Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0011_M01
(433 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB011123-1|BAA25477.2| 1385|Homo sapiens KIAA0551 protein protein. 31 1.7
AF448858-1|AAP97733.1| 67|Homo sapiens hypothetical short prot... 29 6.8
U53823-1|AAB00195.1| 522|Homo sapiens occludin protein. 29 9.0
U49184-1|AAC50451.1| 522|Homo sapiens occludin protein. 29 9.0
BC150256-1|AAI50257.1| 1360|Homo sapiens TRAF2 and NCK interacti... 29 9.0
BC029886-1|AAH29886.1| 522|Homo sapiens OCLN protein protein. 29 9.0
AF400630-1|AAL47094.1| 522|Homo sapiens occludin protein. 29 9.0
AF172271-1|AAF03789.1| 1268|Homo sapiens Traf2 and NCK interacti... 29 9.0
AF172270-1|AAF03788.1| 1297|Homo sapiens Traf2 and NCK interacti... 29 9.0
AF172269-1|AAF03787.1| 1323|Homo sapiens Traf2 and NCK interacti... 29 9.0
AF172268-1|AAF03786.1| 1276|Homo sapiens Traf2 and NCK interacti... 29 9.0
AF172267-1|AAF03785.1| 1352|Homo sapiens Traf2 and NCK interacti... 29 9.0
AF172266-1|AAF03784.1| 1305|Homo sapiens Traf2 and NCK interacti... 29 9.0
AF172265-1|AAF03783.1| 1331|Homo sapiens Traf2 and NCK interacti... 29 9.0
AF172264-1|AAF03782.1| 1360|Homo sapiens Traf2 and NCK interacti... 29 9.0
>AB011123-1|BAA25477.2| 1385|Homo sapiens KIAA0551 protein protein.
Length = 1385
Score = 31.1 bits (67), Expect = 1.7
Identities = 15/43 (34%), Positives = 26/43 (60%)
Frame = +1
Query: 175 VVTVDNKPVNAPSSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
+V ++ V+ S P RS D +ID++ R P G+ ++VEL+
Sbjct: 16 LVHFSSEEVDMASDSPARSLD--EIDLSALRDPAGIFELVELV 56
>AF448858-1|AAP97733.1| 67|Homo sapiens hypothetical short protein
protein.
Length = 67
Score = 29.1 bits (62), Expect = 6.8
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 226 RSFDWIKIDVTYFRTPPGLLKIVELILGILCMALGSPWYSTWFVF 360
+ F W+ + T F T +LKIV+L+L LC GS W ++ +F
Sbjct: 2 KCFMWLIL--TSF-TLTSMLKIVQLLLLPLCFLSGSRWVPSYNIF 43
>U53823-1|AAB00195.1| 522|Homo sapiens occludin protein.
Length = 522
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 163 APETVVTVDNKPVNAPSSQPGRSFDWIKIDVTYF---RTPPGLLKIVELILGILCMAL 327
AP + V SQP SF + + ++ +F +PPG+++I+ +++ ++C+A+
Sbjct: 23 APSNDIYGGEMHVRPMLSQPAYSF-YPEDEILHFYKWTSPPGVIRILSMLIIVMCIAI 79
>U49184-1|AAC50451.1| 522|Homo sapiens occludin protein.
Length = 522
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 163 APETVVTVDNKPVNAPSSQPGRSFDWIKIDVTYF---RTPPGLLKIVELILGILCMAL 327
AP + V SQP SF + + ++ +F +PPG+++I+ +++ ++C+A+
Sbjct: 23 APSNDIYGGEMHVRPMLSQPAYSF-YPEDEILHFYKWTSPPGVIRILSMLIIVMCIAI 79
>BC150256-1|AAI50257.1| 1360|Homo sapiens TRAF2 and NCK interacting
kinase protein.
Length = 1360
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 211 SSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
S P RS D +ID++ R P G+ ++VEL+
Sbjct: 3 SDSPARSLD--EIDLSALRDPAGIFELVELV 31
>BC029886-1|AAH29886.1| 522|Homo sapiens OCLN protein protein.
Length = 522
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 163 APETVVTVDNKPVNAPSSQPGRSFDWIKIDVTYF---RTPPGLLKIVELILGILCMAL 327
AP + V SQP SF + + ++ +F +PPG+++I+ +++ ++C+A+
Sbjct: 23 APSNDIYGGEMHVRPMLSQPAYSF-YPEDEILHFYKWTSPPGVIRILSMLIIVMCIAI 79
>AF400630-1|AAL47094.1| 522|Homo sapiens occludin protein.
Length = 522
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 163 APETVVTVDNKPVNAPSSQPGRSFDWIKIDVTYF---RTPPGLLKIVELILGILCMAL 327
AP + V SQP SF + + ++ +F +PPG+++I+ +++ ++C+A+
Sbjct: 23 APSNDIYGGEMHVRPMLSQPAYSF-YPEDEILHFYKWTSPPGVIRILSMLIIVMCIAI 79
>AF172271-1|AAF03789.1| 1268|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 8 protein.
Length = 1268
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 211 SSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
S P RS D +ID++ R P G+ ++VEL+
Sbjct: 3 SDSPARSLD--EIDLSALRDPAGIFELVELV 31
>AF172270-1|AAF03788.1| 1297|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 7 protein.
Length = 1297
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 211 SSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
S P RS D +ID++ R P G+ ++VEL+
Sbjct: 3 SDSPARSLD--EIDLSALRDPAGIFELVELV 31
>AF172269-1|AAF03787.1| 1323|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 6 protein.
Length = 1323
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 211 SSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
S P RS D +ID++ R P G+ ++VEL+
Sbjct: 3 SDSPARSLD--EIDLSALRDPAGIFELVELV 31
>AF172268-1|AAF03786.1| 1276|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 5 protein.
Length = 1276
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 211 SSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
S P RS D +ID++ R P G+ ++VEL+
Sbjct: 3 SDSPARSLD--EIDLSALRDPAGIFELVELV 31
>AF172267-1|AAF03785.1| 1352|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 4 protein.
Length = 1352
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 211 SSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
S P RS D +ID++ R P G+ ++VEL+
Sbjct: 3 SDSPARSLD--EIDLSALRDPAGIFELVELV 31
>AF172266-1|AAF03784.1| 1305|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 3 protein.
Length = 1305
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 211 SSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
S P RS D +ID++ R P G+ ++VEL+
Sbjct: 3 SDSPARSLD--EIDLSALRDPAGIFELVELV 31
>AF172265-1|AAF03783.1| 1331|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 2 protein.
Length = 1331
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 211 SSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
S P RS D +ID++ R P G+ ++VEL+
Sbjct: 3 SDSPARSLD--EIDLSALRDPAGIFELVELV 31
>AF172264-1|AAF03782.1| 1360|Homo sapiens Traf2 and NCK interacting
kinase, splice variant 1 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 9.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 211 SSQPGRSFDWIKIDVTYFRTPPGLLKIVELI 303
S P RS D +ID++ R P G+ ++VEL+
Sbjct: 3 SDSPARSLD--EIDLSALRDPAGIFELVELV 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,878,254
Number of Sequences: 237096
Number of extensions: 1406614
Number of successful extensions: 8005
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8005
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3430805640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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