Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_M15
         (543 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071119-1|AAL48741.1|  133|Drosophila melanogaster RE17056p pro...   100   1e-21
AF320758-1|AAG40877.1|  133|Drosophila melanogaster programmed c...   100   1e-21
AE014296-2662|AAF49524.1|  133|Drosophila melanogaster CG13072-P...   100   1e-21

>AY071119-1|AAL48741.1|  133|Drosophila melanogaster RE17056p
           protein.
          Length = 133

 Score =  100 bits (239), Expect = 1e-21
 Identities = 50/116 (43%), Positives = 67/116 (57%)
 Frame = +2

Query: 113 MDDPDLERIXXXXXXXXXXXXXGTGDSNHXXXXXXXXXXXXXXXHSILSQALSQDARARL 292
           M D DL+ +             G  D+                 HSILSQ L Q ARARL
Sbjct: 1   MSDSDLDALRAQRMSQMQSQFGGGNDAEKQQAQQEQMRAQEEMKHSILSQVLDQQARARL 60

Query: 293 NTIKLSRPEKGAMVENMICRMAQMGQVQNRITEQELIQLLESVNQQMPKSTSTVKF 460
           NT+K+S+PEK  M ENM+ RMAQMGQV+ ++ + + + +LESVN QMP+S S+VK+
Sbjct: 61  NTLKVSKPEKAQMFENMVIRMAQMGQVRGKLDDAQFVSILESVNAQMPQSKSSVKY 116


>AF320758-1|AAG40877.1|  133|Drosophila melanogaster programmed cell
           death gene-5 proteinprotein.
          Length = 133

 Score =  100 bits (239), Expect = 1e-21
 Identities = 50/116 (43%), Positives = 67/116 (57%)
 Frame = +2

Query: 113 MDDPDLERIXXXXXXXXXXXXXGTGDSNHXXXXXXXXXXXXXXXHSILSQALSQDARARL 292
           M D DL+ +             G  D+                 HSILSQ L Q ARARL
Sbjct: 1   MSDSDLDALRAQRMSQMQSQFGGGNDAEKQQAQQEQMRAQEEMKHSILSQVLDQQARARL 60

Query: 293 NTIKLSRPEKGAMVENMICRMAQMGQVQNRITEQELIQLLESVNQQMPKSTSTVKF 460
           NT+K+S+PEK  M ENM+ RMAQMGQV+ ++ + + + +LESVN QMP+S S+VK+
Sbjct: 61  NTLKVSKPEKAQMFENMVIRMAQMGQVRGKLDDAQFVSILESVNAQMPQSKSSVKY 116


>AE014296-2662|AAF49524.1|  133|Drosophila melanogaster CG13072-PA
           protein.
          Length = 133

 Score =  100 bits (239), Expect = 1e-21
 Identities = 50/116 (43%), Positives = 67/116 (57%)
 Frame = +2

Query: 113 MDDPDLERIXXXXXXXXXXXXXGTGDSNHXXXXXXXXXXXXXXXHSILSQALSQDARARL 292
           M D DL+ +             G  D+                 HSILSQ L Q ARARL
Sbjct: 1   MSDSDLDALRAQRMSQMQSQFGGGNDAEKQQAQQEQMRAQEEMKHSILSQVLDQQARARL 60

Query: 293 NTIKLSRPEKGAMVENMICRMAQMGQVQNRITEQELIQLLESVNQQMPKSTSTVKF 460
           NT+K+S+PEK  M ENM+ RMAQMGQV+ ++ + + + +LESVN QMP+S S+VK+
Sbjct: 61  NTLKVSKPEKAQMFENMVIRMAQMGQVRGKLDDAQFVSILESVNAQMPQSKSSVKY 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,833,902
Number of Sequences: 53049
Number of extensions: 354137
Number of successful extensions: 727
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2074444800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)