Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M09
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 24 1.1
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 2.5
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 22 3.3
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 22 3.3
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 22 3.3
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 22 3.3
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 22 3.3
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 22 3.3
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 22 3.3
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 3.3
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 3.3
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 3.3
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 3.3
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 22 3.3
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 3.3
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 3.3
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 3.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 4.4
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 22 4.4
AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin pr... 21 7.7
AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein. 21 7.7
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 23.8 bits (49), Expect = 1.1
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 215 SPSTNPKVASS*TCFTSGSVEKSSSA 292
SPS NP++AS+ + TS S +A
Sbjct: 510 SPSPNPRIASAPSSSTSSSPPAKGAA 535
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
Frame = +2
Query: 140 ASPRGVQTRHSMPWK---PTRYC*EVWHSP 220
A P G R +P PTRY E W++P
Sbjct: 439 ADPNGDYIRRYLPVLKNFPTRYIHEPWNAP 468
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 69 DRRERGRSREHRIIPSHYIEQI 90
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 302 DRRERGRSREHRIIPSHYIEQI 323
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 3.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 318 DRRERGRSREHRIIPSHYIEQI 339
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 21.8 bits (44), Expect = 4.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 81 DRRPEGRAGSRRIFPPQFKLQV 146
DRR GR+ RI P + Q+
Sbjct: 317 DRRGRGRSREHRIIPSHYIEQI 338
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.8 bits (44), Expect = 4.4
Identities = 6/14 (42%), Positives = 9/14 (64%)
Frame = -1
Query: 518 GLALWFYCCRKLIR 477
GL +W +C K +R
Sbjct: 67 GLVIWIFCAAKSLR 80
>AY496432-1|AAS75803.1| 95|Apis mellifera defensin/royalisin
precursor protein.
Length = 95
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 44 HCLKYVCTCR 15
HC K VC CR
Sbjct: 73 HCEKGVCICR 82
>AJ308527-1|CAC33429.1| 57|Apis mellifera defensin protein.
Length = 57
Score = 21.0 bits (42), Expect = 7.7
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = -1
Query: 44 HCLKYVCTCR 15
HC K VC CR
Sbjct: 48 HCEKGVCICR 57
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,279
Number of Sequences: 438
Number of extensions: 1909
Number of successful extensions: 25
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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