSNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTA 189
Query: 198 XXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVANVSVV 377
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP+LNGKLTGMAFRVP +VSVV
Sbjct: 190 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVV 249
Query: 378 DLTVRLGKP 404
DLTVRL KP
Sbjct: 250 DLTVRLEKP 258
>X15254-2|CAA33327.1| 341|Caenorhabditis elegans gpd-3 gene product
protein.
Length = 341
Score = 198 bits (483), Expect = 1e-51
Identities = 99/129 (76%), Positives = 104/129 (80%), Gaps = 1/129 (0%)
Frame = +3
Query: 21 SADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXX 197
SADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF IIEGLM
Sbjct: 130 SADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTA 189
Query: 198 XXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVANVSVV 377
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP+LNGKLTGMAFRVP +VSVV
Sbjct: 190 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVV 249
Query: 378 DLTVRLGKP 404
DLT RL KP
Sbjct: 250 DLTARLEKP 258
>X15254-1|CAA33326.1| 341|Caenorhabditis elegans gpd-2 gene product
protein.
Length = 341
Score = 198 bits (483), Expect = 1e-51
Identities = 99/129 (76%), Positives = 104/129 (80%), Gaps = 1/129 (0%)
Frame = +3
Query: 21 SADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXX 197
SADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF IIEGLM
Sbjct: 130 SADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTA 189
Query: 198 XXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVANVSVV 377
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP+LNGKLTGMAFRVP +VSVV
Sbjct: 190 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVV 249
Query: 378 DLTVRLGKP 404
DLT RL KP
Sbjct: 250 DLTARLEKP 258
>U49941-6|AAB53874.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 2
protein.
Length = 341
Score = 198 bits (483), Expect = 1e-51
Identities = 99/129 (76%), Positives = 104/129 (80%), Gaps = 1/129 (0%)
Frame = +3
Query: 21 SADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXX 197
SADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF IIEGLM
Sbjct: 130 SADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTA 189
Query: 198 XXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVANVSVV 377
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP+LNGKLTGMAFRVP +VSVV
Sbjct: 190 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVV 249
Query: 378 DLTVRLGKP 404
DLT RL KP
Sbjct: 250 DLTARLEKP 258
>U49941-5|AAB53869.1| 341|Caenorhabditis elegans Gpd
(glyceraldehyde 3-phosphatedehydrogenase) protein 3
protein.
Length = 341
Score = 198 bits (483), Expect = 1e-51
Identities = 99/129 (76%), Positives = 104/129 (80%), Gaps = 1/129 (0%)
Frame = +3
Query: 21 SADAPMFVVGVNLEAYDPSYK-VISNASCTTNCLAPLAKVIHDNFEIIEGLMXXXXXXXX 197
SADAPMFVVGVN E YD + +ISNASCTTNCLAPLAKVI+DNF IIEGLM
Sbjct: 130 SADAPMFVVGVNHEKYDHANDHIISNASCTTNCLAPLAKVINDNFGIIEGLMTTVHAVTA 189
Query: 198 XXXXXDGPSGKLWRDGRGAQQNIIPASTGAAKAVGKVIPQLNGKLTGMAFRVPVANVSVV 377
DGPSGKLWRDGRGA QNIIPASTGAAKAVGKVIP+LNGKLTGMAFRVP +VSVV
Sbjct: 190 TQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPDVSVV 249
Query: 378 DLTVRLGKP 404
DLT RL KP
Sbjct: 250 DLTARLEKP 258
>X69016-1|CAA48781.1| 549|Caenorhabditis elegans ced-4 protein.
Length = 549
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = -2
Query: 260 LLSPTAIAPQFSRRSINS--LLGG-SSGMHCSHQTFNNFKVV--VDDLCE 126
LL P IAPQFSR+ ++ LLG M C + ++ +V+ +D++C+
Sbjct: 100 LLRPVVIAPQFSRQMLDRKLLLGNVPKQMTCYIREYHVDRVIKKLDEMCD 149
>U21324-2|AAX22294.1| 571|Caenorhabditis elegans Cell death
abnormality protein4, isoform b protein.
Length = 571
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = -2
Query: 260 LLSPTAIAPQFSRRSINS--LLGG-SSGMHCSHQTFNNFKVV--VDDLCE 126
LL P IAPQFSR+ ++ LLG M C + ++ +V+ +D++C+
Sbjct: 100 LLRPVVIAPQFSRQMLDRKLLLGNVPKQMTCYIREYHVDRVIKKLDEMCD 149
>U21324-1|AAA62564.1| 549|Caenorhabditis elegans Cell death
abnormality protein4, isoform a protein.
Length = 549
Score = 28.7 bits (61), Expect = 1.7
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = -2
Query: 260 LLSPTAIAPQFSRRSINS--LLGG-SSGMHCSHQTFNNFKVV--VDDLCE 126
LL P IAPQFSR+ ++ LLG M C + ++ +V+ +D++C+
Sbjct: 100 LLRPVVIAPQFSRQMLDRKLLLGNVPKQMTCYIREYHVDRVIKKLDEMCD 149
>Z81489-14|CAN86572.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 164 RFDDYSACHYCHPEDC*WTFWKTV 235
R DDY AC+ H D + WK V
Sbjct: 111 RNDDYGACNLLHEYDPEYNVWKKV 134
>Z81489-13|CAB04012.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 164 RFDDYSACHYCHPEDC*WTFWKTV 235
R DDY AC+ H D + WK V
Sbjct: 111 RNDDYGACNLLHEYDPEYNVWKKV 134
>Z81087-2|CAN86636.1| 420|Caenorhabditis elegans Hypothetical
protein F53E4.1b protein.
Length = 420
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 164 RFDDYSACHYCHPEDC*WTFWKTV 235
R DDY AC+ H D + WK V
Sbjct: 111 RNDDYGACNLLHEYDPEYNVWKKV 134
>Z81087-1|CAB03122.1| 426|Caenorhabditis elegans Hypothetical
protein F53E4.1a protein.
Length = 426
Score = 27.1 bits (57), Expect = 5.1
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 164 RFDDYSACHYCHPEDC*WTFWKTV 235
R DDY AC+ H D + WK V
Sbjct: 111 RNDDYGACNLLHEYDPEYNVWKKV 134
>Z81040-1|CAB02781.1| 145|Caenorhabditis elegans Hypothetical
protein C26E1.1 protein.
Length = 145
Score = 26.6 bits (56), Expect = 6.8
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = +2
Query: 17 GKC*CSHVCSWCQP 58
G+ CS CSWCQP
Sbjct: 4 GESYCSFHCSWCQP 17
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,320,716
Number of Sequences: 27780
Number of extensions: 183784
Number of successful extensions: 434
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 425
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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