Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M13
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical pr... 43 1e-04
AF043698-5|AAL65782.1| 104|Caenorhabditis elegans Saposin-like ... 36 0.028
AC024756-1|AAT39979.1| 104|Caenorhabditis elegans Saposin-like ... 36 0.028
AF000262-3|AAK21363.1| 118|Caenorhabditis elegans Saposin-like ... 33 0.11
U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like pr... 33 0.15
U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like pr... 33 0.20
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 31 0.46
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 31 0.46
U40417-8|AAP13768.1| 103|Caenorhabditis elegans Saposin-like pr... 31 0.81
U40417-7|AAA81416.1| 103|Caenorhabditis elegans Saposin-like pr... 31 0.81
Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical pr... 30 1.4
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 29 1.9
L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related p... 29 2.5
Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical pr... 29 3.3
U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g ... 28 4.3
AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like ... 28 4.3
Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical pr... 28 5.7
U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like pr... 27 7.5
U40417-5|AAM69085.1| 104|Caenorhabditis elegans Saposin-like pr... 27 7.5
U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with... 27 10.0
U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with... 27 10.0
U37430-3|AAX88825.1| 103|Caenorhabditis elegans Saposin-like pr... 27 10.0
AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans nonsense-medi... 27 10.0
AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical ... 27 10.0
>Z99279-3|CAB16495.1| 298|Caenorhabditis elegans Hypothetical
protein Y57G11A.3 protein.
Length = 298
Score = 43.2 bits (97), Expect = 1e-04
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Frame = +1
Query: 10 MKSENIHGVCKRMPKSVKSECDQFVEKYADLVISLLAQELEPSEVCTELKLCKPSIPNFD 189
M+ E I GV K S K ++F + +D+V+ A ++E S +++K F
Sbjct: 132 MQKEQIGGVGKETLASAK---ERFEKGESDIVVEKTAVDIERSADLSKMKAA------FQ 182
Query: 190 SVKAGEILDCAVCETVVMAVKKVLSNDAVDH-DIVHVVEKACGLLPAKYSAR-----CHT 351
VK E +C +C+ VV V+KVL+N + H + A L P +++ C
Sbjct: 183 EVKQEEKKNCCICDKVVYPVEKVLANKNLYHIQCFKCCKCAKKLTPTNFNSHEGKLLCKV 242
Query: 352 -MMEVYGDSVIHLIE 393
M+EV+ + H ++
Sbjct: 243 HMLEVFHPEIAHTMD 257
>AF043698-5|AAL65782.1| 104|Caenorhabditis elegans Saposin-like
protein family protein17 protein.
Length = 104
Score = 35.5 bits (78), Expect = 0.028
Identities = 14/50 (28%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Frame = +1
Query: 22 NIHGVC-KRMPK-SVKSECDQFVEKYADLVISLLAQELEPSEVCTELKLC 165
++ +C K +P S + C+++ E D++++L+ Q++ P +C EL+ C
Sbjct: 55 DVDAICLKEVPTHSAEHLCEEYGEHEVDVMVTLIKQDVPPKMICQELQKC 104
>AC024756-1|AAT39979.1| 104|Caenorhabditis elegans Saposin-like
protein family protein23 protein.
Length = 104
Score = 35.5 bits (78), Expect = 0.028
Identities = 11/37 (29%), Positives = 25/37 (67%)
Frame = +1
Query: 55 SVKSECDQFVEKYADLVISLLAQELEPSEVCTELKLC 165
+ + +C+Q+ ++ A ++I L+ +++ P +C ELK C
Sbjct: 68 AAEKDCEQYGDEEAAIIIDLIKKDVPPKTICQELKKC 104
>AF000262-3|AAK21363.1| 118|Caenorhabditis elegans Saposin-like
protein family protein15 protein.
Length = 118
Score = 33.5 bits (73), Expect = 0.11
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +1
Query: 37 CKR-MPKSVKSECDQFVEKYADLVISLLAQELEPSEVCTELKLCK 168
CK +P + C++ +EK + +I+ L E ++CT++ LC+
Sbjct: 62 CKEDVPSFMVDMCEKVIEKNLEYIINKLKDHEEADKICTDILLCR 106
>U40417-6|AAA81415.2| 90|Caenorhabditis elegans Saposin-like
protein family protein6 protein.
Length = 90
Score = 33.1 bits (72), Expect = 0.15
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 37 CKRMPKSVK---SECDQFVEKYADLVISLLAQELEPSEVCTELKLC 165
CK+ S++ EC+ +V+K D +I L P +VCT+L C
Sbjct: 44 CKKAFHSIQFAPRECEHYVDKKLDPIIKELESGTSPKDVCTKLGEC 89
>U40417-4|AAM69087.1| 100|Caenorhabditis elegans Saposin-like
protein family protein3 protein.
Length = 100
Score = 32.7 bits (71), Expect = 0.20
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = +1
Query: 67 ECDQFVEKYADLVISLLAQELEPSEVCTELKLC 165
EC +F++ D +I L PS+VCT+L +C
Sbjct: 68 ECKKFIDTKLDPIIHELENGTAPSDVCTKLGMC 100
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 31.5 bits (68), Expect = 0.46
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 16 SENIHGVCKRMPKSVKSECDQFVEKYADLVISLLAQELEPSEVCTELK 159
SEN+ V KR K + + + VEK S ++ E+ PS + ++LK
Sbjct: 476 SENVEKVDKRFQKGTQKKSEAVVEKKKGSSKSAVSGEMHPSWIASQLK 523
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 31.5 bits (68), Expect = 0.46
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 16 SENIHGVCKRMPKSVKSECDQFVEKYADLVISLLAQELEPSEVCTELK 159
SEN+ V KR K + + + VEK S ++ E+ PS + ++LK
Sbjct: 476 SENVEKVDKRFQKGTQKKSEAVVEKKKGSSKSAVSGEMHPSWIASQLK 523
>U40417-8|AAP13768.1| 103|Caenorhabditis elegans Saposin-like
protein family protein5 protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.81
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 67 ECDQFVEKYADLVISLLAQELEPSEVCTELKLC 165
ECD +V D +I L P +VCT+L C
Sbjct: 70 ECDHYVNSKVDPIIHELEGGTAPKDVCTKLNEC 102
>U40417-7|AAA81416.1| 103|Caenorhabditis elegans Saposin-like
protein family protein4 protein.
Length = 103
Score = 30.7 bits (66), Expect = 0.81
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 37 CKRMPKSVK---SECDQFVEKYADLVISLLAQELEPSEVCTELKLC 165
CK++ S+ EC+ +V D +I L P +VCT+L C
Sbjct: 57 CKKLFHSIPFAPQECEHYVNTKLDPIIKELESGTAPKDVCTKLHEC 102
>Z81096-7|CAB03163.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 97 DLVISLLAQELEPSEVCTELKLCKPSIPNFDSVKAGEILDCAVCETVVMAVKKVLSNDAV 276
+LV+SL+ EP+ + + L PS+ FD EI+ + + VK V N +
Sbjct: 926 ELVLSLICDSREPANCKSYIPLLFPSLTTFDQNTKMEIISVSTKLETISLVKPVNVNLSK 985
Query: 277 DH 282
H
Sbjct: 986 RH 987
>Z81028-6|CAB02695.2| 2769|Caenorhabditis elegans Hypothetical protein
B0365.7 protein.
Length = 2769
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/62 (29%), Positives = 29/62 (46%)
Frame = +1
Query: 97 DLVISLLAQELEPSEVCTELKLCKPSIPNFDSVKAGEILDCAVCETVVMAVKKVLSNDAV 276
+LV+SL+ EP+ + + L PS+ FD EI+ + + VK V N +
Sbjct: 926 ELVLSLICDSREPANCKSYIPLLFPSLTTFDQNTKMEIISVSTKLETISLVKPVNVNLSK 985
Query: 277 DH 282
H
Sbjct: 986 RH 987
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 29.5 bits (63), Expect = 1.9
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = +1
Query: 70 CDQFVE-KYADLVISLLAQELEPSEVCTELKLCKPSIPNFDSV 195
CD +E + DL+IS + QE++ VC L C P P+ D++
Sbjct: 192 CDLLIEIERIDLLISYV-QEVDHQRVCLYLLSCAPLTPDPDNI 233
>L14331-9|AAA28101.2| 1845|Caenorhabditis elegans Dicer related
protein 1 protein.
Length = 1845
Score = 29.1 bits (62), Expect = 2.5
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +1
Query: 52 KSVKSECDQFVEKYADLVISLLAQELEPSEV---CTELKLCKPSIPNFDSV 195
K ++S D +E +DLV SL +P EV C + ++ IPNFD+V
Sbjct: 198 KKLESAMDSVIETASDLV-SLSKYGAKPYEVVIICKDFEIGCLGIPNFDTV 247
>Z81458-4|CAB03824.1| 623|Caenorhabditis elegans Hypothetical
protein C03E10.5 protein.
Length = 623
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/45 (44%), Positives = 23/45 (51%), Gaps = 2/45 (4%)
Frame = -1
Query: 314 PQAFSTTCTMSWSTASLLSTFL--TAMTTVSHTAQSRISPALTES 186
P STT S STAS+ ST L TA T V+ T + S T S
Sbjct: 151 PSTISTTSGASSSTASVSSTILSSTATTMVTSTPTTEKSSTTTTS 195
>U46669-3|AAA85744.2| 737|Caenorhabditis elegans Regulator of g
protein signalingprotein 6 protein.
Length = 737
Score = 28.3 bits (60), Expect = 4.3
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = -1
Query: 302 STTCTMSWSTASLLSTFLTAMTTVSHTAQSRISPALTESKFG 177
STT T S +T S S+ TA V H +S +PA + G
Sbjct: 679 STTITTSGTTTSATSSVATAPPPVLHAMRSASTPATSSQLTG 720
>AC006833-9|AAF60943.1| 318|Caenorhabditis elegans Saposin-like
protein family protein7 protein.
Length = 318
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/48 (22%), Positives = 20/48 (41%)
Frame = +1
Query: 37 CKRMPKSVKSECDQFVEKYADLVISLLAQELEPSEVCTELKLCKPSIP 180
C+ +P K +C FVE + + ++ +VC + C P
Sbjct: 77 CRVLPSVFKEQCFAFVETSLPEIYYSINYDISSKDVCVRMNFCDERNP 124
>Z22176-7|CAA80137.1| 910|Caenorhabditis elegans Hypothetical
protein ZK1098.8 protein.
Length = 910
Score = 27.9 bits (59), Expect = 5.7
Identities = 23/81 (28%), Positives = 36/81 (44%)
Frame = +1
Query: 88 KYADLVISLLAQELEPSEVCTELKLCKPSIPNFDSVKAGEILDCAVCETVVMAVKKVLSN 267
K ADL LL EL+ +E C+ + C+P + V A LD V + ++
Sbjct: 551 KLADLTHYLLGLELDKTEQCSNWQ-CRP-LRKKQIVYAA--LDAVVVVETFKKILSIVEE 606
Query: 268 DAVDHDIVHVVEKACGLLPAK 330
D DI +V ++ + P K
Sbjct: 607 KNKDADIEKIVRESNVMAPKK 627
>U40797-2|AAB37549.2| 429|Caenorhabditis elegans Saposin-like
protein family protein10, isoform b protein.
Length = 429
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/45 (26%), Positives = 20/45 (44%)
Frame = +1
Query: 40 KRMPKSVKSECDQFVEKYADLVISLLAQELEPSEVCTELKLCKPS 174
K + ++ C F++ Y VI + ++ P VC K C S
Sbjct: 294 KIVTANMTDSCIDFLDLYLPTVIQMTVEQATPQGVCLANKCCPAS 338
>U40417-5|AAM69085.1| 104|Caenorhabditis elegans Saposin-like
protein family protein2 protein.
Length = 104
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +1
Query: 37 CKRMPKSVK---SECDQFVEKYADLVISLLAQELEPSEVCTELKLC 165
CK++ ++ EC+ +V + D +I L P +VC +L C
Sbjct: 57 CKKLFHAIPFAPQECEHYVNEKLDPIIKELESGTAPKDVCKKLGEC 102
>U97189-4|AAC48167.3| 2322|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform a
protein.
Length = 2322
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/93 (19%), Positives = 40/93 (43%)
Frame = -1
Query: 449 DSVVLQSPIFWQTPLMPNSSIRWITLSPYTSIIV*HLAEYLAGSKPQAFSTTCTMSWSTA 270
++V+ QS + W + N ++ ++ + S + + +A +A T W +
Sbjct: 597 NTVIHQSVLTWNNECV-NQALTILSTATKWSELTSDIHRDIADKTKKAKWKEATTIWESG 655
Query: 269 SLLSTFLTAMTTVSHTAQSRISPALTESKFGID 171
+ +M+TV +Q R +T + FG +
Sbjct: 656 DCNTYIRQSMSTVYQMSQERQQKTITSTSFGAE 688
>U97189-3|AAT68901.1| 2019|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 1, isoform b
protein.
Length = 2019
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/93 (19%), Positives = 40/93 (43%)
Frame = -1
Query: 449 DSVVLQSPIFWQTPLMPNSSIRWITLSPYTSIIV*HLAEYLAGSKPQAFSTTCTMSWSTA 270
++V+ QS + W + N ++ ++ + S + + +A +A T W +
Sbjct: 597 NTVIHQSVLTWNNECV-NQALTILSTATKWSELTSDIHRDIADKTKKAKWKEATTIWESG 655
Query: 269 SLLSTFLTAMTTVSHTAQSRISPALTESKFGID 171
+ +M+TV +Q R +T + FG +
Sbjct: 656 DCNTYIRQSMSTVYQMSQERQQKTITSTSFGAE 688
>U37430-3|AAX88825.1| 103|Caenorhabditis elegans Saposin-like
protein family protein14 protein.
Length = 103
Score = 27.1 bits (57), Expect = 10.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 61 KSECDQFVEKYADLVISLLAQELEPSEVCTELKLC 165
+ EC+++ D +I+ L P +VC +LK C
Sbjct: 69 EKECEKYGNSKLDPIINELEGGTAPEDVCKKLKEC 103
>AF149821-1|AAD48773.1| 2322|Caenorhabditis elegans
nonsense-mediated mRNA decay proteinSMG-1 protein.
Length = 2322
Score = 27.1 bits (57), Expect = 10.0
Identities = 18/93 (19%), Positives = 40/93 (43%)
Frame = -1
Query: 449 DSVVLQSPIFWQTPLMPNSSIRWITLSPYTSIIV*HLAEYLAGSKPQAFSTTCTMSWSTA 270
++V+ QS + W + N ++ ++ + S + + +A +A T W +
Sbjct: 597 NTVIHQSVLTWNNECV-NQALTILSTATKWSELTSDIHRDIADKTKKAKWKEATTIWESG 655
Query: 269 SLLSTFLTAMTTVSHTAQSRISPALTESKFGID 171
+ +M+TV +Q R +T + FG +
Sbjct: 656 DCNTYIRQSMSTVYQMSQERQQKTITSTSFGAE 688
>AC024136-4|AAF35963.3| 543|Caenorhabditis elegans Hypothetical
protein F54A3.3 protein.
Length = 543
Score = 27.1 bits (57), Expect = 10.0
Identities = 8/34 (23%), Positives = 22/34 (64%)
Frame = +1
Query: 10 MKSENIHGVCKRMPKSVKSECDQFVEKYADLVIS 111
M+ E+I + ++ ++++ +CD+ ++ DLV +
Sbjct: 262 MREEDISAILEQEEQAIRKQCDEIIKLKPDLVFT 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,890,409
Number of Sequences: 27780
Number of extensions: 225229
Number of successful extensions: 728
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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