Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M14
(563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 30 1.3
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 30 1.3
>Z75550-2|CAA99928.2| 421|Caenorhabditis elegans Hypothetical
protein T22C1.3 protein.
Length = 421
Score = 38.3 bits (85), Expect = 0.004
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +2
Query: 239 YWHTLSNRVEIATPLNSWKRLIEGVYLYDHKINPYDGDSFHESPIMLITFHYFLKNIPYF 418
Y RVE+ + + S+++L + + + D +NP++ + H P+ L F + L P
Sbjct: 43 YSDLFEERVELTSVVYSFEKLKDSIAMVDDGLNPFEAKNMHFPPLTLHLFRFLLNTAPTM 102
Query: 419 I 421
I
Sbjct: 103 I 103
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
>Z93395-1|CAB07704.1| 1160|Caenorhabditis elegans Hypothetical
protein ZC101.2b protein.
Length = 1160
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical
protein ZC101.2f protein.
Length = 2389
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical
protein ZC101.2e protein.
Length = 3375
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical
protein ZC101.2c protein.
Length = 2295
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical
protein ZC101.2a protein.
Length = 2482
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -2
Query: 94 CNCKSKLMLPRADSCSPG-IHCSRAPP 17
C CKS++ P D C PG H S P
Sbjct: 400 CECKSQVTGPNCDQCKPGAFHLSEKSP 426
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,819,626
Number of Sequences: 27780
Number of extensions: 218814
Number of successful extensions: 499
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1166125180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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