Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M04
(362 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal pro... 155 7e-39
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 31 0.19
Z35604-5|CAA84680.2| 269|Caenorhabditis elegans Hypothetical pr... 29 1.3
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 28 1.7
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 28 1.7
AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical ... 28 2.3
AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical ... 27 4.0
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 27 4.0
Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z72512-1|CAA96663.2| 326|Caenorhabditis elegans Hypothetical pr... 27 5.3
Z81537-11|CAB04377.2| 329|Caenorhabditis elegans Hypothetical p... 26 7.0
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 26 7.0
Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical pr... 26 7.0
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 26 7.0
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 26 7.0
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 26 7.0
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 26 7.0
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d... 26 9.3
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase... 26 9.3
>AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 19 protein.
Length = 198
Score = 155 bits (377), Expect = 7e-39
Identities = 69/116 (59%), Positives = 89/116 (76%)
Frame = +3
Query: 15 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 194
MS+L+LQKRLA++V++CGK +VWLDPNE++EI+ NSRQ+IR+++ DGL+I+KPV VHSR
Sbjct: 1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSR 60
Query: 195 ARVRKNTEARRKGRHCGFGKRRGTANARMPQKELWXXXXXXXXXXXXXXXTAKKID 362
R R+ EARRKGRH G+GKRRGTANARMP+K LW AKK+D
Sbjct: 61 FRAREYEEARRKGRHTGYGKRRGTANARMPEKTLWIRRMRVLRNLLRRYRDAKKLD 116
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
ZC373.4 protein.
Length = 1211
Score = 31.5 bits (68), Expect = 0.19
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 111 ANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCG 245
++T+S +N+R ++ D +K V H R ++E R+K R G
Sbjct: 1055 SDTSSSKNVRILLTDEQSVKSSVRSHPSVSTRDSSEERKKVRFAG 1099
>Z35604-5|CAA84680.2| 269|Caenorhabditis elegans Hypothetical
protein ZK1058.5 protein.
Length = 269
Score = 28.7 bits (61), Expect = 1.3
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +3
Query: 123 SRQNIRKMIK-DGLVIKKPVAVHSRARVRKNTEARRKGR 236
S +N+RKMIK G V+ + ++ A +R EAR R
Sbjct: 170 SAENVRKMIKIGGSVVVRDYGINDHAMIRFGREARISDR 208
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 224 ARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISD 108
A+ V ++ + + W L++ + +HLT +L I ISD
Sbjct: 1282 AKCQVLVDSQKNIPNEWHLENSSKDEHLTSILKMIGISD 1320
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -1
Query: 224 ARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISD 108
A+ V ++ + + W L++ + +HLT +L I ISD
Sbjct: 891 AKCQVLVDSQKNIPNEWHLENSSKDEHLTSILKMIGISD 929
>AL132943-5|CAB81977.1| 367|Caenorhabditis elegans Hypothetical
protein Y116F11B.8 protein.
Length = 367
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = -1
Query: 323 TEHPLPLNP*FFLWHSSISCTSPLTKATVTSFPARLCVFANTSAGMDSNWFLDDQT 156
TE L P W+S + + T ATVTS F++ +DS+ D T
Sbjct: 238 TEPASTLGPVVIPWNSPGTSSKATTSATVTSLVLGPTTFSSAPQALDSSLAADPST 293
>AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical
protein Y42G9A.6b protein.
Length = 547
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -2
Query: 235 RPFLRASVFLRTRAREWTATGFLMTRPSLIILRMFCLELVLAI 107
RP AS F + RA W A+ ++ P+L+ ++ F +++AI
Sbjct: 262 RPRFGASFFQQIRALTWRASKTVLREPTLLKVQTF-QSIIIAI 303
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 27.1 bits (57), Expect = 4.0
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = -2
Query: 235 RPFLRASVFLRTRAREWTATGFLMTRPSLIILRMFCLELVLAI 107
RP AS F + RA W A+ ++ P+L+ ++ F +++AI
Sbjct: 399 RPRFGASFFQQIRALTWRASKTVLREPTLLKVQTF-QSIIIAI 440
>Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical
protein F20E11.7 protein.
Length = 357
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 39 RLAASVMRCGKKKVWLDPNEI 101
++A + + CG K+W DPN I
Sbjct: 171 QIAETSVTCGDDKIWQDPNGI 191
>Z72512-1|CAA96663.2| 326|Caenorhabditis elegans Hypothetical
protein R07B5.3 protein.
Length = 326
Score = 26.6 bits (56), Expect = 5.3
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 169 LMTRPSLIILRMFCLELVLAISLISFGSSHTFFLPHRITEAASLFCNFRELIL 11
L+ PS IL FC L A S++ + +F + LFC+ R LIL
Sbjct: 86 LVRIPSTTILTYFCATLDPAESIVPLLVAVYYFSNYSSQLYTVLFCSTRTLIL 138
>Z81537-11|CAB04377.2| 329|Caenorhabditis elegans Hypothetical
protein F41D3.6 protein.
Length = 329
Score = 26.2 bits (55), Expect = 7.0
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -1
Query: 194 AGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKPHL 75
AG DSN+ + + +DHL + G+ D W+K H+
Sbjct: 204 AGTDSNYTI---SAIDHLRSLYHGVIFIMSNDPKWVKVHI 240
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 135 IRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMP 284
I K++KD V+K +A+ R R + GK++G A +R P
Sbjct: 108 INKILKD-FVVKSRIALGYRVLFRPGWDCHGLPIELKIGKQQGNAGSRTP 156
>Z47811-4|CAD57701.1| 422|Caenorhabditis elegans Hypothetical
protein K02C4.5 protein.
Length = 422
Score = 26.2 bits (55), Expect = 7.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 7/49 (14%)
Frame = +3
Query: 111 ANTNSRQNIR-KMIKDGLVIKKPV------AVHSRARVRKNTEARRKGR 236
A +R ++R KM DG VI+KP ++HS K++E GR
Sbjct: 91 AMRETRSSLRTKMAVDGTVIEKPKRRHFFNSIHSHLNSTKHSETENSGR 139
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 206 ANTSAGMDSNWFLD--DQTILDHLTDVLSGISISDFIDLVW 90
++TS+ D N+ D DQ +L+ LT S+ D ++L W
Sbjct: 5 SSTSSEEDENFIKDVEDQKVLEVLTSHSKFKSLDDLVELRW 45
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 26.2 bits (55), Expect = 7.0
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +3
Query: 33 QKRLAASVMRCGKKKVWLDPNEI 101
Q ++A + + CG +W DPN I
Sbjct: 321 QAQIAETSVTCGSDAIWQDPNGI 343
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -1
Query: 206 ANTSAGMDSNWFLD--DQTILDHLTDVLSGISISDFIDLVW 90
++TS+ D N+ D DQ +L+ LT S+ D ++L W
Sbjct: 5 SSTSSEEDENFIKDVEDQKVLEVLTSHSKFKSLDDLVELRW 45
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +3
Query: 135 IRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFGKRRGTANARMP 284
I K++KD V+K +A+ R R + GK++G A +R P
Sbjct: 108 INKILKD-FVVKSRIALGYRVLFRPGWDCHGLPIELKIGKQQGNAGSRTP 156
>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
protein 1 protein.
Length = 1427
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/37 (21%), Positives = 20/37 (54%)
Frame = -1
Query: 182 SNWFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLF 72
+ WF+D +T +++ D++ +I W+ P ++
Sbjct: 528 AKWFVDAKTYMEYAADMMELAREEIYITDWWLSPEIY 564
>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
protein.
Length = 1427
Score = 25.8 bits (54), Expect = 9.3
Identities = 8/37 (21%), Positives = 20/37 (54%)
Frame = -1
Query: 182 SNWFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLF 72
+ WF+D +T +++ D++ +I W+ P ++
Sbjct: 528 AKWFVDAKTYMEYAADMMELAREEIYITDWWLSPEIY 564
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,129,129
Number of Sequences: 27780
Number of extensions: 149913
Number of successful extensions: 515
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 515
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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