Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M06
(499 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 345 1e-95
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 338 1e-93
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 338 1e-93
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 334 2e-92
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 332 6e-92
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 332 8e-92
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 185 2e-47
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 185 2e-47
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 130 5e-31
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 130 5e-31
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 130 5e-31
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 130 5e-31
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 129 1e-30
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 129 1e-30
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 129 1e-30
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 129 1e-30
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 127 4e-30
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 127 4e-30
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 127 4e-30
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 126 9e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 124 3e-29
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 120 8e-28
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 120 8e-28
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 113 9e-26
AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical ... 61 4e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 29 1.9
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 29 1.9
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 29 2.5
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 29 2.5
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 29 2.5
Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical pr... 28 3.3
AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical ... 28 3.3
AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical ... 28 4.3
AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical ... 28 4.3
Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical p... 27 5.7
Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical p... 27 5.7
Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical p... 27 5.7
Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical pr... 27 5.7
DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48 expres... 27 5.7
U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifyi... 27 7.6
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 27 7.6
Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical pr... 27 10.0
Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical pr... 27 10.0
U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical pr... 27 10.0
U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical pr... 27 10.0
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 27 10.0
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 27 10.0
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 27 10.0
AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative acti... 27 10.0
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 345 bits (847), Expect = 1e-95
Identities = 158/164 (96%), Positives = 163/164 (99%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
RLHFFMPGFAPLTSRGSQQYR+LTVPELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRM
Sbjct: 262 RLHFFMPGFAPLTSRGSQQYRSLTVPELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRM 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 365
SMKEVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRG+KMAATF+GNSTAIQELFKRI
Sbjct: 322 SMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGVKMAATFVGNSTAIQELFKRI 381
Query: 366 SEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 497
SEQFTAMFRR AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 338 bits (831), Expect = 1e-93
Identities = 156/164 (95%), Positives = 160/164 (97%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
RLHFFMPGFAPLTSR +QQYRA+TVPELTQQ FDAKNMMAACDPRHGRYLT AAIFRGRM
Sbjct: 262 RLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRM 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 365
SMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRI
Sbjct: 322 SMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRI 381
Query: 366 SEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 497
SEQFTAMFRR AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 338 bits (831), Expect = 1e-93
Identities = 156/164 (95%), Positives = 160/164 (97%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
RLHFFMPGFAPLTSR +QQYRA+TVPELTQQ FDAKNMMAACDPRHGRYLT AAIFRGRM
Sbjct: 262 RLHFFMPGFAPLTSRSNQQYRAITVPELTQQCFDAKNMMAACDPRHGRYLTAAAIFRGRM 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 365
SMKEVDEQMLNIQNKNSSYFV+WIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRI
Sbjct: 322 SMKEVDEQMLNIQNKNSSYFVDWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRI 381
Query: 366 SEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 497
SEQFTAMFRR AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 334 bits (822), Expect = 2e-92
Identities = 152/164 (92%), Positives = 161/164 (98%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
RLHFFMPGFAPL+++G+Q YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRM
Sbjct: 262 RLHFFMPGFAPLSAKGTQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRM 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 365
SM+EVDEQMLN+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRI
Sbjct: 322 SMREVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRI 381
Query: 366 SEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 497
SEQFTAMFRR AFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 332 bits (817), Expect = 6e-92
Identities = 151/164 (92%), Positives = 161/164 (98%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
RLHFFMPGFAPL+++G+Q YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRM
Sbjct: 262 RLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRM 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 365
SM+EVDEQML++QNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATF+GNSTAIQELFKRI
Sbjct: 322 SMREVDEQMLSVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFVGNSTAIQELFKRI 381
Query: 366 SEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 497
SEQFTAMFRR AFLHWYTGEGMDEMEFTEAESNMNDL+SEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQY 425
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 332 bits (816), Expect = 8e-92
Identities = 151/164 (92%), Positives = 161/164 (98%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
RLHFFMPGFAPL+++G+Q YRALTV ELTQQMFDAKNMMAACDPRHGRYLTVAA+FRGRM
Sbjct: 262 RLHFFMPGFAPLSAKGAQAYRALTVAELTQQMFDAKNMMAACDPRHGRYLTVAAMFRGRM 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 365
SM+EVD+QM+N+QNKNSSYFVEWIPNNVKTAVCDIPPRGLKM+ATFIGNSTAIQELFKRI
Sbjct: 322 SMREVDDQMMNVQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNSTAIQELFKRI 381
Query: 366 SEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 497
SEQFTAMFRR AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 425
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 185 bits (450), Expect = 2e-47
Identities = 86/164 (52%), Positives = 121/164 (73%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
RLHFFM FAP+ +G +A ++ +LTQQ+ DAKN+M C+ G++L+ A I+RG+
Sbjct: 261 RLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQ 319
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 365
+ K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATFI NSTAIQE KRI
Sbjct: 320 TEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRI 379
Query: 366 SEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 497
S+QF +FRR AFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 380 SKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 185 bits (450), Expect = 2e-47
Identities = 86/164 (52%), Positives = 121/164 (73%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
RLHFFM FAP+ +G +A ++ +LTQQ+ DAKN+M C+ G++L+ A I+RG+
Sbjct: 261 RLHFFMTSFAPVYGKGIIDCQAFSISDLTQQVLDAKNIMT-CNHNQGKFLSSAIIYRGQQ 319
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQELFKRI 365
+ K+ EQ+++++N++ S +E +P + T VCDIP RGLK +ATFI NSTAIQE KRI
Sbjct: 320 TEKKDAEQIISVENEDPSEMIESLPKSTNTDVCDIPSRGLKTSATFIANSTAIQEPLKRI 379
Query: 366 SEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQY 497
S+QF +FRR AFLHWYT M+E EFT+AE+ +NDL+SE+QQY
Sbjct: 380 SKQFAGLFRRKAFLHWYT---MEESEFTDAENKVNDLISEFQQY 420
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 130 bits (314), Expect = 5e-31
Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG +
Sbjct: 264 RIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDV 323
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K S FV+W P K + PP + A + N+TA
Sbjct: 324 VPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 383
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 130 bits (314), Expect = 5e-31
Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG +
Sbjct: 263 RIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDV 322
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K S FV+W P K + PP + A + N+TA
Sbjct: 323 VPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 382
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 383 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 433
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 130 bits (314), Expect = 5e-31
Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG +
Sbjct: 264 RIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDV 323
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K S FV+W P K + PP + A + N+TA
Sbjct: 324 VPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 383
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 130 bits (314), Expect = 5e-31
Identities = 61/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + F+P+ S + L+V E+T F+ N M CDPRHG+Y+ V +FRG +
Sbjct: 264 RIHFPLATFSPVISAEKAYHEQLSVAEITNMCFEPHNQMVKCDPRHGKYMAVCLLFRGDV 323
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K S FV+W P K + PP + A + N+TA
Sbjct: 324 VPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 383
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 129 bits (312), Expect = 1e-30
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG +
Sbjct: 262 RIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDV 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K + FV+W P K + PP + A + N+TA
Sbjct: 322 VPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 381
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 382 IAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 129 bits (312), Expect = 1e-30
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG +
Sbjct: 262 RIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDV 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K + FV+W P K + PP + A + N+TA
Sbjct: 322 VPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 381
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 382 IAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 129 bits (312), Expect = 1e-30
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG +
Sbjct: 262 RIHFPLAAYTPLISADKAYHEALSVNDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDV 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K + FV+W P K + PP + A + N+TA
Sbjct: 322 VPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 381
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 382 IAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 129 bits (312), Expect = 1e-30
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + + PL S + AL+V ++T F+ N M CDPRHG+Y+ V ++RG +
Sbjct: 262 RIHFPLAAYTPLISAEKAYHEALSVSDITNSCFEPANQMVKCDPRHGKYMAVCLLYRGDV 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K + FV+W P K + PP + A + N+TA
Sbjct: 322 VPKDVNTAIAAIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 381
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 382 IAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 127 bits (307), Expect = 4e-30
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + + PL S + AL+V ++T F+ N M CDPR+G+Y+ V ++RG +
Sbjct: 262 RIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDV 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K S FV+W P K + PP + A + N+TA
Sbjct: 322 VPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 381
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 382 IAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 127 bits (307), Expect = 4e-30
Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + +AP+ S + +TV E+TQQ F+ M CDPR G+Y+ ++RG +
Sbjct: 269 RIHFPLTTYAPIISAEKAYHEQMTVAEITQQCFEPGAQMVKCDPRRGKYMACCLLYRGDV 328
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + +++ K S FV+W P K + PP L+ A + N+TA
Sbjct: 329 VPKDVNAAIASVKTKRSIQFVDWCPTGFKVGINYQPPTVVPGADLSKLQRAVCMLSNTTA 388
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 439
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 127 bits (307), Expect = 4e-30
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + + PL S + AL+V ++T F+ N M CDPR+G+Y+ V ++RG +
Sbjct: 262 RIHFPLASYTPLISAEKAYHEALSVNDITNSCFEPANQMVKCDPRNGKYMAVCLLYRGDV 321
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V+ + I+ K S FV+W P K + PP + A + N+TA
Sbjct: 322 VPKDVNTAITAIKTKRSVQFVDWCPTGFKVGINYQPPTVVPGGDLAKVPRAVCMLSNTTA 381
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 382 IAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 432
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 126 bits (304), Expect = 9e-30
Identities = 59/171 (34%), Positives = 96/171 (56%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + +AP+ S + L+V E+T F+ + M CDPR+G+Y+ ++RG +
Sbjct: 264 RIHFPLVTYAPIISAEKAYHEQLSVSEITNVCFEPGSQMVKCDPRNGKYMACCLLYRGDV 323
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
KE++ + I+ K + FV+W P K + PP L+ A + N+TA
Sbjct: 324 VPKEINSAISTIKTKRAIQFVDWCPTGFKVGINYQPPTVVPGGDMAKLQRAVCMLSNTTA 383
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
IQE + R+ +F M+ + AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 384 IQEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 434
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 124 bits (300), Expect = 3e-29
Identities = 59/171 (34%), Positives = 98/171 (57%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + + PL S ++ L+V E+T+ F+A N M CDP+HG+Y+ V ++RG +
Sbjct: 261 RIHFPLVAYNPLISSAHHEF--LSVDEITKSCFEASNQMVKCDPKHGKYMAVCLLYRGDV 318
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMAATFIGNSTA 341
K+V + +I+ + S FV+W P K + PP + A + N+TA
Sbjct: 319 VPKDVSAAIKSIKTQRSVQFVDWCPTGFKVGLNYQPPTVIPGGDMAKVPRAVCMLSNTTA 378
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E ++R+ +F M+ + AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 379 IAEAWQRLDYKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 429
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 120 bits (288), Expect = 8e-28
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + +APL S + TV ++T F+ M CDPR G+Y+ V ++RG +
Sbjct: 270 RIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDV 329
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMAATFIGNSTA 341
K+++ + ++ K + FVEW P K + PP + + I N+TA
Sbjct: 330 VPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTA 389
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 390 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 440
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 120 bits (288), Expect = 8e-28
Identities = 57/171 (33%), Positives = 92/171 (53%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + +APL S + TV ++T F+ M CDPR G+Y+ V ++RG +
Sbjct: 242 RIHFPLVTYAPLVSAERASHEQNTVSDMTHACFEPGYQMVKCDPRRGKYMAVCLLYRGDV 301
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGL--------KMAATFIGNSTA 341
K+++ + ++ K + FVEW P K + PP + + I N+TA
Sbjct: 302 VPKDINSAIAAVKTKRTVQFVEWCPTGFKVGINYQPPTVVPGGDLGKQTRSVCMISNTTA 361
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HWY GEGM+E EF+EA +M L +Y++
Sbjct: 362 IAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEE 412
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 113 bits (271), Expect = 9e-26
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 8/171 (4%)
Frame = +3
Query: 6 RLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPRHGRYLTVAAIFRGRM 185
R+HF + +AP+ S + L+V ++T F+ N M CDP G+Y+ V ++RG +
Sbjct: 267 RIHFPLATYAPVISADRAHHEPLSVQDITHMCFEKANQMVKCDPSAGKYMAVCLLYRGDV 326
Query: 186 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAV---CDIPPRG-----LKMAATFIGNSTA 341
K+V+ + +++ K FV+W P K + I G + A + N+TA
Sbjct: 327 VPKDVNAAISSVKAKRGINFVDWCPTGFKVGINYQAPITVEGGDLAKVHRAVCMLSNTTA 386
Query: 342 IQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
I E + R+ +F M+ + AF+HW+ GEGM+E EF EA ++ L +Y +
Sbjct: 387 IAEAWARLDHKFDLMYSKRAFVHWFVGEGMEEGEFMEARDDLAALEKDYAE 437
>AL023832-1|CAA19475.1| 85|Caenorhabditis elegans Hypothetical
protein Y19D2B.1 protein.
Length = 85
Score = 61.3 bits (142), Expect = 4e-10
Identities = 24/57 (42%), Positives = 39/57 (68%)
Frame = +3
Query: 324 IGNSTAIQELFKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 494
+ ++TAI E + R+ +F M+ + AF+HWY GEGM+E EFTEA ++ L +Y++
Sbjct: 13 LSDTTAIAEAWSRLDYKFDLMYAKRAFVHWYVGEGMEEGEFTEAREDLAALEKDYEE 69
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 29.1 bits (62), Expect = 1.9
Identities = 28/169 (16%), Positives = 70/169 (41%), Gaps = 8/169 (4%)
Frame = +3
Query: 9 LHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPR---HGRYLTVAAIFRG 179
+HF +P+ R +V ++T+ + +MM + R + L+ +G
Sbjct: 266 MHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQG 325
Query: 180 RMSMKEV--DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQEL 353
++ + EQ ++ + +++ + + K++ + NST++ L
Sbjct: 326 QIEAHTIMTAEQNVDFAIRRPPFYMLKPLRMMHAPLSPYVRPQYKVSGLLLNNSTSVAPL 385
Query: 354 FKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMN---DLVSEYQ 491
F+ + ++ + + AF+ + E +D + M+ DL+ EY+
Sbjct: 386 FESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDLLDEYK 432
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 29.1 bits (62), Expect = 1.9
Identities = 28/169 (16%), Positives = 70/169 (41%), Gaps = 8/169 (4%)
Frame = +3
Query: 9 LHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMMAACDPR---HGRYLTVAAIFRG 179
+HF +P+ R +V ++T+ + +MM + R + L+ +G
Sbjct: 266 MHFIQSAISPVVDPNENFTRKTSVADVTRFLLKPTSMMVSTASRVRPNDCMLSAYMFLQG 325
Query: 180 RMSMKEV--DEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMAATFIGNSTAIQEL 353
++ + EQ ++ + +++ + + K++ + NST++ L
Sbjct: 326 QIEAHTIMTAEQNVDFAIRRPPFYMLKPLRMMHAPLSPYVRPQYKVSGLLLNNSTSVAPL 385
Query: 354 FKRISEQFTAMFRRNAFLHWYTGEGMDEMEFTEAESNMN---DLVSEYQ 491
F+ + ++ + + AF+ + E +D + M+ DL+ EY+
Sbjct: 386 FESLLSKYDKLRSKRAFIDKF--EKIDNFSLDMMDDAMHIVQDLLDEYK 432
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +3
Query: 282 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRNAFLHWYT--GEGMDE 437
C I PR + T I N T +QEL K I E+ R++ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 438 MEFTEAESNMNDLVSEY 488
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +3
Query: 282 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRNAFLHWYT--GEGMDE 437
C I PR + T I N T +QEL K I E+ R++ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 438 MEFTEAESNMNDLVSEY 488
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 28.7 bits (61), Expect = 2.5
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 8/77 (10%)
Frame = +3
Query: 282 CDIPPRGLKMAATFIGNST------AIQELFKRISEQFTAMFRRNAFLHWYT--GEGMDE 437
C I PR + T I N T +QEL K I E+ R++ + W T + DE
Sbjct: 683 CKINPRQVPKLITLIANMTEMNENKGVQELKKVIEEETEKSRRQSIYYPWSTLQRDDDDE 742
Query: 438 MEFTEAESNMNDLVSEY 488
E+ + E +++D+ ++
Sbjct: 743 EEWND-EEDLSDVGEDF 758
>Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -3
Query: 200 DFLHRHTTTEDGCDGEVTAVTRVTRRHHVLSVEHLLCELGDGERAVLLTAA 48
D + T E+ DGE T R TRRH L + E GDG+ A T A
Sbjct: 211 DEKEKSDTIENSGDGE-TRGKRRTRRHGKLQPDAPSGEKGDGDAAAATTDA 260
>AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 28.3 bits (60), Expect = 3.3
Identities = 20/51 (39%), Positives = 24/51 (47%)
Frame = -3
Query: 200 DFLHRHTTTEDGCDGEVTAVTRVTRRHHVLSVEHLLCELGDGERAVLLTAA 48
D + T E+ DGE T R TRRH L + E GDG+ A T A
Sbjct: 211 DEKEKSDTIENSGDGE-TRGKRRTRRHGKLQPDAPSGEKGDGDAAAATTDA 260
>AF003389-4|AAN63407.1| 598|Caenorhabditis elegans Hypothetical
protein F23H11.4b protein.
Length = 598
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -3
Query: 413 PVQESIASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV-AHGGLHVVRDPFHE 243
P ++I S S ++FRD + +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
>AF003389-3|AAC71136.1| 1003|Caenorhabditis elegans Hypothetical
protein F23H11.4a protein.
Length = 1003
Score = 27.9 bits (59), Expect = 4.3
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -3
Query: 413 PVQESIASEHSGELFRDALEQLLDGGRVTDEGRRHLQSAGRDV-AHGGLHVVRDPFHE 243
P ++I S S ++FRD + +DG +T G L S+ ++ H L ++ FH+
Sbjct: 308 PSADNIISSESDDVFRDEGKMKIDGSSITFVGFVSLTSSKKEKRLHCRLRNMQLSFHD 365
>Z83221-3|CAB05705.1| 498|Caenorhabditis elegans Hypothetical
protein C49A1.5 protein.
Length = 498
Score = 27.5 bits (58), Expect = 5.7
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -1
Query: 394 RLNIAVNCSEMRLNSSWMAVELPMKVAAIFSPR 296
R N N ++++ S+ ++VE+P K+A +P+
Sbjct: 117 RTNTVDNLEKIKIESNGVSVEIPFKIARYTAPK 149
>Z68316-11|CAO82045.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 374 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 195
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 194 LHRHT 180
L T
Sbjct: 813 LESMT 817
>Z68316-10|CAO82044.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 374 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 195
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 194 LHRHT 180
L T
Sbjct: 811 LESMT 815
>Z68316-9|CAA92684.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 374 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 195
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 194 LHRHT 180
L T
Sbjct: 813 LESMT 817
>Z68297-10|CAO82029.1| 1242|Caenorhabditis elegans Hypothetical
protein F11A10.1c protein.
Length = 1242
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 374 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 195
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 194 LHRHT 180
L T
Sbjct: 813 LESMT 817
>Z68297-9|CAO82028.1| 1289|Caenorhabditis elegans Hypothetical
protein F11A10.1b protein.
Length = 1289
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 374 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 195
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 751 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 810
Query: 194 LHRHT 180
L T
Sbjct: 811 LESMT 815
>Z68297-8|CAA92596.2| 1291|Caenorhabditis elegans Hypothetical
protein F11A10.1a protein.
Length = 1291
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 374 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 195
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 194 LHRHT 180
L T
Sbjct: 813 LESMT 817
>DQ140399-1|AAZ73761.1| 1291|Caenorhabditis elegans lin-48
expression abnormal protein protein.
Length = 1291
Score = 27.5 bits (58), Expect = 5.7
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -3
Query: 374 LFRDALEQLLDGGRVTDEGRRHLQSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDF 195
+F ++ LL GR + +QSA R A G ++ E +V+ ++V+H+LI
Sbjct: 753 VFSLSVSSLLTDGRPEEAFSNAIQSAMRASATGPCIMLLPSIDEWIKVIPVSVQHMLITC 812
Query: 194 LHRHT 180
L T
Sbjct: 813 LESMT 817
>U40947-5|AAC48070.1| 505|Caenorhabditis elegans Inward rectifying
k (potassium)channel family protein 1 protein.
Length = 505
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/22 (50%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Frame = +2
Query: 350 AVQAH--LGTVHRYVQTQCFLA 409
AV+ H +G HRY+ T+C+LA
Sbjct: 167 AVETHHTIGYGHRYITTECYLA 188
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 156 TVAAIFRGRMSMKEVDEQMLNIQNKNSSYFVEW 254
T + R RM +K+VDE++L K + EW
Sbjct: 119 TFKQMVRDRMKVKDVDEKLLQQYMKKENVEFEW 151
>Z70757-7|CAA94803.2| 387|Caenorhabditis elegans Hypothetical
protein ZK287.7 protein.
Length = 387
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/40 (27%), Positives = 21/40 (52%)
Frame = -3
Query: 305 QSAGRDVAHGGLHVVRDPFHEVRRVLVLNVKHLLIDFLHR 186
+ G AHG + + P H + + +L ++H DF++R
Sbjct: 327 EDVGGHEAHGLVAAAKPPAHFIAMLDLLGLRHAYKDFMNR 366
>Z49887-3|CAC70079.1| 639|Caenorhabditis elegans Hypothetical
protein F09B9.2b protein.
Length = 639
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 26 RFRSPHVPRQSAVPRAHRPRAHTAD 100
R +SPH+ + + AH P AH D
Sbjct: 337 RPKSPHMDNEEPIELAHYPAAHVPD 361
>Z49887-2|CAA90057.1| 625|Caenorhabditis elegans Hypothetical
protein F09B9.2a protein.
Length = 625
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 26 RFRSPHVPRQSAVPRAHRPRAHTAD 100
R +SPH+ + + AH P AH D
Sbjct: 323 RPKSPHMDNEEPIELAHYPAAHVPD 347
>U70852-3|AAK29822.1| 836|Caenorhabditis elegans Hypothetical
protein F45E4.3b protein.
Length = 836
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 35 SPHVPRQSAVPRAHRPRAHTADVR 106
S HVP ++PR PR +DVR
Sbjct: 481 SSHVPHYGSLPRIDYPRGTRSDVR 504
>U70852-2|AAK29821.1| 1231|Caenorhabditis elegans Hypothetical
protein F45E4.3a protein.
Length = 1231
Score = 26.6 bits (56), Expect = 10.0
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 35 SPHVPRQSAVPRAHRPRAHTADVR 106
S HVP ++PR PR +DVR
Sbjct: 481 SSHVPHYGSLPRIDYPRGTRSDVR 504
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 20 HARFRSPHVPRQSAVPRAHRPRAHT 94
H + +P SA P AHRPRA T
Sbjct: 1077 HQKSLTPSETSASATPPAHRPRAAT 1101
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 20 HARFRSPHVPRQSAVPRAHRPRAHT 94
H + +P SA P AHRPRA T
Sbjct: 991 HQKSLTPSETSASATPPAHRPRAAT 1015
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 26.6 bits (56), Expect = 10.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = +2
Query: 20 HARFRSPHVPRQSAVPRAHRPRAHT 94
H + +P SA P AHRPRA T
Sbjct: 991 HQKSLTPSETSASATPPAHRPRAAT 1015
>AF068867-1|AAC35506.1| 639|Caenorhabditis elegans putative
actin-binding proteinUNC-115 protein.
Length = 639
Score = 26.6 bits (56), Expect = 10.0
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +2
Query: 26 RFRSPHVPRQSAVPRAHRPRAHTAD 100
R +SPH+ + + AH P AH D
Sbjct: 337 RPKSPHMDNEEPIELAHYPAAHVPD 361
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,833,587
Number of Sequences: 27780
Number of extensions: 193495
Number of successful extensions: 707
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 945973702
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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