Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0011_M13
         (590 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487333-1|AAL93262.1|   80|Apis mellifera integrin betaPS protein.    23   1.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   3.9  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    22   5.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    22   5.2  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   9.0  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   9.0  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   9.0  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   9.0  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   9.0  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   9.0  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   9.0  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   9.0  

>AF487333-1|AAL93262.1|   80|Apis mellifera integrin betaPS protein.
          Length = 80

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 46  MPKSVKSECDQFVEKYADLVISLLAQE 126
           MPKS+K  CD     Y    I  L+Q+
Sbjct: 12  MPKSLKEPCDGCAAPYGYKNIMTLSQD 38


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +1

Query: 94  ADLVISLLAQELEPSEVCTELKLCKPSIP 180
           A+L +  + Q     EV   +  C+PSIP
Sbjct: 90  AELALRNIVQFRNTPEVHQAINTCQPSIP 118


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 139 EVCTELKLCKPSIPNFD 189
           +VC++LK   PS+ N+D
Sbjct: 350 DVCSKLKGLCPSMANYD 366


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +1

Query: 139 EVCTELKLCKPSIPNFD 189
           +VC++LK   PS+ N+D
Sbjct: 440 DVCSKLKGLCPSMANYD 456


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 399 RHQWRLPEDRALQHNRVR 452
           R +W + ++R  +H R++
Sbjct: 39  RREWMIQQEREREHERLK 56


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 399 RHQWRLPEDRALQHNRVR 452
           R +W + ++R  +H R++
Sbjct: 39  RREWMIQQEREREHERLK 56


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 399 RHQWRLPEDRALQHNRVR 452
           R +W + ++R  +H R++
Sbjct: 39  RREWMIQQEREREHERLK 56


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 399 RHQWRLPEDRALQHNRVR 452
           R +W + ++R  +H R++
Sbjct: 39  RREWMIQQEREREHERLK 56


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 399 RHQWRLPEDRALQHNRVR 452
           R +W + ++R  +H R++
Sbjct: 39  RREWMIQQEREREHERLK 56


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 399 RHQWRLPEDRALQHNRVR 452
           R +W + ++R  +H R++
Sbjct: 39  RREWMIQQEREREHERLK 56


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 399 RHQWRLPEDRALQHNRVR 452
           R +W + ++R  +H R++
Sbjct: 39  RREWMIQQEREREHERLK 56


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/18 (27%), Positives = 12/18 (66%)
 Frame = +3

Query: 399 RHQWRLPEDRALQHNRVR 452
           R +W + ++R  +H R++
Sbjct: 39  RREWMIQQEREREHERLK 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,669
Number of Sequences: 438
Number of extensions: 2899
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)